RNA–Protein interactions for RNA: ENST00000420539.1

PTP4A1P1-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 1, humanhuman

BASIC

Gene PTP4A1P1, Length 515 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P1-201ENST00000420539 HMGB1P09429 215 aaKnown RBP8.81□□□□□ -1
PTP4A1P1-201ENST00000420539 PACS2Q86VP3 889 aa8.81□□□□□ -1
PTP4A1P1-201ENST00000420539 DDRGK1Q96HY6 314 aa8.81□□□□□ -1
PTP4A1P1-201ENST00000420539 PLEKHG3A1L390 1219 aa8.8□□□□□ -1
PTP4A1P1-201ENST00000420539 CDK11BP21127 795 aaKnown RBP8.8□□□□□ -1
PTP4A1P1-201ENST00000420539 CDK11AQ9UQ88 783 aaPredicted RBP8.8□□□□□ -1
PTP4A1P1-201ENST00000420539 RCCD1A6NED2 376 aa8.79□□□□□ -1
PTP4A1P1-201ENST00000420539 ARHGAP33O14559 1287 aa8.79□□□□□ -1
PTP4A1P1-201ENST00000420539 SSTR3P32745 418 aaPredicted RBP8.79□□□□□ -1
PTP4A1P1-201ENST00000420539 DMRTA1Q5VZB9 504 aa8.79□□□□□ -1
PTP4A1P1-201ENST00000420539 POTEEQ6S8J3 1075 aa8.79□□□□□ -1
PTP4A1P1-201ENST00000420539 RGS22Q8NE09 1264 aa8.79□□□□□ -1
PTP4A1P1-201ENST00000420539 TATDN2Q93075 761 aa8.79□□□□□ -1
PTP4A1P1-201ENST00000420539 KIAA1468Q9P260 1216 aa8.79□□□□□ -1
PTP4A1P1-201ENST00000420539 HS3ST6Q96QI5 342 aa8.78□□□□□ -1
PTP4A1P1-201ENST00000420539 EYA1Q99502 592 aa8.78□□□□□ -1
PTP4A1P1-201ENST00000420539 ZBED2Q9BTP6 218 aa8.78□□□□□ -1
PTP4A1P1-201ENST00000420539 TMUB1Q9BVT8 246 aa8.78□□□□□ -1
PTP4A1P1-201ENST00000420539 POTEB3A0JP26 581 aa8.77□□□□□ -1.01
PTP4A1P1-201ENST00000420539 HSP90B1P14625 803 aaKnown RBP8.77□□□□□ -1.01
PTP4A1P1-201ENST00000420539 POTEBQ6S5H4 581 aa8.77□□□□□ -1.01
PTP4A1P1-201ENST00000420539 FAM217BQ9NTX9 383 aaPredicted RBP8.77□□□□□ -1.01
PTP4A1P1-201ENST00000420539 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.76□□□□□ -1.01
PTP4A1P1-201ENST00000420539 BEGAINQ9BUH8 593 aa8.76□□□□□ -1.01
PTP4A1P1-201ENST00000420539 SEPT9Q9UHD8 586 aaPredicted RBP8.76□□□□□ -1.01
PTP4A1P1-201ENST00000420539 DNAJB2P25686 324 aa8.75□□□□□ -1.01
PTP4A1P1-201ENST00000420539 ZNF687Q8N1G0 1237 aa8.75□□□□□ -1.01
PTP4A1P1-201ENST00000420539 CCDC82Q8N4S0 544 aa8.74□□□□□ -1.01
PTP4A1P1-201ENST00000420539 ATP1B4Q9UN42 357 aaPredicted RBP8.74□□□□□ -1.01
PTP4A1P1-201ENST00000420539 DDX11L8A8MPP1 907 aa8.73□□□□□ -1.01
PTP4A1P1-201ENST00000420539 PBX2P40425 430 aa8.73□□□□□ -1.01
PTP4A1P1-201ENST00000420539 CDAN1Q8IWY9 1227 aa8.73□□□□□ -1.01
PTP4A1P1-201ENST00000420539 TRAIPQ9BWF2 469 aa8.73□□□□□ -1.01
PTP4A1P1-201ENST00000420539 MTMR7Q9Y216 660 aa8.73□□□□□ -1.01
PTP4A1P1-201ENST00000420539 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.02
PTP4A1P1-201ENST00000420539 TMEM134Q9H6X4 195 aa8.71□□□□□ -1.02
PTP4A1P1-201ENST00000420539 RABGEF1Q9UJ41 708 aa8.71□□□□□ -1.02
PTP4A1P1-201ENST00000420539 VPS9D1Q9Y2B5 631 aa8.71□□□□□ -1.02
PTP4A1P1-201ENST00000420539 RDH13Q8NBN7 331 aa8.7□□□□□ -1.02
PTP4A1P1-201ENST00000420539 PUS7Q96PZ0 661 aaKnown RBP8.7□□□□□ -1.02
PTP4A1P1-201ENST00000420539 RBM25P49756 843 aaKnown RBP8.68□□□□□ -1.02
PTP4A1P1-201ENST00000420539 SWT1Q5T5J6 900 aaKnown RBP8.68□□□□□ -1.02
PTP4A1P1-201ENST00000420539 AEBP1Q8IUX7 1158 aa8.68□□□□□ -1.02
PTP4A1P1-201ENST00000420539 SULF1Q8IWU6 871 aa8.68□□□□□ -1.02
PTP4A1P1-201ENST00000420539 PCMTD1Q96MG8 357 aaPredicted RBP8.68□□□□□ -1.02
PTP4A1P1-201ENST00000420539 SLC4A5Q9BY07 1137 aa8.68□□□□□ -1.02
PTP4A1P1-201ENST00000420539 POLR3EQ9NVU0 708 aa8.68□□□□□ -1.02
PTP4A1P1-201ENST00000420539 RNF40O75150 1001 aa8.67□□□□□ -1.02
PTP4A1P1-201ENST00000420539 TMCO4Q5TGY1 634 aa8.67□□□□□ -1.02
PTP4A1P1-201ENST00000420539 ZNF428Q96B54 188 aa8.67□□□□□ -1.02
PTP4A1P1-201ENST00000420539 PCDH10Q9P2E7 1040 aa8.67□□□□□ -1.02
PTP4A1P1-201ENST00000420539 CD46P15529 392 aa8.66□□□□□ -1.02
PTP4A1P1-201ENST00000420539 LSM11P83369 360 aaKnown RBP eCLIP8.66□□□□□ -1.02
PTP4A1P1-201ENST00000420539 FAM98CQ17RN3 349 aaKnown RBP8.66□□□□□ -1.02
PTP4A1P1-201ENST00000420539 SH3D19Q5HYK7 790 aa8.66□□□□□ -1.02
PTP4A1P1-201ENST00000420539 FOXD4L5Q5VV16 416 aaPredicted RBP8.66□□□□□ -1.02
PTP4A1P1-201ENST00000420539 FOXD4L4Q8WXT5 416 aaPredicted RBP8.66□□□□□ -1.02
PTP4A1P1-201ENST00000420539 TBC1D2Q9BYX2 928 aa8.66□□□□□ -1.02
PTP4A1P1-201ENST00000420539 NBPF3Q9H094 633 aa8.66□□□□□ -1.02
PTP4A1P1-201ENST00000420539 HDGFP51858 240 aaKnown RBP8.65□□□□□ -1.02
PTP4A1P1-201ENST00000420539 MYSM1Q5VVJ2 828 aa8.65□□□□□ -1.02
PTP4A1P1-201ENST00000420539 ANKRD13DQ6ZTN6 518 aa8.65□□□□□ -1.02
PTP4A1P1-201ENST00000420539 MFAP1P55081 439 aaKnown RBP8.64□□□□□ -1.03
PTP4A1P1-201ENST00000420539 FLIIQ13045 1269 aa8.64□□□□□ -1.03
PTP4A1P1-201ENST00000420539 ADGRD1Q6QNK2 874 aa8.64□□□□□ -1.03
PTP4A1P1-201ENST00000420539 SAMD7Q7Z3H4 446 aa8.64□□□□□ -1.03
PTP4A1P1-201ENST00000420539 NUTM1Q86Y26 1132 aa8.64□□□□□ -1.03
PTP4A1P1-201ENST00000420539 SKIV2LQ15477 1246 aaKnown RBP8.63□□□□□ -1.03
PTP4A1P1-201ENST00000420539 MRPL50Q8N5N7 158 aaKnown RBP8.63□□□□□ -1.03
PTP4A1P1-201ENST00000420539 PROCA1Q8NCQ7 364 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1P1-201ENST00000420539 SPIRE2Q8WWL2 714 aa8.63□□□□□ -1.03
PTP4A1P1-201ENST00000420539 CHMP4AQ9BY43 222 aa8.63□□□□□ -1.03
PTP4A1P1-201ENST00000420539 GOPCQ9HD26 462 aa8.63□□□□□ -1.03
PTP4A1P1-201ENST00000420539 TK2O00142 265 aa8.62□□□□□ -1.03
PTP4A1P1-201ENST00000420539 STAC3Q96MF2 364 aa8.62□□□□□ -1.03
PTP4A1P1-201ENST00000420539 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
PTP4A1P1-201ENST00000420539 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
PTP4A1P1-201ENST00000420539 TRAK2O60296 914 aa8.61□□□□□ -1.03
PTP4A1P1-201ENST00000420539 SLC10A3P09131 477 aa8.61□□□□□ -1.03
PTP4A1P1-201ENST00000420539 SLC4A3P48751 1232 aa8.61□□□□□ -1.03
PTP4A1P1-201ENST00000420539 CLK2P49760 499 aaKnown RBP8.61□□□□□ -1.03
PTP4A1P1-201ENST00000420539 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
PTP4A1P1-201ENST00000420539 RSPH4AQ5TD94 716 aa8.61□□□□□ -1.03
PTP4A1P1-201ENST00000420539 ZFRQ96KR1 1074 aaKnown RBP8.61□□□□□ -1.03
PTP4A1P1-201ENST00000420539 BHMG1C9JSJ3 638 aaPredicted RBP8.6□□□□□ -1.03
PTP4A1P1-201ENST00000420539 DIXDC1Q155Q3 683 aa8.6□□□□□ -1.03
PTP4A1P1-201ENST00000420539 LAPTM4BQ86VI4 370 aa8.6□□□□□ -1.03
PTP4A1P1-201ENST00000420539 GZF1Q9H116 711 aaPredicted RBP8.6□□□□□ -1.03
PTP4A1P1-201ENST00000420539 MOXD2PA6NHM9 499 aa8.59□□□□□ -1.03
PTP4A1P1-201ENST00000420539 A6NJR5 290 aa8.59□□□□□ -1.03
PTP4A1P1-201ENST00000420539 GOLGA8CPA6NN73 597 aa8.59□□□□□ -1.03
PTP4A1P1-201ENST00000420539 RIC3Q7Z5B4 369 aa8.59□□□□□ -1.03
PTP4A1P1-201ENST00000420539 LIMD1Q9UGP4 676 aa8.59□□□□□ -1.03
PTP4A1P1-201ENST00000420539 KDM4AO75164 1064 aa8.58□□□□□ -1.04
PTP4A1P1-201ENST00000420539 NDUFV2P19404 249 aa8.58□□□□□ -1.04
PTP4A1P1-201ENST00000420539 SLF2Q8IX21 1173 aa8.58□□□□□ -1.04
PTP4A1P1-201ENST00000420539 E9PSI1 815 aa8.57□□□□□ -1.04
PTP4A1P1-201ENST00000420539 CFHP08603 1231 aa8.57□□□□□ -1.04
PTP4A1P1-201ENST00000420539 GCGRP47871 477 aa8.57□□□□□ -1.04
PTP4A1P1-201ENST00000420539 CLUAP1Q96AJ1 413 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms