RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 HDGFP51858 240 aaKnown RBP38.66■■■■□ 3.78
SMDT1-202ENST00000422252 NAIPQ13075 1403 aa38.65■■■■□ 3.78
SMDT1-202ENST00000422252 DISP3Q9P2K9 1392 aa38.65■■■■□ 3.78
SMDT1-202ENST00000422252 BCANQ96GW7 911 aa38.64■■■■□ 3.78
SMDT1-202ENST00000422252 PLEKHG1Q9ULL1 1385 aa38.62■■■■□ 3.77
SMDT1-202ENST00000422252 PPP1R15AO75807 674 aaPredicted RBP38.62■■■■□ 3.77
SMDT1-202ENST00000422252 KCNA6P17658 529 aa38.62■■■■□ 3.77
SMDT1-202ENST00000422252 HSPA1LP34931 641 aa38.6■■■■□ 3.77
SMDT1-202ENST00000422252 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.59■■■■□ 3.77
SMDT1-202ENST00000422252 XIRP1Q702N8 1843 aaKnown RBP38.55■■■■□ 3.76
SMDT1-202ENST00000422252 SENP3Q9H4L4 574 aaPredicted RBP38.55■■■■□ 3.76
SMDT1-202ENST00000422252 HFM1A2PYH4 1435 aa38.55■■■■□ 3.76
SMDT1-202ENST00000422252 SPHKAPQ2M3C7 1700 aa38.53■■■■□ 3.76
SMDT1-202ENST00000422252 NWD1Q149M9 1564 aa38.52■■■■□ 3.76
SMDT1-202ENST00000422252 TMEM94Q12767 1356 aa38.51■■■■□ 3.76
SMDT1-202ENST00000422252 NKTRP30414 1462 aaKnown RBP38.49■■■■□ 3.75
SMDT1-202ENST00000422252 NUTM2DQ5VT03 806 aaPredicted RBP38.49■■■■□ 3.75
SMDT1-202ENST00000422252 PROSER2Q86WR7 435 aaPredicted RBP38.49■■■■□ 3.75
SMDT1-202ENST00000422252 TBX22Q9Y458 520 aa38.45■■■■□ 3.75
SMDT1-202ENST00000422252 TRIM52Q96A61 297 aa38.43■■■■□ 3.74
SMDT1-202ENST00000422252 ADAMTS13Q76LX8 1427 aa38.41■■■■□ 3.74
SMDT1-202ENST00000422252 CHD2O14647 1828 aaKnown RBP38.4■■■■□ 3.74
SMDT1-202ENST00000422252 RBM33Q96EV2 1170 aaKnown RBP38.4■■■■□ 3.74
SMDT1-202ENST00000422252 DIP2AQ14689 1571 aa38.39■■■■□ 3.74
SMDT1-202ENST00000422252 TRPM2O94759 1503 aa38.38■■■■□ 3.74
SMDT1-202ENST00000422252 CLTCL1P53675 1640 aa38.35■■■■□ 3.73
SMDT1-202ENST00000422252 ZNF326Q5BKZ1 582 aaKnown RBP38.35■■■■□ 3.73
SMDT1-202ENST00000422252 ILDR2Q71H61 639 aa38.35■■■■□ 3.73
SMDT1-202ENST00000422252 PIK3R4Q99570 1358 aa38.31■■■■□ 3.72
SMDT1-202ENST00000422252 SLC4A1APQ9BWU0 796 aaKnown RBP38.31■■■■□ 3.72
SMDT1-202ENST00000422252 MSH6P52701 1360 aa38.3■■■■□ 3.72
SMDT1-202ENST00000422252 FAM135BQ49AJ0 1406 aa38.29■■■■□ 3.72
SMDT1-202ENST00000422252 MED1Q15648 1581 aaPredicted RBP38.26■■■■□ 3.72
SMDT1-202ENST00000422252 SETBP1Q9Y6X0 1596 aa38.24■■■■□ 3.71
SMDT1-202ENST00000422252 KIF1BO60333 1816 aa38.24■■■■□ 3.71
SMDT1-202ENST00000422252 NCOA3Q9Y6Q9 1424 aa38.23■■■■□ 3.71
SMDT1-202ENST00000422252 NRXN3Q9Y4C0 1643 aa38.23■■■■□ 3.71
SMDT1-202ENST00000422252 NEXMIFQ5QGS0 1516 aa38.22■■■■□ 3.71
SMDT1-202ENST00000422252 AMOTL2Q9Y2J4 779 aa38.2■■■■□ 3.71
SMDT1-202ENST00000422252 PTPRUQ92729 1446 aa38.19■■■■□ 3.7
SMDT1-202ENST00000422252 ROBO1Q9Y6N7 1651 aa38.17■■■■□ 3.7
SMDT1-202ENST00000422252 C14orf37Q86TY3 774 aa38.15■■■■□ 3.7
SMDT1-202ENST00000422252 SLAIN2Q9P270 581 aa38.15■■■■□ 3.7
SMDT1-202ENST00000422252 METP08581 1390 aa38.1■■■■□ 3.69
SMDT1-202ENST00000422252 FOXD1Q16676 465 aa38.1■■■■□ 3.69
SMDT1-202ENST00000422252 C19orf44Q9H6X5 657 aa38.09■■■■□ 3.69
SMDT1-202ENST00000422252 XRN1Q8IZH2 1706 aaKnown RBP38.09■■■■□ 3.69
SMDT1-202ENST00000422252 VGFO15240 615 aaPredicted RBP38.07■■■■□ 3.68
SMDT1-202ENST00000422252 RPGRIP1LQ68CZ1 1315 aa38.07■■■■□ 3.68
SMDT1-202ENST00000422252 MPHOSPH9Q99550 1183 aa38.06■■■■□ 3.68
SMDT1-202ENST00000422252 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.05■■■■□ 3.68
SMDT1-202ENST00000422252 SOCS7O14512 581 aa38.05■■■■□ 3.68
SMDT1-202ENST00000422252 CADPS2Q86UW7 1296 aa38.04■■■■□ 3.68
SMDT1-202ENST00000422252 ATF3P18847 181 aa38.03■■■■□ 3.68
SMDT1-202ENST00000422252 PHF23Q9BUL5 403 aaPredicted RBP38.02■■■■□ 3.68
SMDT1-202ENST00000422252 ACIN1Q9UKV3 1341 aaKnown RBP38.02■■■■□ 3.68
SMDT1-202ENST00000422252 SETD5Q9C0A6 1442 aa38.02■■■■□ 3.68
SMDT1-202ENST00000422252 CCDC144AA2RUR9 1427 aa38■■■■□ 3.67
SMDT1-202ENST00000422252 PPLO60437 1756 aa37.96■■■■□ 3.67
SMDT1-202ENST00000422252 DCCP43146 1447 aa37.95■■■■□ 3.67
SMDT1-202ENST00000422252 PHLPP1O60346 1717 aa37.94■■■■□ 3.66
SMDT1-202ENST00000422252 SETD1AO15047 1707 aaKnown RBP37.91■■■■□ 3.66
SMDT1-202ENST00000422252 SPATA31E1Q6ZUB1 1445 aa37.88■■■■□ 3.66
SMDT1-202ENST00000422252 RGL3Q3MIN7 710 aa37.87■■■■□ 3.65
SMDT1-202ENST00000422252 RAB3GAP2Q9H2M9 1393 aa37.86■■■■□ 3.65
SMDT1-202ENST00000422252 ADGRL3Q9HAR2 1447 aa37.86■■■■□ 3.65
SMDT1-202ENST00000422252 PTCH1Q13635 1447 aa37.84■■■■□ 3.65
SMDT1-202ENST00000422252 COL16A1Q07092 1604 aaPredicted RBP37.83■■■■□ 3.65
SMDT1-202ENST00000422252 JCADQ9P266 1359 aa37.83■■■■□ 3.65
SMDT1-202ENST00000422252 AHDC1Q5TGY3 1603 aaPredicted RBP37.82■■■■□ 3.64
SMDT1-202ENST00000422252 MST1RQ04912 1400 aa37.81■■■■□ 3.64
SMDT1-202ENST00000422252 BRINP3Q76B58 766 aa37.81■■■■□ 3.64
SMDT1-202ENST00000422252 ADGRF5Q8IZF2 1346 aa37.81■■■■□ 3.64
SMDT1-202ENST00000422252 ANKRD30BQ9BXX2 1392 aa37.8■■■■□ 3.64
SMDT1-202ENST00000422252 PRAG1Q86YV5 1406 aa37.79■■■■□ 3.64
SMDT1-202ENST00000422252 NALCNQ8IZF0 1738 aa37.79■■■■□ 3.64
SMDT1-202ENST00000422252 ROBO2Q9HCK4 1378 aa37.79■■■■□ 3.64
SMDT1-202ENST00000422252 IFT172Q9UG01 1749 aa37.76■■■■□ 3.64
SMDT1-202ENST00000422252 RGS17Q9UGC6 210 aaPredicted RBP37.76■■■■□ 3.64
SMDT1-202ENST00000422252 ASXL1Q8IXJ9 1541 aa37.74■■■■□ 3.63
SMDT1-202ENST00000422252 PIK3C2GO75747 1445 aa37.67■■■■□ 3.62
SMDT1-202ENST00000422252 SPATA31A6Q5VVP1 1343 aa37.65■■■■□ 3.62
SMDT1-202ENST00000422252 NHSL1Q5SYE7 1610 aa37.63■■■■□ 3.61
SMDT1-202ENST00000422252 C1orf167Q5SNV9 1468 aa37.63■■■■□ 3.61
SMDT1-202ENST00000422252 SHPRHQ149N8 1683 aa37.63■■■■□ 3.61
SMDT1-202ENST00000422252 HRCP23327 699 aa37.62■■■■□ 3.61
SMDT1-202ENST00000422252 LRPPRCP42704 1394 aaKnown RBP37.6■■■■□ 3.61
SMDT1-202ENST00000422252 TECPR2O15040 1411 aa37.6■■■■□ 3.61
SMDT1-202ENST00000422252 STK26Q9P289 416 aa37.59■■■■□ 3.61
SMDT1-202ENST00000422252 LRP6O75581 1613 aa37.58■■■■□ 3.61
SMDT1-202ENST00000422252 TMEM132EQ6IEE7 984 aa37.57■■■■□ 3.6
SMDT1-202ENST00000422252 MYOM2P54296 1465 aa37.56■■■■□ 3.6
SMDT1-202ENST00000422252 NRXN1Q9ULB1 1477 aa37.56■■■■□ 3.6
SMDT1-202ENST00000422252 ABCC11Q96J66 1382 aa37.55■■■■□ 3.6
SMDT1-202ENST00000422252 POTEAQ6S8J7 498 aa37.55■■■■□ 3.6
SMDT1-202ENST00000422252 DDX17Q92841 729 aaKnown RBP37.54■■■■□ 3.6
SMDT1-202ENST00000422252 LRRC59Q96AG4 307 aaKnown RBP37.54■■■■□ 3.6
SMDT1-202ENST00000422252 C14orf93Q9H972 538 aaKnown RBP37.53■■■■□ 3.6
SMDT1-202ENST00000422252 KNDC1Q76NI1 1749 aa37.52■■■■□ 3.6
SMDT1-202ENST00000422252 MEX3CQ5U5Q3 659 aaKnown RBP37.51■■■■□ 3.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms