RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 SLC26A8Q96RN1 970 aa23.73■■□□□ 1.39
ACTB-202ENST00000414620 SPHKAPQ2M3C7 1700 aa23.73■■□□□ 1.39
ACTB-202ENST00000414620 CHGAP10645 457 aaKnown RBP23.72■■□□□ 1.39
ACTB-202ENST00000414620 ZFYVE9O95405 1425 aa23.72■■□□□ 1.39
ACTB-202ENST00000414620 RRBP1Q9P2E9 1410 aaKnown RBP23.72■■□□□ 1.39
ACTB-202ENST00000414620 RIMS2Q9UQ26 1411 aa23.71■■□□□ 1.39
ACTB-202ENST00000414620 BCANQ96GW7 911 aa23.71■■□□□ 1.39
ACTB-202ENST00000414620 NWD1Q149M9 1564 aa23.7■■□□□ 1.38
ACTB-202ENST00000414620 CHD2O14647 1828 aaKnown RBP23.68■■□□□ 1.38
ACTB-202ENST00000414620 MED1Q15648 1581 aaPredicted RBP23.67■■□□□ 1.38
ACTB-202ENST00000414620 PPP1R15AO75807 674 aaPredicted RBP23.67■■□□□ 1.38
ACTB-202ENST00000414620 TMEM94Q12767 1356 aa23.65■■□□□ 1.38
ACTB-202ENST00000414620 PLEKHG1Q9ULL1 1385 aa23.65■■□□□ 1.38
ACTB-202ENST00000414620 KCNA6P17658 529 aa23.64■■□□□ 1.37
ACTB-202ENST00000414620 NUTM2DQ5VT03 806 aaPredicted RBP23.64■■□□□ 1.37
ACTB-202ENST00000414620 RBM33Q96EV2 1170 aaKnown RBP23.64■■□□□ 1.37
ACTB-202ENST00000414620 NKTRP30414 1462 aaKnown RBP23.62■■□□□ 1.37
ACTB-202ENST00000414620 PROSER2Q86WR7 435 aaPredicted RBP23.6■■□□□ 1.37
ACTB-202ENST00000414620 NAIPQ13075 1403 aa23.59■■□□□ 1.37
ACTB-202ENST00000414620 HDGFP51858 240 aaKnown RBP23.59■■□□□ 1.37
ACTB-202ENST00000414620 CLTCL1P53675 1640 aa23.59■■□□□ 1.37
ACTB-202ENST00000414620 ROBO1Q9Y6N7 1651 aa23.57■■□□□ 1.36
ACTB-202ENST00000414620 DIP2AQ14689 1571 aa23.57■■□□□ 1.36
ACTB-202ENST00000414620 KIF1BO60333 1816 aa23.56■■□□□ 1.36
ACTB-202ENST00000414620 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.56■■□□□ 1.363e-11■■■■□ 24.1
ACTB-202ENST00000414620 ADAMTS13Q76LX8 1427 aa23.55■■□□□ 1.36
ACTB-202ENST00000414620 NRXN3Q9Y4C0 1643 aa23.53■■□□□ 1.36
ACTB-202ENST00000414620 TRPM2O94759 1503 aa23.52■■□□□ 1.36
ACTB-202ENST00000414620 MSH6P52701 1360 aa23.51■■□□□ 1.35
ACTB-202ENST00000414620 TBX22Q9Y458 520 aa23.5■■□□□ 1.35
ACTB-202ENST00000414620 HFM1A2PYH4 1435 aa23.5■■□□□ 1.35
ACTB-202ENST00000414620 SOCS7O14512 581 aa23.49■■□□□ 1.35
ACTB-202ENST00000414620 ZNF326Q5BKZ1 582 aaKnown RBP23.48■■□□□ 1.35
ACTB-202ENST00000414620 TRIM52Q96A61 297 aa23.48■■□□□ 1.35
ACTB-202ENST00000414620 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
ACTB-202ENST00000414620 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.47■■□□□ 1.35
ACTB-202ENST00000414620 PHLPP1O60346 1717 aa23.46■■□□□ 1.35
ACTB-202ENST00000414620 NEXMIFQ5QGS0 1516 aa23.46■■□□□ 1.35
ACTB-202ENST00000414620 SETBP1Q9Y6X0 1596 aa23.46■■□□□ 1.35
ACTB-202ENST00000414620 PHF23Q9BUL5 403 aaPredicted RBP23.45■■□□□ 1.34
ACTB-202ENST00000414620 PTPRUQ92729 1446 aa23.44■■□□□ 1.34
ACTB-202ENST00000414620 XRN1Q8IZH2 1706 aaKnown RBP23.44■■□□□ 1.34
ACTB-202ENST00000414620 PIK3R4Q99570 1358 aa23.43■■□□□ 1.34
ACTB-202ENST00000414620 C14orf37Q86TY3 774 aa23.43■■□□□ 1.34
ACTB-202ENST00000414620 AMOTL2Q9Y2J4 779 aa23.39■■□□□ 1.33
ACTB-202ENST00000414620 SLC4A1APQ9BWU0 796 aaKnown RBP23.38■■□□□ 1.33
ACTB-202ENST00000414620 PPLO60437 1756 aa23.37■■□□□ 1.33
ACTB-202ENST00000414620 NCOA3Q9Y6Q9 1424 aa23.37■■□□□ 1.33
ACTB-202ENST00000414620 SLAIN2Q9P270 581 aa23.37■■□□□ 1.33
ACTB-202ENST00000414620 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
ACTB-202ENST00000414620 METP08581 1390 aa23.35■■□□□ 1.33
ACTB-202ENST00000414620 COL16A1Q07092 1604 aaPredicted RBP23.33■■□□□ 1.33
ACTB-202ENST00000414620 FOXD1Q16676 465 aa23.33■■□□□ 1.33
ACTB-202ENST00000414620 NALCNQ8IZF0 1738 aa23.32■■□□□ 1.32
ACTB-202ENST00000414620 ATF3P18847 181 aa23.3■■□□□ 1.32
ACTB-202ENST00000414620 C19orf44Q9H6X5 657 aa23.3■■□□□ 1.32
ACTB-202ENST00000414620 CADPS2Q86UW7 1296 aa23.29■■□□□ 1.32
ACTB-202ENST00000414620 AHDC1Q5TGY3 1603 aaPredicted RBP23.27■■□□□ 1.32
ACTB-202ENST00000414620 IFT172Q9UG01 1749 aa23.26■■□□□ 1.31
ACTB-202ENST00000414620 RGS17Q9UGC6 210 aaPredicted RBP23.24■■□□□ 1.31
ACTB-202ENST00000414620 JCADQ9P266 1359 aa23.24■■□□□ 1.31
ACTB-202ENST00000414620 DCCP43146 1447 aa23.24■■□□□ 1.31
ACTB-202ENST00000414620 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
ACTB-202ENST00000414620 VGFO15240 615 aaPredicted RBP23.22■■□□□ 1.31
ACTB-202ENST00000414620 CCDC144AA2RUR9 1427 aa23.22■■□□□ 1.31
ACTB-202ENST00000414620 ADGRL3Q9HAR2 1447 aa23.22■■□□□ 1.31
ACTB-202ENST00000414620 ASXL1Q8IXJ9 1541 aa23.22■■□□□ 1.31
ACTB-202ENST00000414620 NHSL1Q5SYE7 1610 aa23.22■■□□□ 1.31
ACTB-202ENST00000414620 MPHOSPH9Q99550 1183 aa23.21■■□□□ 1.31
ACTB-202ENST00000414620 MST1RQ04912 1400 aa23.21■■□□□ 1.31
ACTB-202ENST00000414620 RPGRIP1LQ68CZ1 1315 aa23.2■■□□□ 1.3
ACTB-202ENST00000414620 BRINP3Q76B58 766 aa23.19■■□□□ 1.3
ACTB-202ENST00000414620 PTCH1Q13635 1447 aa23.17■■□□□ 1.3
ACTB-202ENST00000414620 LRP6O75581 1613 aa23.17■■□□□ 1.3
ACTB-202ENST00000414620 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
ACTB-202ENST00000414620 RGL3Q3MIN7 710 aa23.16■■□□□ 1.3
ACTB-202ENST00000414620 ROBO2Q9HCK4 1378 aa23.15■■□□□ 1.3
ACTB-202ENST00000414620 SPATA31E1Q6ZUB1 1445 aa23.15■■□□□ 1.3
ACTB-202ENST00000414620 ADGRF5Q8IZF2 1346 aa23.13■■□□□ 1.29
ACTB-202ENST00000414620 POTEAQ6S8J7 498 aa23.13■■□□□ 1.29
ACTB-202ENST00000414620 PRAG1Q86YV5 1406 aa23.1■■□□□ 1.29
ACTB-202ENST00000414620 DDX17Q92841 729 aaKnown RBP23.1■■□□□ 1.29
ACTB-202ENST00000414620 RAB3GAP2Q9H2M9 1393 aa23.1■■□□□ 1.29
ACTB-202ENST00000414620 KNDC1Q76NI1 1749 aa23.1■■□□□ 1.29
ACTB-202ENST00000414620 SPATA31A6Q5VVP1 1343 aa23.09■■□□□ 1.29
ACTB-202ENST00000414620 MEX3CQ5U5Q3 659 aaKnown RBP23.08■■□□□ 1.29
ACTB-202ENST00000414620 C1orf167Q5SNV9 1468 aa23.08■■□□□ 1.29
ACTB-202ENST00000414620 ANKRD30BQ9BXX2 1392 aa23.07■■□□□ 1.28
ACTB-202ENST00000414620 NUTM2BA6NNL0 878 aaPredicted RBP23.05■■□□□ 1.28
ACTB-202ENST00000414620 NUTM2EB1AL46 878 aaPredicted RBP23.05■■□□□ 1.28
ACTB-202ENST00000414620 NUTM2AQ8IVF1 878 aaPredicted RBP23.05■■□□□ 1.28
ACTB-202ENST00000414620 PIK3C2GO75747 1445 aa23.05■■□□□ 1.28
ACTB-202ENST00000414620 STK26Q9P289 416 aa23.04■■□□□ 1.28
ACTB-202ENST00000414620 CDC42BPGQ6DT37 1551 aa23.04■■□□□ 1.28
ACTB-202ENST00000414620 LAMC1P11047 1609 aa23.04■■□□□ 1.28
ACTB-202ENST00000414620 TMEM132EQ6IEE7 984 aa23.01■■□□□ 1.27
ACTB-202ENST00000414620 ORAI2Q96SN7 254 aa23.01■■□□□ 1.27
ACTB-202ENST00000414620 ACIN1Q9UKV3 1341 aaKnown RBP23.01■■□□□ 1.27
ACTB-202ENST00000414620 LRPPRCP42704 1394 aaKnown RBP23■■□□□ 1.27
ACTB-202ENST00000414620 PNPLA6Q8IY17 1366 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms