RNA–Protein interactions for RNA: ENST00000416208.5

SCAP-203, Transcript of SREBF chaperone, humanhuman

TSL 5

Gene SCAP, Length 1,222 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-203ENST00000416208 SCAF1Q9H7N4 1312 aaKnown RBP28.93■■■□□ 2.22
SCAP-203ENST00000416208 SENP3Q9H4L4 574 aaPredicted RBP28.91■■■□□ 2.22
SCAP-203ENST00000416208 RIMS2Q9UQ26 1411 aa28.89■■■□□ 2.22
SCAP-203ENST00000416208 NAIPQ13075 1403 aa28.88■■■□□ 2.21
SCAP-203ENST00000416208 ILDR2Q71H61 639 aa28.88■■■□□ 2.21
SCAP-203ENST00000416208 KCNA6P17658 529 aa28.86■■■□□ 2.21
SCAP-203ENST00000416208 CHGAP10645 457 aaKnown RBP28.84■■■□□ 2.21
SCAP-203ENST00000416208 PLEKHG1Q9ULL1 1385 aa28.84■■■□□ 2.21
SCAP-203ENST00000416208 NUTM2DQ5VT03 806 aaPredicted RBP28.83■■■□□ 2.21
SCAP-203ENST00000416208 RBM33Q96EV2 1170 aaKnown RBP28.83■■■□□ 2.21
SCAP-203ENST00000416208 TMEM94Q12767 1356 aa28.81■■■□□ 2.2
SCAP-203ENST00000416208 NWD1Q149M9 1564 aa28.8■■■□□ 2.2
SCAP-203ENST00000416208 BCANQ96GW7 911 aa28.78■■■□□ 2.2
SCAP-203ENST00000416208 ADAMTS13Q76LX8 1427 aa28.77■■■□□ 2.2
SCAP-203ENST00000416208 PPP1R15AO75807 674 aaPredicted RBP28.76■■■□□ 2.19
SCAP-203ENST00000416208 SPHKAPQ2M3C7 1700 aa28.76■■■□□ 2.19
SCAP-203ENST00000416208 PROSER2Q86WR7 435 aaPredicted RBP28.75■■■□□ 2.19
SCAP-203ENST00000416208 CHD2O14647 1828 aaKnown RBP28.74■■■□□ 2.19
SCAP-203ENST00000416208 HFM1A2PYH4 1435 aa28.74■■■□□ 2.19
SCAP-203ENST00000416208 HDGFP51858 240 aaKnown RBP28.72■■■□□ 2.19
SCAP-203ENST00000416208 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.72■■■□□ 2.19
SCAP-203ENST00000416208 TBX22Q9Y458 520 aa28.72■■■□□ 2.19
SCAP-203ENST00000416208 NKTRP30414 1462 aaKnown RBP28.72■■■□□ 2.19
SCAP-203ENST00000416208 CLTCL1P53675 1640 aa28.69■■■□□ 2.18
SCAP-203ENST00000416208 MED1Q15648 1581 aaPredicted RBP28.67■■■□□ 2.18
SCAP-203ENST00000416208 NRXN3Q9Y4C0 1643 aa28.65■■■□□ 2.18
SCAP-203ENST00000416208 TRPM2O94759 1503 aa28.64■■■□□ 2.18
SCAP-203ENST00000416208 FAM135BQ49AJ0 1406 aa28.63■■■□□ 2.17
SCAP-203ENST00000416208 PTPRUQ92729 1446 aa28.63■■■□□ 2.17
SCAP-203ENST00000416208 TRIM52Q96A61 297 aa28.62■■■□□ 2.17
SCAP-203ENST00000416208 DIP2AQ14689 1571 aa28.61■■■□□ 2.17
SCAP-203ENST00000416208 NEXMIFQ5QGS0 1516 aa28.58■■■□□ 2.17
SCAP-203ENST00000416208 ZNF326Q5BKZ1 582 aaKnown RBP28.57■■■□□ 2.16
SCAP-203ENST00000416208 PIK3R4Q99570 1358 aa28.57■■■□□ 2.16
SCAP-203ENST00000416208 SETBP1Q9Y6X0 1596 aa28.57■■■□□ 2.16
SCAP-203ENST00000416208 ROBO1Q9Y6N7 1651 aa28.57■■■□□ 2.16
SCAP-203ENST00000416208 MSH6P52701 1360 aa28.56■■■□□ 2.16
SCAP-203ENST00000416208 SLC4A1APQ9BWU0 796 aaKnown RBP28.55■■■□□ 2.16
SCAP-203ENST00000416208 FOXD1Q16676 465 aa28.54■■■□□ 2.16
SCAP-203ENST00000416208 AMOTL2Q9Y2J4 779 aa28.54■■■□□ 2.16
SCAP-203ENST00000416208 METP08581 1390 aa28.52■■■□□ 2.16
SCAP-203ENST00000416208 SOCS7O14512 581 aa28.52■■■□□ 2.16
SCAP-203ENST00000416208 SLAIN2Q9P270 581 aa28.52■■■□□ 2.16
SCAP-203ENST00000416208 KIF1BO60333 1816 aa28.52■■■□□ 2.16
SCAP-203ENST00000416208 NCOA3Q9Y6Q9 1424 aa28.51■■■□□ 2.15
SCAP-203ENST00000416208 XRN1Q8IZH2 1706 aaKnown RBP28.49■■■□□ 2.15
SCAP-203ENST00000416208 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.47■■■□□ 2.15
SCAP-203ENST00000416208 C19orf44Q9H6X5 657 aa28.44■■■□□ 2.14
SCAP-203ENST00000416208 C14orf37Q86TY3 774 aa28.42■■■□□ 2.14
SCAP-203ENST00000416208 MPHOSPH9Q99550 1183 aa28.41■■■□□ 2.14
SCAP-203ENST00000416208 RGS17Q9UGC6 210 aaPredicted RBP28.41■■■□□ 2.14
SCAP-203ENST00000416208 SETD1AO15047 1707 aaKnown RBP28.4■■■□□ 2.14
SCAP-203ENST00000416208 CADPS2Q86UW7 1296 aa28.37■■■□□ 2.13
SCAP-203ENST00000416208 PPLO60437 1756 aa28.37■■■□□ 2.13
SCAP-203ENST00000416208 PHLPP1O60346 1717 aa28.36■■■□□ 2.13
SCAP-203ENST00000416208 RPGRIP1LQ68CZ1 1315 aa28.36■■■□□ 2.13
SCAP-203ENST00000416208 PHF23Q9BUL5 403 aaPredicted RBP28.35■■■□□ 2.13
SCAP-203ENST00000416208 COL16A1Q07092 1604 aaPredicted RBP28.34■■■□□ 2.13
SCAP-203ENST00000416208 VGFO15240 615 aaPredicted RBP28.34■■■□□ 2.13
SCAP-203ENST00000416208 ATF3P18847 181 aa28.34■■■□□ 2.13
SCAP-203ENST00000416208 SPATA31E1Q6ZUB1 1445 aa28.34■■■□□ 2.13
SCAP-203ENST00000416208 SETD5Q9C0A6 1442 aa28.33■■■□□ 2.13
SCAP-203ENST00000416208 DCCP43146 1447 aa28.3■■■□□ 2.12
SCAP-203ENST00000416208 BRINP3Q76B58 766 aa28.3■■■□□ 2.12
SCAP-203ENST00000416208 CCDC144AA2RUR9 1427 aa28.29■■■□□ 2.12
SCAP-203ENST00000416208 MST1RQ04912 1400 aa28.29■■■□□ 2.12
SCAP-203ENST00000416208 ROBO2Q9HCK4 1378 aa28.29■■■□□ 2.12
SCAP-203ENST00000416208 ADGRF5Q8IZF2 1346 aa28.29■■■□□ 2.12
SCAP-203ENST00000416208 NALCNQ8IZF0 1738 aa28.28■■■□□ 2.12
SCAP-203ENST00000416208 AHDC1Q5TGY3 1603 aaPredicted RBP28.28■■■□□ 2.12
SCAP-203ENST00000416208 ADGRL3Q9HAR2 1447 aa28.27■■■□□ 2.12
SCAP-203ENST00000416208 RGL3Q3MIN7 710 aa28.27■■■□□ 2.12
SCAP-203ENST00000416208 RAB3GAP2Q9H2M9 1393 aa28.25■■■□□ 2.11
SCAP-203ENST00000416208 JCADQ9P266 1359 aa28.25■■■□□ 2.11
SCAP-203ENST00000416208 PTCH1Q13635 1447 aa28.25■■■□□ 2.11
SCAP-203ENST00000416208 IFT172Q9UG01 1749 aa28.23■■■□□ 2.11
SCAP-203ENST00000416208 PRAG1Q86YV5 1406 aa28.23■■■□□ 2.11
SCAP-203ENST00000416208 ASXL1Q8IXJ9 1541 aa28.22■■■□□ 2.11
SCAP-203ENST00000416208 POTEAQ6S8J7 498 aa28.2■■■□□ 2.1
SCAP-203ENST00000416208 LRP6O75581 1613 aa28.19■■■□□ 2.1
SCAP-203ENST00000416208 DDX17Q92841 729 aaKnown RBP28.18■■■□□ 2.1
SCAP-203ENST00000416208 NHSL1Q5SYE7 1610 aa28.15■■■□□ 2.1
SCAP-203ENST00000416208 ANKRD30BQ9BXX2 1392 aa28.15■■■□□ 2.1
SCAP-203ENST00000416208 C1orf167Q5SNV9 1468 aa28.15■■■□□ 2.1
SCAP-203ENST00000416208 PIK3C2GO75747 1445 aa28.14■■■□□ 2.1
SCAP-203ENST00000416208 SHPRHQ149N8 1683 aa28.13■■■□□ 2.09
SCAP-203ENST00000416208 TMEM132EQ6IEE7 984 aa28.12■■■□□ 2.09
SCAP-203ENST00000416208 ACIN1Q9UKV3 1341 aaKnown RBP28.11■■■□□ 2.09
SCAP-203ENST00000416208 ORAI2Q96SN7 254 aa28.09■■■□□ 2.09
SCAP-203ENST00000416208 STK26Q9P289 416 aa28.09■■■□□ 2.09
SCAP-203ENST00000416208 SPATA31A6Q5VVP1 1343 aa28.09■■■□□ 2.09
SCAP-203ENST00000416208 TECPR2O15040 1411 aa28.09■■■□□ 2.09
SCAP-203ENST00000416208 WAPLQ7Z5K2 1190 aa28.08■■■□□ 2.09
SCAP-203ENST00000416208 LRPPRCP42704 1394 aaKnown RBP28.08■■■□□ 2.09
SCAP-203ENST00000416208 PLEKHH1Q9ULM0 1364 aa28.07■■■□□ 2.08
SCAP-203ENST00000416208 NRXN1Q9ULB1 1477 aa28.07■■■□□ 2.08
SCAP-203ENST00000416208 ABCC11Q96J66 1382 aa28.05■■■□□ 2.08
SCAP-203ENST00000416208 C14orf93Q9H972 538 aaKnown RBP28.03■■■□□ 2.08
SCAP-203ENST00000416208 LAMC1P11047 1609 aa28.03■■■□□ 2.08
SCAP-203ENST00000416208 YTHDC2Q9H6S0 1430 aaKnown RBP28.01■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms