RNA–Protein interactions for RNA: ENST00000415281.1

NCKIPSD-203, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-203ENST00000415281 KCNA6P17658 529 aa19.2■□□□□ 0.66
NCKIPSD-203ENST00000415281 IQGAP3Q86VI3 1631 aa19.2■□□□□ 0.66
NCKIPSD-203ENST00000415281 RBM33Q96EV2 1170 aaKnown RBP19.18■□□□□ 0.66
NCKIPSD-203ENST00000415281 NWD1Q149M9 1564 aa19.18■□□□□ 0.66
NCKIPSD-203ENST00000415281 CHD2O14647 1828 aaKnown RBP19.17■□□□□ 0.66
NCKIPSD-203ENST00000415281 TMEM94Q12767 1356 aa19.17■□□□□ 0.66
NCKIPSD-203ENST00000415281 SENP3Q9H4L4 574 aaPredicted RBP19.15■□□□□ 0.66
NCKIPSD-203ENST00000415281 RIMS2Q9UQ26 1411 aa19.15■□□□□ 0.66
NCKIPSD-203ENST00000415281 ITGAEP38570 1179 aa19.14■□□□□ 0.65
NCKIPSD-203ENST00000415281 PLEKHG1Q9ULL1 1385 aa19.14■□□□□ 0.65
NCKIPSD-203ENST00000415281 FAM135BQ49AJ0 1406 aa19.11■□□□□ 0.65
NCKIPSD-203ENST00000415281 ADAMTS13Q76LX8 1427 aa19.11■□□□□ 0.65
NCKIPSD-203ENST00000415281 NUP155O75694 1391 aa19.11■□□□□ 0.65
NCKIPSD-203ENST00000415281 PROSER2Q86WR7 435 aaPredicted RBP19.1■□□□□ 0.65
NCKIPSD-203ENST00000415281 NUTM2DQ5VT03 806 aaPredicted RBP19.09■□□□□ 0.65
NCKIPSD-203ENST00000415281 NKTRP30414 1462 aaKnown RBP19.09■□□□□ 0.65
NCKIPSD-203ENST00000415281 TBX22Q9Y458 520 aa19.08■□□□□ 0.64
NCKIPSD-203ENST00000415281 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.64
NCKIPSD-203ENST00000415281 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.64
NCKIPSD-203ENST00000415281 RGS17Q9UGC6 210 aaPredicted RBP19.07■□□□□ 0.64
NCKIPSD-203ENST00000415281 CHGAP10645 457 aaKnown RBP19.05■□□□□ 0.64
NCKIPSD-203ENST00000415281 SPHKAPQ2M3C7 1700 aa19.05■□□□□ 0.64
NCKIPSD-203ENST00000415281 NRXN3Q9Y4C0 1643 aa19.04■□□□□ 0.64
NCKIPSD-203ENST00000415281 PTPRUQ92729 1446 aa19.04■□□□□ 0.64
NCKIPSD-203ENST00000415281 NAIPQ13075 1403 aa19.03■□□□□ 0.64
NCKIPSD-203ENST00000415281 BCANQ96GW7 911 aa19.03■□□□□ 0.64
NCKIPSD-203ENST00000415281 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.02■□□□□ 0.64
NCKIPSD-203ENST00000415281 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
NCKIPSD-203ENST00000415281 PPP1R15AO75807 674 aaPredicted RBP19■□□□□ 0.63
NCKIPSD-203ENST00000415281 SLAIN2Q9P270 581 aa18.99■□□□□ 0.63
NCKIPSD-203ENST00000415281 CLTCL1P53675 1640 aa18.99■□□□□ 0.63
NCKIPSD-203ENST00000415281 DIP2AQ14689 1571 aa18.98■□□□□ 0.63
NCKIPSD-203ENST00000415281 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.98■□□□□ 0.63
NCKIPSD-203ENST00000415281 NCOA3Q9Y6Q9 1424 aa18.97■□□□□ 0.63
NCKIPSD-203ENST00000415281 MSH6P52701 1360 aa18.96■□□□□ 0.63
NCKIPSD-203ENST00000415281 PIK3R4Q99570 1358 aa18.96■□□□□ 0.63
NCKIPSD-203ENST00000415281 SETBP1Q9Y6X0 1596 aa18.95■□□□□ 0.62
NCKIPSD-203ENST00000415281 AMOTL2Q9Y2J4 779 aa18.95■□□□□ 0.62
NCKIPSD-203ENST00000415281 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
NCKIPSD-203ENST00000415281 NEXMIFQ5QGS0 1516 aa18.94■□□□□ 0.62
NCKIPSD-203ENST00000415281 PHLPP1O60346 1717 aa18.94■□□□□ 0.62
NCKIPSD-203ENST00000415281 TRPM2O94759 1503 aa18.93■□□□□ 0.62
NCKIPSD-203ENST00000415281 METP08581 1390 aa18.93■□□□□ 0.62
NCKIPSD-203ENST00000415281 COL16A1Q07092 1604 aaPredicted RBP18.92■□□□□ 0.62
NCKIPSD-203ENST00000415281 PHF23Q9BUL5 403 aaPredicted RBP18.92■□□□□ 0.62
NCKIPSD-203ENST00000415281 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
NCKIPSD-203ENST00000415281 C19orf44Q9H6X5 657 aa18.9■□□□□ 0.62
NCKIPSD-203ENST00000415281 HFM1A2PYH4 1435 aa18.9■□□□□ 0.62
NCKIPSD-203ENST00000415281 KIF1BO60333 1816 aa18.89■□□□□ 0.61
NCKIPSD-203ENST00000415281 SETD1AO15047 1707 aaKnown RBP18.88■□□□□ 0.61
NCKIPSD-203ENST00000415281 AHDC1Q5TGY3 1603 aaPredicted RBP18.85■□□□□ 0.61
NCKIPSD-203ENST00000415281 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
NCKIPSD-203ENST00000415281 LRP6O75581 1613 aa18.84■□□□□ 0.61
NCKIPSD-203ENST00000415281 JCADQ9P266 1359 aa18.83■□□□□ 0.61
NCKIPSD-203ENST00000415281 BRINP3Q76B58 766 aa18.83■□□□□ 0.6
NCKIPSD-203ENST00000415281 CADPS2Q86UW7 1296 aa18.83■□□□□ 0.6
NCKIPSD-203ENST00000415281 NALCNQ8IZF0 1738 aa18.82■□□□□ 0.6
NCKIPSD-203ENST00000415281 MST1RQ04912 1400 aa18.82■□□□□ 0.6
NCKIPSD-203ENST00000415281 ATF3P18847 181 aa18.81■□□□□ 0.6
NCKIPSD-203ENST00000415281 FOXD1Q16676 465 aa18.81■□□□□ 0.6
NCKIPSD-203ENST00000415281 C14orf37Q86TY3 774 aa18.81■□□□□ 0.6
NCKIPSD-203ENST00000415281 TRIM52Q96A61 297 aa18.81■□□□□ 0.6
NCKIPSD-203ENST00000415281 PPLO60437 1756 aa18.81■□□□□ 0.6
NCKIPSD-203ENST00000415281 DCCP43146 1447 aa18.8■□□□□ 0.6
NCKIPSD-203ENST00000415281 SHPRHQ149N8 1683 aa18.79■□□□□ 0.6
NCKIPSD-203ENST00000415281 SLC4A1APQ9BWU0 796 aaKnown RBP18.79■□□□□ 0.6
NCKIPSD-203ENST00000415281 NHSL1Q5SYE7 1610 aa18.78■□□□□ 0.6
NCKIPSD-203ENST00000415281 ASXL1Q8IXJ9 1541 aa18.77■□□□□ 0.6
NCKIPSD-203ENST00000415281 ADGRL3Q9HAR2 1447 aa18.76■□□□□ 0.59
NCKIPSD-203ENST00000415281 ROBO2Q9HCK4 1378 aa18.76■□□□□ 0.59
NCKIPSD-203ENST00000415281 DDX17Q92841 729 aaKnown RBP18.75■□□□□ 0.59
NCKIPSD-203ENST00000415281 VGFO15240 615 aaPredicted RBP18.74■□□□□ 0.59
NCKIPSD-203ENST00000415281 PRAG1Q86YV5 1406 aa18.74■□□□□ 0.59
NCKIPSD-203ENST00000415281 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
NCKIPSD-203ENST00000415281 SPATA31E1Q6ZUB1 1445 aa18.73■□□□□ 0.59
NCKIPSD-203ENST00000415281 SETD5Q9C0A6 1442 aa18.73■□□□□ 0.59
NCKIPSD-203ENST00000415281 SPATA31A6Q5VVP1 1343 aa18.73■□□□□ 0.59
NCKIPSD-203ENST00000415281 IFT172Q9UG01 1749 aa18.72■□□□□ 0.59
NCKIPSD-203ENST00000415281 MPHOSPH9Q99550 1183 aa18.71■□□□□ 0.59
NCKIPSD-203ENST00000415281 PTCH1Q13635 1447 aa18.71■□□□□ 0.59
NCKIPSD-203ENST00000415281 ADGRF5Q8IZF2 1346 aa18.71■□□□□ 0.59
NCKIPSD-203ENST00000415281 LAMC1P11047 1609 aa18.71■□□□□ 0.58
NCKIPSD-203ENST00000415281 C1orf167Q5SNV9 1468 aa18.69■□□□□ 0.58
NCKIPSD-203ENST00000415281 ORAI2Q96SN7 254 aa18.67■□□□□ 0.58
NCKIPSD-203ENST00000415281 RGL3Q3MIN7 710 aa18.64■□□□□ 0.57
NCKIPSD-203ENST00000415281 PNPLA6Q8IY17 1366 aa18.64■□□□□ 0.57
NCKIPSD-203ENST00000415281 NUTM2BA6NNL0 878 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-203ENST00000415281 NUTM2EB1AL46 878 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-203ENST00000415281 NUTM2AQ8IVF1 878 aaPredicted RBP18.63■□□□□ 0.57
NCKIPSD-203ENST00000415281 LRRC59Q96AG4 307 aaKnown RBP18.63■□□□□ 0.57
NCKIPSD-203ENST00000415281 CCDC144AA2RUR9 1427 aa18.63■□□□□ 0.57
NCKIPSD-203ENST00000415281 SOS2Q07890 1332 aaPredicted RBP18.62■□□□□ 0.57
NCKIPSD-203ENST00000415281 TECPR2O15040 1411 aa18.6■□□□□ 0.57
NCKIPSD-203ENST00000415281 TMEM132EQ6IEE7 984 aa18.6■□□□□ 0.57
NCKIPSD-203ENST00000415281 WAPLQ7Z5K2 1190 aa18.6■□□□□ 0.57
NCKIPSD-203ENST00000415281 PIK3C2GO75747 1445 aa18.59■□□□□ 0.57
NCKIPSD-203ENST00000415281 PLEKHH1Q9ULM0 1364 aa18.59■□□□□ 0.57
NCKIPSD-203ENST00000415281 ZNF772Q68DY9 489 aaPredicted RBP18.59■□□□□ 0.57
NCKIPSD-203ENST00000415281 AFF2P51816 1311 aa18.58■□□□□ 0.57
NCKIPSD-203ENST00000415281 MEX3CQ5U5Q3 659 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms