RNA–Protein interactions for RNA: ENST00000418000.5

VGLL4-206, Transcript of vestigial like family member 4, humanhuman

TSL 3

Gene VGLL4, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-206ENST00000418000 ROBO1Q9Y6N7 1651 aa38.92■■■■□ 3.82
VGLL4-206ENST00000418000 NKTRP30414 1462 aaKnown RBP38.91■■■■□ 3.82
VGLL4-206ENST00000418000 UNC13BO14795 1591 aa38.9■■■■□ 3.82
VGLL4-206ENST00000418000 CHD2O14647 1828 aaKnown RBP38.89■■■■□ 3.82
VGLL4-206ENST00000418000 TMEM131LA2VDJ0 1609 aa38.89■■■■□ 3.82
VGLL4-206ENST00000418000 ZFYVE9O95405 1425 aa38.89■■■■□ 3.82
VGLL4-206ENST00000418000 PROSER2Q86WR7 435 aaPredicted RBP38.88■■■■□ 3.81
VGLL4-206ENST00000418000 RBM33Q96EV2 1170 aaKnown RBP38.87■■■■□ 3.81
VGLL4-206ENST00000418000 RGS17Q9UGC6 210 aaPredicted RBP38.83■■■■□ 3.81
VGLL4-206ENST00000418000 E9PCH4 1651 aa38.83■■■■□ 3.81
VGLL4-206ENST00000418000 PLEKHG1Q9ULL1 1385 aa38.8■■■■□ 3.8
VGLL4-206ENST00000418000 RIMS2Q9UQ26 1411 aa38.8■■■■□ 3.8
VGLL4-206ENST00000418000 BCANQ96GW7 911 aa38.79■■■■□ 3.8
VGLL4-206ENST00000418000 IQGAP3Q86VI3 1631 aa38.74■■■■□ 3.79
VGLL4-206ENST00000418000 MSH6P52701 1360 aa38.72■■■■□ 3.79
VGLL4-206ENST00000418000 PHLPP1O60346 1717 aa38.7■■■■□ 3.79
VGLL4-206ENST00000418000 PPP1R15AO75807 674 aaPredicted RBP38.69■■■■□ 3.78
VGLL4-206ENST00000418000 ROCK1Q13464 1354 aa38.68■■■■□ 3.78
VGLL4-206ENST00000418000 HDGFP51858 240 aaKnown RBP38.66■■■■□ 3.78
VGLL4-206ENST00000418000 SLAIN2Q9P270 581 aa38.63■■■■□ 3.77
VGLL4-206ENST00000418000 TBX22Q9Y458 520 aa38.63■■■■□ 3.77
VGLL4-206ENST00000418000 ADAMTS13Q76LX8 1427 aa38.63■■■■□ 3.77
VGLL4-206ENST00000418000 CHGAP10645 457 aaKnown RBP38.62■■■■□ 3.77
VGLL4-206ENST00000418000 DIP2AQ14689 1571 aa38.61■■■■□ 3.77
VGLL4-206ENST00000418000 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.6■■■■□ 3.77
VGLL4-206ENST00000418000 COL16A1Q07092 1604 aaPredicted RBP38.57■■■■□ 3.77
VGLL4-206ENST00000418000 NUTM2DQ5VT03 806 aaPredicted RBP38.57■■■■□ 3.76
VGLL4-206ENST00000418000 POTEAQ6S8J7 498 aa38.57■■■■□ 3.76
VGLL4-206ENST00000418000 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.57■■■■□ 3.76
VGLL4-206ENST00000418000 NCOA3Q9Y6Q9 1424 aa38.56■■■■□ 3.76
VGLL4-206ENST00000418000 NUP155O75694 1391 aa38.52■■■■□ 3.76
VGLL4-206ENST00000418000 PIK3R4Q99570 1358 aa38.5■■■■□ 3.75
VGLL4-206ENST00000418000 JCADQ9P266 1359 aa38.5■■■■□ 3.75
VGLL4-206ENST00000418000 SPHKAPQ2M3C7 1700 aa38.49■■■■□ 3.75
VGLL4-206ENST00000418000 TRPM2O94759 1503 aa38.49■■■■□ 3.75
VGLL4-206ENST00000418000 NRXN3Q9Y4C0 1643 aa38.46■■■■□ 3.75
VGLL4-206ENST00000418000 ITGAEP38570 1179 aa38.45■■■■□ 3.75
VGLL4-206ENST00000418000 PTPRUQ92729 1446 aa38.44■■■■□ 3.74
VGLL4-206ENST00000418000 C14orf37Q86TY3 774 aa38.43■■■■□ 3.74
VGLL4-206ENST00000418000 AHDC1Q5TGY3 1603 aaPredicted RBP38.42■■■■□ 3.74
VGLL4-206ENST00000418000 SETD1AO15047 1707 aaKnown RBP38.41■■■■□ 3.74
VGLL4-206ENST00000418000 C19orf44Q9H6X5 657 aa38.4■■■■□ 3.74
VGLL4-206ENST00000418000 XRN1Q8IZH2 1706 aaKnown RBP38.4■■■■□ 3.74
VGLL4-206ENST00000418000 CADPS2Q86UW7 1296 aa38.38■■■■□ 3.73
VGLL4-206ENST00000418000 SHPRHQ149N8 1683 aa38.38■■■■□ 3.73
VGLL4-206ENST00000418000 SETBP1Q9Y6X0 1596 aa38.37■■■■□ 3.73
VGLL4-206ENST00000418000 AMOTL2Q9Y2J4 779 aa38.37■■■■□ 3.73
VGLL4-206ENST00000418000 LRP6O75581 1613 aa38.37■■■■□ 3.73
VGLL4-206ENST00000418000 ATF3P18847 181 aa38.34■■■■□ 3.73
VGLL4-206ENST00000418000 PPARGC1BQ86YN6 1023 aaKnown RBP38.34■■■■□ 3.73
VGLL4-206ENST00000418000 SPATA31A6Q5VVP1 1343 aa38.29■■■■□ 3.72
VGLL4-206ENST00000418000 CLTCL1P53675 1640 aa38.28■■■■□ 3.72
VGLL4-206ENST00000418000 DCCP43146 1447 aa38.27■■■■□ 3.72
VGLL4-206ENST00000418000 BRINP3Q76B58 766 aa38.24■■■■□ 3.71
VGLL4-206ENST00000418000 KIF1BO60333 1816 aa38.24■■■■□ 3.71
VGLL4-206ENST00000418000 NEXMIFQ5QGS0 1516 aa38.23■■■■□ 3.71
VGLL4-206ENST00000418000 NHSL1Q5SYE7 1610 aa38.22■■■■□ 3.71
VGLL4-206ENST00000418000 METP08581 1390 aa38.21■■■■□ 3.71
VGLL4-206ENST00000418000 ZNF326Q5BKZ1 582 aaKnown RBP38.21■■■■□ 3.71
VGLL4-206ENST00000418000 ASXL1Q8IXJ9 1541 aa38.21■■■■□ 3.71
VGLL4-206ENST00000418000 MST1RQ04912 1400 aa38.19■■■■□ 3.7
VGLL4-206ENST00000418000 NALCNQ8IZF0 1738 aa38.18■■■■□ 3.7
VGLL4-206ENST00000418000 MEX3CQ5U5Q3 659 aaKnown RBP38.16■■■■□ 3.7
VGLL4-206ENST00000418000 RRBP1Q9P2E9 1410 aaKnown RBP38.13■■■■□ 3.7
VGLL4-206ENST00000418000 NAIPQ13075 1403 aa38.12■■■■□ 3.69
VGLL4-206ENST00000418000 ZNF772Q68DY9 489 aaPredicted RBP38.11■■■■□ 3.69
VGLL4-206ENST00000418000 ADGRL3Q9HAR2 1447 aa38.11■■■■□ 3.69
VGLL4-206ENST00000418000 SETD5Q9C0A6 1442 aa38.1■■■■□ 3.69
VGLL4-206ENST00000418000 NUTM2BA6NNL0 878 aaPredicted RBP38.03■■■■□ 3.68
VGLL4-206ENST00000418000 NUTM2EB1AL46 878 aaPredicted RBP38.03■■■■□ 3.68
VGLL4-206ENST00000418000 NUTM2AQ8IVF1 878 aaPredicted RBP38.03■■■■□ 3.68
VGLL4-206ENST00000418000 TRIM52Q96A61 297 aa37.99■■■■□ 3.67
VGLL4-206ENST00000418000 DDX17Q92841 729 aaKnown RBP37.97■■■■□ 3.67
VGLL4-206ENST00000418000 PPLO60437 1756 aa37.97■■■■□ 3.67
VGLL4-206ENST00000418000 PTCH1Q13635 1447 aa37.95■■■■□ 3.67
VGLL4-206ENST00000418000 LAMC1P11047 1609 aa37.95■■■■□ 3.67
VGLL4-206ENST00000418000 LRRC59Q96AG4 307 aaKnown RBP37.95■■■■□ 3.67
VGLL4-206ENST00000418000 C1orf167Q5SNV9 1468 aa37.93■■■■□ 3.66
VGLL4-206ENST00000418000 PNPLA6Q8IY17 1366 aa37.93■■■■□ 3.66
VGLL4-206ENST00000418000 AFF2P51816 1311 aa37.92■■■■□ 3.66
VGLL4-206ENST00000418000 RXRBP28702 533 aa37.92■■■■□ 3.66
VGLL4-206ENST00000418000 UPF1Q92900 1129 aaKnown RBP eCLIP37.92■■■■□ 3.66
VGLL4-206ENST00000418000 HFM1A2PYH4 1435 aa37.92■■■■□ 3.66
VGLL4-206ENST00000418000 CDK12Q9NYV4 1490 aaPredicted RBP37.91■■■■□ 3.66
VGLL4-206ENST00000418000 ROBO2Q9HCK4 1378 aa37.9■■■■□ 3.66
VGLL4-206ENST00000418000 PRAG1Q86YV5 1406 aa37.89■■■■□ 3.66
VGLL4-206ENST00000418000 VGFO15240 615 aaPredicted RBP37.89■■■■□ 3.66
VGLL4-206ENST00000418000 RPGRIP1LQ68CZ1 1315 aa37.84■■■■□ 3.65
VGLL4-206ENST00000418000 SLC4A1APQ9BWU0 796 aaKnown RBP37.81■■■■□ 3.64
VGLL4-206ENST00000418000 C8orf37Q96NL8 207 aa37.8■■■■□ 3.64
VGLL4-206ENST00000418000 ORAI2Q96SN7 254 aa37.79■■■■□ 3.64
VGLL4-206ENST00000418000 SOS2Q07890 1332 aaPredicted RBP37.77■■■■□ 3.64
VGLL4-206ENST00000418000 RGS12O14924 1447 aa37.75■■■■□ 3.63
VGLL4-206ENST00000418000 IFT172Q9UG01 1749 aa37.73■■■■□ 3.63
VGLL4-206ENST00000418000 QTRT2Q9H974 415 aaKnown RBP37.73■■■■□ 3.63
VGLL4-206ENST00000418000 COL22A1Q8NFW1 1626 aaPredicted RBP37.72■■■■□ 3.63
VGLL4-206ENST00000418000 CDC42BPGQ6DT37 1551 aa37.71■■■■□ 3.63
VGLL4-206ENST00000418000 RBM6P78332 1123 aaKnown RBP37.7■■■■□ 3.63
VGLL4-206ENST00000418000 ADAMTS2O95450 1211 aa37.69■■■■□ 3.62
VGLL4-206ENST00000418000 FOXD1Q16676 465 aa37.69■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms