RNA–Protein interactions for RNA: ENST00000423898.1

SMIM12-202, Transcript of small integral membrane protein 12, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM12, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-202ENST00000423898 BCANQ96GW7 911 aa32.1■■■□□ 2.73
SMIM12-202ENST00000423898 HSPA1LP34931 641 aa32.09■■■□□ 2.73
SMIM12-202ENST00000423898 SENP3Q9H4L4 574 aaPredicted RBP32.09■■■□□ 2.73
SMIM12-202ENST00000423898 ZFYVE9O95405 1425 aa32.09■■■□□ 2.73
SMIM12-202ENST00000423898 RIMS2Q9UQ26 1411 aa32.08■■■□□ 2.73
SMIM12-202ENST00000423898 PPP1R15AO75807 674 aaPredicted RBP32.06■■■□□ 2.72
SMIM12-202ENST00000423898 HDGFP51858 240 aaKnown RBP32.02■■■□□ 2.72
SMIM12-202ENST00000423898 SPHKAPQ2M3C7 1700 aa32.01■■■□□ 2.72
SMIM12-202ENST00000423898 KCNA6P17658 529 aa32.01■■■□□ 2.71
SMIM12-202ENST00000423898 PLEKHG1Q9ULL1 1385 aa32.01■■■□□ 2.71
SMIM12-202ENST00000423898 NAIPQ13075 1403 aa31.99■■■□□ 2.71
SMIM12-202ENST00000423898 NWD1Q149M9 1564 aa31.98■■■□□ 2.71
SMIM12-202ENST00000423898 TMEM94Q12767 1356 aa31.96■■■□□ 2.71
SMIM12-202ENST00000423898 NUTM2DQ5VT03 806 aaPredicted RBP31.96■■■□□ 2.71
SMIM12-202ENST00000423898 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.96■■■□□ 2.71
SMIM12-202ENST00000423898 ILDR2Q71H61 639 aa31.95■■■□□ 2.71
SMIM12-202ENST00000423898 PROSER2Q86WR7 435 aaPredicted RBP31.95■■■□□ 2.71
SMIM12-202ENST00000423898 NKTRP30414 1462 aaKnown RBP31.95■■■□□ 2.7
SMIM12-202ENST00000423898 CHD2O14647 1828 aaKnown RBP31.93■■■□□ 2.7
SMIM12-202ENST00000423898 RBM33Q96EV2 1170 aaKnown RBP31.92■■■□□ 2.7
SMIM12-202ENST00000423898 HFM1A2PYH4 1435 aa31.88■■■□□ 2.69
SMIM12-202ENST00000423898 MED1Q15648 1581 aaPredicted RBP31.88■■■□□ 2.69
SMIM12-202ENST00000423898 DIP2AQ14689 1571 aa31.86■■■□□ 2.69
SMIM12-202ENST00000423898 TBX22Q9Y458 520 aa31.85■■■□□ 2.69
SMIM12-202ENST00000423898 ADAMTS13Q76LX8 1427 aa31.84■■■□□ 2.69
SMIM12-202ENST00000423898 TRIM52Q96A61 297 aa31.84■■■□□ 2.69
SMIM12-202ENST00000423898 CLTCL1P53675 1640 aa31.84■■■□□ 2.69
SMIM12-202ENST00000423898 TRPM2O94759 1503 aa31.82■■■□□ 2.68
SMIM12-202ENST00000423898 ZNF326Q5BKZ1 582 aaKnown RBP31.82■■■□□ 2.68
SMIM12-202ENST00000423898 MSH6P52701 1360 aa31.8■■■□□ 2.68
SMIM12-202ENST00000423898 KIF1BO60333 1816 aa31.79■■■□□ 2.68
SMIM12-202ENST00000423898 ROBO1Q9Y6N7 1651 aa31.77■■■□□ 2.68
SMIM12-202ENST00000423898 FAM135BQ49AJ0 1406 aa31.76■■■□□ 2.68
SMIM12-202ENST00000423898 PIK3R4Q99570 1358 aa31.74■■■□□ 2.67
SMIM12-202ENST00000423898 NRXN3Q9Y4C0 1643 aa31.74■■■□□ 2.67
SMIM12-202ENST00000423898 SLC4A1APQ9BWU0 796 aaKnown RBP31.72■■■□□ 2.67
SMIM12-202ENST00000423898 SETBP1Q9Y6X0 1596 aa31.72■■■□□ 2.67
SMIM12-202ENST00000423898 C14orf37Q86TY3 774 aa31.71■■■□□ 2.67
SMIM12-202ENST00000423898 NEXMIFQ5QGS0 1516 aa31.7■■■□□ 2.67
SMIM12-202ENST00000423898 SOCS7O14512 581 aa31.68■■■□□ 2.66
SMIM12-202ENST00000423898 PTPRUQ92729 1446 aa31.67■■■□□ 2.66
SMIM12-202ENST00000423898 AMOTL2Q9Y2J4 779 aa31.67■■■□□ 2.66
SMIM12-202ENST00000423898 NCOA3Q9Y6Q9 1424 aa31.66■■■□□ 2.66
SMIM12-202ENST00000423898 PHF23Q9BUL5 403 aaPredicted RBP31.66■■■□□ 2.66
SMIM12-202ENST00000423898 SLAIN2Q9P270 581 aa31.65■■■□□ 2.66
SMIM12-202ENST00000423898 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.64■■■□□ 2.66
SMIM12-202ENST00000423898 XRN1Q8IZH2 1706 aaKnown RBP31.63■■■□□ 2.65
SMIM12-202ENST00000423898 PHLPP1O60346 1717 aa31.6■■■□□ 2.65
SMIM12-202ENST00000423898 METP08581 1390 aa31.59■■■□□ 2.65
SMIM12-202ENST00000423898 FOXD1Q16676 465 aa31.58■■■□□ 2.65
SMIM12-202ENST00000423898 C19orf44Q9H6X5 657 aa31.57■■■□□ 2.64
SMIM12-202ENST00000423898 ATF3P18847 181 aa31.56■■■□□ 2.64
SMIM12-202ENST00000423898 CADPS2Q86UW7 1296 aa31.55■■■□□ 2.64
SMIM12-202ENST00000423898 PPLO60437 1756 aa31.53■■■□□ 2.64
SMIM12-202ENST00000423898 VGFO15240 615 aaPredicted RBP31.52■■■□□ 2.64
SMIM12-202ENST00000423898 SETD1AO15047 1707 aaKnown RBP31.49■■■□□ 2.63
SMIM12-202ENST00000423898 MPHOSPH9Q99550 1183 aa31.49■■■□□ 2.63
SMIM12-202ENST00000423898 CCDC144AA2RUR9 1427 aa31.49■■■□□ 2.63
SMIM12-202ENST00000423898 RPGRIP1LQ68CZ1 1315 aa31.49■■■□□ 2.63
SMIM12-202ENST00000423898 COL16A1Q07092 1604 aaPredicted RBP31.46■■■□□ 2.63
SMIM12-202ENST00000423898 DCCP43146 1447 aa31.46■■■□□ 2.63
SMIM12-202ENST00000423898 NALCNQ8IZF0 1738 aa31.44■■■□□ 2.62
SMIM12-202ENST00000423898 SETD5Q9C0A6 1442 aa31.43■■■□□ 2.62
SMIM12-202ENST00000423898 AHDC1Q5TGY3 1603 aaPredicted RBP31.42■■■□□ 2.62
SMIM12-202ENST00000423898 JCADQ9P266 1359 aa31.42■■■□□ 2.62
SMIM12-202ENST00000423898 ADGRL3Q9HAR2 1447 aa31.41■■■□□ 2.62
SMIM12-202ENST00000423898 RGL3Q3MIN7 710 aa31.39■■■□□ 2.62
SMIM12-202ENST00000423898 BRINP3Q76B58 766 aa31.38■■■□□ 2.61
SMIM12-202ENST00000423898 RGS17Q9UGC6 210 aaPredicted RBP31.37■■■□□ 2.61
SMIM12-202ENST00000423898 MST1RQ04912 1400 aa31.37■■■□□ 2.61
SMIM12-202ENST00000423898 PTCH1Q13635 1447 aa31.37■■■□□ 2.61
SMIM12-202ENST00000423898 IFT172Q9UG01 1749 aa31.37■■■□□ 2.61
SMIM12-202ENST00000423898 SPATA31E1Q6ZUB1 1445 aa31.36■■■□□ 2.61
SMIM12-202ENST00000423898 ACIN1Q9UKV3 1341 aaKnown RBP31.36■■■□□ 2.61
SMIM12-202ENST00000423898 ASXL1Q8IXJ9 1541 aa31.35■■■□□ 2.61
SMIM12-202ENST00000423898 RAB3GAP2Q9H2M9 1393 aa31.33■■■□□ 2.61
SMIM12-202ENST00000423898 ROBO2Q9HCK4 1378 aa31.33■■■□□ 2.61
SMIM12-202ENST00000423898 ADGRF5Q8IZF2 1346 aa31.32■■■□□ 2.6
SMIM12-202ENST00000423898 SHPRHQ149N8 1683 aa31.3■■■□□ 2.6
SMIM12-202ENST00000423898 ANKRD30BQ9BXX2 1392 aa31.3■■■□□ 2.6
SMIM12-202ENST00000423898 NHSL1Q5SYE7 1610 aa31.29■■■□□ 2.6
SMIM12-202ENST00000423898 PRAG1Q86YV5 1406 aa31.28■■■□□ 2.6
SMIM12-202ENST00000423898 SPATA31A6Q5VVP1 1343 aa31.25■■■□□ 2.59
SMIM12-202ENST00000423898 LRP6O75581 1613 aa31.24■■■□□ 2.59
SMIM12-202ENST00000423898 C1orf167Q5SNV9 1468 aa31.22■■■□□ 2.59
SMIM12-202ENST00000423898 POTEAQ6S8J7 498 aa31.22■■■□□ 2.59
SMIM12-202ENST00000423898 MEX3CQ5U5Q3 659 aaKnown RBP31.21■■■□□ 2.59
SMIM12-202ENST00000423898 PIK3C2GO75747 1445 aa31.21■■■□□ 2.59
SMIM12-202ENST00000423898 DDX17Q92841 729 aaKnown RBP31.19■■■□□ 2.58
SMIM12-202ENST00000423898 STK26Q9P289 416 aa31.19■■■□□ 2.58
SMIM12-202ENST00000423898 KNDC1Q76NI1 1749 aa31.16■■■□□ 2.58
SMIM12-202ENST00000423898 NUTM2BA6NNL0 878 aaPredicted RBP31.15■■■□□ 2.58
SMIM12-202ENST00000423898 NUTM2EB1AL46 878 aaPredicted RBP31.15■■■□□ 2.58
SMIM12-202ENST00000423898 TMEM132EQ6IEE7 984 aa31.15■■■□□ 2.58
SMIM12-202ENST00000423898 NUTM2AQ8IVF1 878 aaPredicted RBP31.15■■■□□ 2.58
SMIM12-202ENST00000423898 LRPPRCP42704 1394 aaKnown RBP31.15■■■□□ 2.58
SMIM12-202ENST00000423898 CDC42BPGQ6DT37 1551 aa31.13■■■□□ 2.57
SMIM12-202ENST00000423898 LRRC59Q96AG4 307 aaKnown RBP31.13■■■□□ 2.57
SMIM12-202ENST00000423898 TECPR2O15040 1411 aa31.13■■■□□ 2.57
SMIM12-202ENST00000423898 ORAI2Q96SN7 254 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms