RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 RIMS2Q9UQ26 1411 aa28.01■■■□□ 2.08
NUP50-207ENST00000424634 SENP3Q9H4L4 574 aaPredicted RBP28.01■■■□□ 2.07
NUP50-207ENST00000424634 XIRP1Q702N8 1843 aaKnown RBP28.01■■■□□ 2.07
NUP50-207ENST00000424634 KCNA6P17658 529 aa27.98■■■□□ 2.07
NUP50-207ENST00000424634 HSPA1LP34931 641 aa27.98■■■□□ 2.07
NUP50-207ENST00000424634 BCANQ96GW7 911 aa27.97■■■□□ 2.07
NUP50-207ENST00000424634 HDGFP51858 240 aaKnown RBP27.96■■■□□ 2.07
NUP50-207ENST00000424634 DISP3Q9P2K9 1392 aa27.96■■■□□ 2.07
NUP50-207ENST00000424634 PLEKHG1Q9ULL1 1385 aa27.96■■■□□ 2.07
NUP50-207ENST00000424634 NUTM2DQ5VT03 806 aaPredicted RBP27.95■■■□□ 2.06
NUP50-207ENST00000424634 PPP1R15AO75807 674 aaPredicted RBP27.93■■■□□ 2.06
NUP50-207ENST00000424634 SPHKAPQ2M3C7 1700 aa27.92■■■□□ 2.06
NUP50-207ENST00000424634 HFM1A2PYH4 1435 aa27.92■■■□□ 2.06
NUP50-207ENST00000424634 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.91■■■□□ 2.06
NUP50-207ENST00000424634 RBM33Q96EV2 1170 aaKnown RBP27.9■■■□□ 2.06
NUP50-207ENST00000424634 TMEM94Q12767 1356 aa27.89■■■□□ 2.06
NUP50-207ENST00000424634 PROSER2Q86WR7 435 aaPredicted RBP27.89■■■□□ 2.06
NUP50-207ENST00000424634 NWD1Q149M9 1564 aa27.88■■■□□ 2.05
NUP50-207ENST00000424634 CHD2O14647 1828 aaKnown RBP27.88■■■□□ 2.05
NUP50-207ENST00000424634 TBX22Q9Y458 520 aa27.87■■■□□ 2.05
NUP50-207ENST00000424634 ADAMTS13Q76LX8 1427 aa27.85■■■□□ 2.05
NUP50-207ENST00000424634 TRIM52Q96A61 297 aa27.85■■■□□ 2.05
NUP50-207ENST00000424634 ILDR2Q71H61 639 aa27.84■■■□□ 2.05
NUP50-207ENST00000424634 NKTRP30414 1462 aaKnown RBP27.83■■■□□ 2.04
NUP50-207ENST00000424634 CLTCL1P53675 1640 aa27.81■■■□□ 2.04
NUP50-207ENST00000424634 TRPM2O94759 1503 aa27.79■■■□□ 2.04
NUP50-207ENST00000424634 ZNF326Q5BKZ1 582 aaKnown RBP27.77■■■□□ 2.04
NUP50-207ENST00000424634 SLC4A1APQ9BWU0 796 aaKnown RBP27.76■■■□□ 2.03
NUP50-207ENST00000424634 DIP2AQ14689 1571 aa27.75■■■□□ 2.03
NUP50-207ENST00000424634 NRXN3Q9Y4C0 1643 aa27.73■■■□□ 2.03
NUP50-207ENST00000424634 FAM135BQ49AJ0 1406 aa27.73■■■□□ 2.03
NUP50-207ENST00000424634 PIK3R4Q99570 1358 aa27.73■■■□□ 2.03
NUP50-207ENST00000424634 KIF1BO60333 1816 aa27.72■■■□□ 2.03
NUP50-207ENST00000424634 PTPRUQ92729 1446 aa27.71■■■□□ 2.03
NUP50-207ENST00000424634 NEXMIFQ5QGS0 1516 aa27.7■■■□□ 2.02
NUP50-207ENST00000424634 MSH6P52701 1360 aa27.7■■■□□ 2.02
NUP50-207ENST00000424634 SETBP1Q9Y6X0 1596 aa27.69■■■□□ 2.02
NUP50-207ENST00000424634 FOXD1Q16676 465 aa27.69■■■□□ 2.02
NUP50-207ENST00000424634 AMOTL2Q9Y2J4 779 aa27.69■■■□□ 2.02
NUP50-207ENST00000424634 MED1Q15648 1581 aaPredicted RBP27.69■■■□□ 2.02
NUP50-207ENST00000424634 NCOA3Q9Y6Q9 1424 aa27.66■■■□□ 2.02
NUP50-207ENST00000424634 ROBO1Q9Y6N7 1651 aa27.65■■■□□ 2.02
NUP50-207ENST00000424634 SLAIN2Q9P270 581 aa27.65■■■□□ 2.02
NUP50-207ENST00000424634 METP08581 1390 aa27.64■■■□□ 2.02
NUP50-207ENST00000424634 MPHOSPH9Q99550 1183 aa27.62■■■□□ 2.01
NUP50-207ENST00000424634 C14orf37Q86TY3 774 aa27.6■■■□□ 2.01
NUP50-207ENST00000424634 XRN1Q8IZH2 1706 aaKnown RBP27.59■■■□□ 2.01
NUP50-207ENST00000424634 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.59■■■□□ 2.01
NUP50-207ENST00000424634 C19orf44Q9H6X5 657 aa27.59■■■□□ 2.01
NUP50-207ENST00000424634 VGFO15240 615 aaPredicted RBP27.56■■■□□ 2
NUP50-207ENST00000424634 RPGRIP1LQ68CZ1 1315 aa27.56■■■□□ 2
NUP50-207ENST00000424634 SETD5Q9C0A6 1442 aa27.56■■■□□ 2
NUP50-207ENST00000424634 SOCS7O14512 581 aa27.54■■■□□ 2
NUP50-207ENST00000424634 PPLO60437 1756 aa27.53■■■□□ 2
NUP50-207ENST00000424634 CADPS2Q86UW7 1296 aa27.53■■■□□ 2
NUP50-207ENST00000424634 ATF3P18847 181 aa27.52■■■□□ 2
NUP50-207ENST00000424634 SETD1AO15047 1707 aaKnown RBP27.51■■□□□ 1.99
NUP50-207ENST00000424634 CCDC144AA2RUR9 1427 aa27.5■■□□□ 1.99
NUP50-207ENST00000424634 PHLPP1O60346 1717 aa27.48■■□□□ 1.99
NUP50-207ENST00000424634 SPATA31E1Q6ZUB1 1445 aa27.48■■□□□ 1.99
NUP50-207ENST00000424634 RGL3Q3MIN7 710 aa27.47■■□□□ 1.99
NUP50-207ENST00000424634 PHF23Q9BUL5 403 aaPredicted RBP27.47■■□□□ 1.99
NUP50-207ENST00000424634 RAB3GAP2Q9H2M9 1393 aa27.46■■□□□ 1.99
NUP50-207ENST00000424634 ACIN1Q9UKV3 1341 aaKnown RBP27.45■■□□□ 1.99
NUP50-207ENST00000424634 ADGRF5Q8IZF2 1346 aa27.44■■□□□ 1.98
NUP50-207ENST00000424634 DCCP43146 1447 aa27.43■■□□□ 1.98
NUP50-207ENST00000424634 RGS17Q9UGC6 210 aaPredicted RBP27.42■■□□□ 1.98
NUP50-207ENST00000424634 COL16A1Q07092 1604 aaPredicted RBP27.41■■□□□ 1.98
NUP50-207ENST00000424634 BRINP3Q76B58 766 aa27.41■■□□□ 1.98
NUP50-207ENST00000424634 ROBO2Q9HCK4 1378 aa27.4■■□□□ 1.98
NUP50-207ENST00000424634 IFT172Q9UG01 1749 aa27.4■■□□□ 1.98
NUP50-207ENST00000424634 ADGRL3Q9HAR2 1447 aa27.4■■□□□ 1.98
NUP50-207ENST00000424634 NALCNQ8IZF0 1738 aa27.39■■□□□ 1.98
NUP50-207ENST00000424634 MST1RQ04912 1400 aa27.39■■□□□ 1.97
NUP50-207ENST00000424634 AHDC1Q5TGY3 1603 aaPredicted RBP27.38■■□□□ 1.97
NUP50-207ENST00000424634 JCADQ9P266 1359 aa27.37■■□□□ 1.97
NUP50-207ENST00000424634 PTCH1Q13635 1447 aa27.37■■□□□ 1.97
NUP50-207ENST00000424634 ANKRD30BQ9BXX2 1392 aa27.35■■□□□ 1.97
NUP50-207ENST00000424634 PRAG1Q86YV5 1406 aa27.35■■□□□ 1.97
NUP50-207ENST00000424634 ASXL1Q8IXJ9 1541 aa27.31■■□□□ 1.96
NUP50-207ENST00000424634 TMEM132EQ6IEE7 984 aa27.29■■□□□ 1.96
NUP50-207ENST00000424634 PIK3C2GO75747 1445 aa27.28■■□□□ 1.96
NUP50-207ENST00000424634 HRCP23327 699 aa27.27■■□□□ 1.96
NUP50-207ENST00000424634 DDX17Q92841 729 aaKnown RBP27.27■■□□□ 1.96
NUP50-207ENST00000424634 STK26Q9P289 416 aa27.27■■□□□ 1.96
NUP50-207ENST00000424634 NHSL1Q5SYE7 1610 aa27.27■■□□□ 1.96
NUP50-207ENST00000424634 C1orf167Q5SNV9 1468 aa27.26■■□□□ 1.95
NUP50-207ENST00000424634 POTEAQ6S8J7 498 aa27.25■■□□□ 1.95
NUP50-207ENST00000424634 SHPRHQ149N8 1683 aa27.24■■□□□ 1.95
NUP50-207ENST00000424634 LRP6O75581 1613 aa27.23■■□□□ 1.95
NUP50-207ENST00000424634 LRPPRCP42704 1394 aaKnown RBP27.23■■□□□ 1.95
NUP50-207ENST00000424634 SPATA31A6Q5VVP1 1343 aa27.23■■□□□ 1.95
NUP50-207ENST00000424634 WAPLQ7Z5K2 1190 aa27.23■■□□□ 1.95
NUP50-207ENST00000424634 ORAI2Q96SN7 254 aa27.22■■□□□ 1.95
NUP50-207ENST00000424634 C14orf93Q9H972 538 aaKnown RBP27.22■■□□□ 1.95
NUP50-207ENST00000424634 TECPR2O15040 1411 aa27.22■■□□□ 1.95
NUP50-207ENST00000424634 ABCC11Q96J66 1382 aa27.22■■□□□ 1.95
NUP50-207ENST00000424634 NRXN1Q9ULB1 1477 aa27.21■■□□□ 1.95
NUP50-207ENST00000424634 CFAP70Q5T0N1 1121 aa27.19■■□□□ 1.94
NUP50-207ENST00000424634 MYOM2P54296 1465 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms