RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 ADGRL2O95490 1459 aa18.28■□□□□ 0.52
CHCHD4-203ENST00000420103 BCANQ96GW7 911 aa18.28■□□□□ 0.52
CHCHD4-203ENST00000420103 SLAIN2Q9P270 581 aa18.28■□□□□ 0.52
CHCHD4-203ENST00000420103 NUTM2DQ5VT03 806 aaPredicted RBP18.27■□□□□ 0.52
CHCHD4-203ENST00000420103 NKTRP30414 1462 aaKnown RBP18.26■□□□□ 0.51
CHCHD4-203ENST00000420103 FAM50AQ14320 339 aaKnown RBP18.26■□□□□ 0.51
CHCHD4-203ENST00000420103 RIMS2Q9UQ26 1411 aa18.25■□□□□ 0.51
CHCHD4-203ENST00000420103 PLEKHG1Q9ULL1 1385 aa18.25■□□□□ 0.51
CHCHD4-203ENST00000420103 ANKRD50Q9ULJ7 1429 aa18.24■□□□□ 0.51
CHCHD4-203ENST00000420103 MYO5BQ9ULV0 1848 aa18.24■□□□□ 0.51
CHCHD4-203ENST00000420103 MSH6P52701 1360 aa18.24■□□□□ 0.51
CHCHD4-203ENST00000420103 TMEM131LA2VDJ0 1609 aa18.22■□□□□ 0.51
CHCHD4-203ENST00000420103 ADAMTS13Q76LX8 1427 aa18.21■□□□□ 0.51
CHCHD4-203ENST00000420103 CHD2O14647 1828 aaKnown RBP18.21■□□□□ 0.51
CHCHD4-203ENST00000420103 RPRD2Q5VT52 1461 aaKnown RBP18.2■□□□□ 0.5
CHCHD4-203ENST00000420103 GCC2Q8IWJ2 1684 aa18.2■□□□□ 0.5
CHCHD4-203ENST00000420103 TBX22Q9Y458 520 aa18.2■□□□□ 0.5
CHCHD4-203ENST00000420103 SETD1AO15047 1707 aaKnown RBP18.2■□□□□ 0.5
CHCHD4-203ENST00000420103 PHLPP1O60346 1717 aa18.2■□□□□ 0.5
CHCHD4-203ENST00000420103 LRP6O75581 1613 aa18.2■□□□□ 0.5
CHCHD4-203ENST00000420103 JCADQ9P266 1359 aa18.19■□□□□ 0.5
CHCHD4-203ENST00000420103 PPP1R15AO75807 674 aaPredicted RBP18.19■□□□□ 0.5
CHCHD4-203ENST00000420103 CHGAP10645 457 aaKnown RBP18.19■□□□□ 0.5
CHCHD4-203ENST00000420103 COL16A1Q07092 1604 aaPredicted RBP18.18■□□□□ 0.5
CHCHD4-203ENST00000420103 PTPRUQ92729 1446 aa18.16■□□□□ 0.5
CHCHD4-203ENST00000420103 E9PCH4 1651 aa18.14■□□□□ 0.49
CHCHD4-203ENST00000420103 UNC13BO14795 1591 aa18.13■□□□□ 0.49
CHCHD4-203ENST00000420103 C14orf37Q86TY3 774 aa18.13■□□□□ 0.49
CHCHD4-203ENST00000420103 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.12■□□□□ 0.49
CHCHD4-203ENST00000420103 HDGFP51858 240 aaKnown RBP18.11■□□□□ 0.49
CHCHD4-203ENST00000420103 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.11■□□□□ 0.49
CHCHD4-203ENST00000420103 C19orf44Q9H6X5 657 aa18.11■□□□□ 0.49
CHCHD4-203ENST00000420103 AMOTL2Q9Y2J4 779 aa18.11■□□□□ 0.49
CHCHD4-203ENST00000420103 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
CHCHD4-203ENST00000420103 BRINP3Q76B58 766 aa18.1■□□□□ 0.49
CHCHD4-203ENST00000420103 ATF3P18847 181 aa18.08■□□□□ 0.48
CHCHD4-203ENST00000420103 CADPS2Q86UW7 1296 aa18.08■□□□□ 0.48
CHCHD4-203ENST00000420103 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.48
CHCHD4-203ENST00000420103 TRIM52Q96A61 297 aa18.08■□□□□ 0.48
CHCHD4-203ENST00000420103 AHDC1Q5TGY3 1603 aaPredicted RBP18.08■□□□□ 0.48
CHCHD4-203ENST00000420103 SPATA31A6Q5VVP1 1343 aa18.07■□□□□ 0.48
CHCHD4-203ENST00000420103 UPF1Q92900 1129 aaKnown RBP eCLIP18.07■□□□□ 0.48
CHCHD4-203ENST00000420103 NUP155O75694 1391 aa18.06■□□□□ 0.48
CHCHD4-203ENST00000420103 PIK3R4Q99570 1358 aa18.06■□□□□ 0.48
CHCHD4-203ENST00000420103 DIP2AQ14689 1571 aa18.06■□□□□ 0.48
CHCHD4-203ENST00000420103 ITGAEP38570 1179 aa18.06■□□□□ 0.48
CHCHD4-203ENST00000420103 DDX17Q92841 729 aaKnown RBP18.06■□□□□ 0.48
CHCHD4-203ENST00000420103 ROCK1Q13464 1354 aa18.05■□□□□ 0.48
CHCHD4-203ENST00000420103 IQGAP3Q86VI3 1631 aa18.05■□□□□ 0.48
CHCHD4-203ENST00000420103 NUTM2BA6NNL0 878 aaPredicted RBP18.05■□□□□ 0.48
CHCHD4-203ENST00000420103 NUTM2EB1AL46 878 aaPredicted RBP18.05■□□□□ 0.48
CHCHD4-203ENST00000420103 MEX3CQ5U5Q3 659 aaKnown RBP18.05■□□□□ 0.48
CHCHD4-203ENST00000420103 NUTM2AQ8IVF1 878 aaPredicted RBP18.05■□□□□ 0.48
CHCHD4-203ENST00000420103 NRXN3Q9Y4C0 1643 aa18.05■□□□□ 0.48
CHCHD4-203ENST00000420103 METP08581 1390 aa18.04■□□□□ 0.48
CHCHD4-203ENST00000420103 SHPRHQ149N8 1683 aa18.03■□□□□ 0.48
CHCHD4-203ENST00000420103 ZNF772Q68DY9 489 aaPredicted RBP18.02■□□□□ 0.48
CHCHD4-203ENST00000420103 TRPM2O94759 1503 aa18.02■□□□□ 0.47
CHCHD4-203ENST00000420103 MST1RQ04912 1400 aa18.01■□□□□ 0.47
CHCHD4-203ENST00000420103 SRCAPQ6ZRS2 3230 aa18.01■□□□□ 0.47
CHCHD4-203ENST00000420103 ASXL1Q8IXJ9 1541 aa18■□□□□ 0.47
CHCHD4-203ENST00000420103 XRN1Q8IZH2 1706 aaKnown RBP18■□□□□ 0.47
CHCHD4-203ENST00000420103 RXRBP28702 533 aa17.98■□□□□ 0.47
CHCHD4-203ENST00000420103 SETBP1Q9Y6X0 1596 aa17.98■□□□□ 0.47
CHCHD4-203ENST00000420103 SETD5Q9C0A6 1442 aa17.98■□□□□ 0.47
CHCHD4-203ENST00000420103 AFF2P51816 1311 aa17.98■□□□□ 0.47
CHCHD4-203ENST00000420103 ZNF326Q5BKZ1 582 aaKnown RBP17.96■□□□□ 0.47
CHCHD4-203ENST00000420103 DCCP43146 1447 aa17.96■□□□□ 0.47
CHCHD4-203ENST00000420103 NHSL1Q5SYE7 1610 aa17.93■□□□□ 0.46
CHCHD4-203ENST00000420103 PNPLA6Q8IY17 1366 aa17.92■□□□□ 0.46
CHCHD4-203ENST00000420103 C8orf37Q96NL8 207 aa17.92■□□□□ 0.46
CHCHD4-203ENST00000420103 NEXMIFQ5QGS0 1516 aa17.92■□□□□ 0.46
CHCHD4-203ENST00000420103 CLTCL1P53675 1640 aa17.91■□□□□ 0.46
CHCHD4-203ENST00000420103 ADGRL3Q9HAR2 1447 aa17.91■□□□□ 0.46
CHCHD4-203ENST00000420103 LRRC59Q96AG4 307 aaKnown RBP17.91■□□□□ 0.46
CHCHD4-203ENST00000420103 SPHKAPQ2M3C7 1700 aa17.91■□□□□ 0.46
CHCHD4-203ENST00000420103 RGS12O14924 1447 aa17.9■□□□□ 0.46
CHCHD4-203ENST00000420103 QTRT2Q9H974 415 aaKnown RBP17.9■□□□□ 0.46
CHCHD4-203ENST00000420103 NALCNQ8IZF0 1738 aa17.89■□□□□ 0.46
CHCHD4-203ENST00000420103 CDK12Q9NYV4 1490 aaPredicted RBP17.89■□□□□ 0.45
CHCHD4-203ENST00000420103 ORAI2Q96SN7 254 aa17.89■□□□□ 0.45
CHCHD4-203ENST00000420103 RRBP1Q9P2E9 1410 aaKnown RBP17.89■□□□□ 0.45
CHCHD4-203ENST00000420103 ADAMTS2O95450 1211 aa17.88■□□□□ 0.45
CHCHD4-203ENST00000420103 ROBO2Q9HCK4 1378 aa17.88■□□□□ 0.45
CHCHD4-203ENST00000420103 C1orf167Q5SNV9 1468 aa17.88■□□□□ 0.45
CHCHD4-203ENST00000420103 RBM6P78332 1123 aaKnown RBP17.84■□□□□ 0.45
CHCHD4-203ENST00000420103 SOS2Q07890 1332 aaPredicted RBP17.83■□□□□ 0.44
CHCHD4-203ENST00000420103 NGLY1Q96IV0 654 aa17.83■□□□□ 0.44
CHCHD4-203ENST00000420103 NAIPQ13075 1403 aa17.82■□□□□ 0.44
CHCHD4-203ENST00000420103 EP400Q96L91 3159 aa17.8■□□□□ 0.44
CHCHD4-203ENST00000420103 PTCH1Q13635 1447 aa17.8■□□□□ 0.44
CHCHD4-203ENST00000420103 LAMC1P11047 1609 aa17.8■□□□□ 0.44
CHCHD4-203ENST00000420103 USP21Q9UK80 565 aa17.78■□□□□ 0.44
CHCHD4-203ENST00000420103 FOXD1Q16676 465 aa17.77■□□□□ 0.44
CHCHD4-203ENST00000420103 FNBP4Q8N3X1 1017 aaPredicted RBP17.77■□□□□ 0.44
CHCHD4-203ENST00000420103 VGFO15240 615 aaPredicted RBP17.76■□□□□ 0.43
CHCHD4-203ENST00000420103 XPCQ01831 940 aaPredicted RBP17.76■□□□□ 0.43
CHCHD4-203ENST00000420103 PRAG1Q86YV5 1406 aa17.75■□□□□ 0.43
CHCHD4-203ENST00000420103 KIF1BO60333 1816 aa17.75■□□□□ 0.43
CHCHD4-203ENST00000420103 ATRNO75882 1429 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms