RNA–Protein interactions for RNA: ENST00000413911.1

AC005540.1-201, humanhuman

TSL 3 BASIC

Gene AC005540.1, Length 919 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005540.1-201ENST00000413911 PHF23Q9BUL5 403 aaPredicted RBP37.64■■■■□ 3.62
AC005540.1-201ENST00000413911 NWD1Q149M9 1564 aa37.63■■■■□ 3.61
AC005540.1-201ENST00000413911 FAM135BQ49AJ0 1406 aa37.62■■■■□ 3.61
AC005540.1-201ENST00000413911 GCC2Q8IWJ2 1684 aa37.62■■■■□ 3.61
AC005540.1-201ENST00000413911 TMEM131LA2VDJ0 1609 aa37.61■■■■□ 3.61
AC005540.1-201ENST00000413911 ROCK1Q13464 1354 aa37.59■■■■□ 3.61
AC005540.1-201ENST00000413911 BCANQ96GW7 911 aa37.59■■■■□ 3.61
AC005540.1-201ENST00000413911 RIMS2Q9UQ26 1411 aa37.59■■■■□ 3.61
AC005540.1-201ENST00000413911 NKTRP30414 1462 aaKnown RBP37.58■■■■□ 3.61
AC005540.1-201ENST00000413911 PLEKHG1Q9ULL1 1385 aa37.57■■■■□ 3.61
AC005540.1-201ENST00000413911 E9PCH4 1651 aa37.57■■■■□ 3.61
AC005540.1-201ENST00000413911 IQGAP3Q86VI3 1631 aa37.51■■■■□ 3.6
AC005540.1-201ENST00000413911 ROBO1Q9Y6N7 1651 aa37.51■■■■□ 3.6
AC005540.1-201ENST00000413911 RGS17Q9UGC6 210 aaPredicted RBP37.51■■■■□ 3.6
AC005540.1-201ENST00000413911 PPP1R15AO75807 674 aaPredicted RBP37.5■■■■□ 3.59
AC005540.1-201ENST00000413911 PPARGC1BQ86YN6 1023 aaKnown RBP37.5■■■■□ 3.59
AC005540.1-201ENST00000413911 CHGAP10645 457 aaKnown RBP37.49■■■■□ 3.59
AC005540.1-201ENST00000413911 CHD2O14647 1828 aaKnown RBP37.49■■■■□ 3.59
AC005540.1-201ENST00000413911 ITGAEP38570 1179 aa37.48■■■■□ 3.59
AC005540.1-201ENST00000413911 NUTM2DQ5VT03 806 aaPredicted RBP37.47■■■■□ 3.59
AC005540.1-201ENST00000413911 NUP155O75694 1391 aa37.45■■■■□ 3.59
AC005540.1-201ENST00000413911 HDGFP51858 240 aaKnown RBP37.45■■■■□ 3.59
AC005540.1-201ENST00000413911 TBX22Q9Y458 520 aa37.44■■■■□ 3.58
AC005540.1-201ENST00000413911 ADAMTS13Q76LX8 1427 aa37.44■■■■□ 3.58
AC005540.1-201ENST00000413911 MSH6P52701 1360 aa37.43■■■■□ 3.58
AC005540.1-201ENST00000413911 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.41■■■■□ 3.58
AC005540.1-201ENST00000413911 SLAIN2Q9P270 581 aa37.39■■■■□ 3.58
AC005540.1-201ENST00000413911 DIP2AQ14689 1571 aa37.29■■■■□ 3.56
AC005540.1-201ENST00000413911 NCOA3Q9Y6Q9 1424 aa37.28■■■■□ 3.56
AC005540.1-201ENST00000413911 PTPRUQ92729 1446 aa37.27■■■■□ 3.56
AC005540.1-201ENST00000413911 PHLPP1O60346 1717 aa37.26■■■■□ 3.56
AC005540.1-201ENST00000413911 PIK3R4Q99570 1358 aa37.26■■■■□ 3.55
AC005540.1-201ENST00000413911 POTEAQ6S8J7 498 aa37.25■■■■□ 3.55
AC005540.1-201ENST00000413911 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.22■■■■□ 3.55
AC005540.1-201ENST00000413911 C14orf37Q86TY3 774 aa37.21■■■■□ 3.55
AC005540.1-201ENST00000413911 SPHKAPQ2M3C7 1700 aa37.21■■■■□ 3.55
AC005540.1-201ENST00000413911 TRPM2O94759 1503 aa37.2■■■■□ 3.55
AC005540.1-201ENST00000413911 AMOTL2Q9Y2J4 779 aa37.2■■■■□ 3.55
AC005540.1-201ENST00000413911 NRXN3Q9Y4C0 1643 aa37.2■■■■□ 3.55
AC005540.1-201ENST00000413911 COL16A1Q07092 1604 aaPredicted RBP37.19■■■■□ 3.54
AC005540.1-201ENST00000413911 C19orf44Q9H6X5 657 aa37.18■■■■□ 3.54
AC005540.1-201ENST00000413911 JCADQ9P266 1359 aa37.17■■■■□ 3.54
AC005540.1-201ENST00000413911 CADPS2Q86UW7 1296 aa37.14■■■■□ 3.54
AC005540.1-201ENST00000413911 RRBP1Q9P2E9 1410 aaKnown RBP37.13■■■■□ 3.53
AC005540.1-201ENST00000413911 SETBP1Q9Y6X0 1596 aa37.12■■■■□ 3.53
AC005540.1-201ENST00000413911 ATF3P18847 181 aa37.11■■■■□ 3.53
AC005540.1-201ENST00000413911 ZNF326Q5BKZ1 582 aaKnown RBP37.1■■■■□ 3.53
AC005540.1-201ENST00000413911 XRN1Q8IZH2 1706 aaKnown RBP37.1■■■■□ 3.53
AC005540.1-201ENST00000413911 NAIPQ13075 1403 aa37.1■■■■□ 3.53
AC005540.1-201ENST00000413911 CLTCL1P53675 1640 aa37.09■■■■□ 3.53
AC005540.1-201ENST00000413911 METP08581 1390 aa37.08■■■■□ 3.53
AC005540.1-201ENST00000413911 AHDC1Q5TGY3 1603 aaPredicted RBP37.07■■■■□ 3.52
AC005540.1-201ENST00000413911 LRP6O75581 1613 aa37.05■■■■□ 3.52
AC005540.1-201ENST00000413911 NEXMIFQ5QGS0 1516 aa37.04■■■■□ 3.52
AC005540.1-201ENST00000413911 BRINP3Q76B58 766 aa37.03■■■■□ 3.52
AC005540.1-201ENST00000413911 DCCP43146 1447 aa36.98■■■■□ 3.51
AC005540.1-201ENST00000413911 SPATA31A6Q5VVP1 1343 aa36.97■■■■□ 3.51
AC005540.1-201ENST00000413911 MST1RQ04912 1400 aa36.94■■■■□ 3.5
AC005540.1-201ENST00000413911 SHPRHQ149N8 1683 aa36.94■■■■□ 3.5
AC005540.1-201ENST00000413911 ASXL1Q8IXJ9 1541 aa36.92■■■■□ 3.5
AC005540.1-201ENST00000413911 KIF1BO60333 1816 aa36.91■■■■□ 3.5
AC005540.1-201ENST00000413911 SETD1AO15047 1707 aaKnown RBP36.9■■■■□ 3.5
AC005540.1-201ENST00000413911 HFM1A2PYH4 1435 aa36.89■■■■□ 3.5
AC005540.1-201ENST00000413911 TRIM52Q96A61 297 aa36.88■■■■□ 3.49
AC005540.1-201ENST00000413911 ADGRL3Q9HAR2 1447 aa36.87■■■■□ 3.49
AC005540.1-201ENST00000413911 MEX3CQ5U5Q3 659 aaKnown RBP36.86■■■■□ 3.49
AC005540.1-201ENST00000413911 NALCNQ8IZF0 1738 aa36.85■■■■□ 3.49
AC005540.1-201ENST00000413911 DDX17Q92841 729 aaKnown RBP36.83■■■■□ 3.49
AC005540.1-201ENST00000413911 NHSL1Q5SYE7 1610 aa36.83■■■■□ 3.49
AC005540.1-201ENST00000413911 SETD5Q9C0A6 1442 aa36.82■■■■□ 3.48
AC005540.1-201ENST00000413911 NUTM2BA6NNL0 878 aaPredicted RBP36.8■■■■□ 3.48
AC005540.1-201ENST00000413911 NUTM2EB1AL46 878 aaPredicted RBP36.8■■■■□ 3.48
AC005540.1-201ENST00000413911 NUTM2AQ8IVF1 878 aaPredicted RBP36.8■■■■□ 3.48
AC005540.1-201ENST00000413911 SLC4A1APQ9BWU0 796 aaKnown RBP36.8■■■■□ 3.48
AC005540.1-201ENST00000413911 VGFO15240 615 aaPredicted RBP36.78■■■■□ 3.48
AC005540.1-201ENST00000413911 ZNF772Q68DY9 489 aaPredicted RBP36.78■■■■□ 3.48
AC005540.1-201ENST00000413911 ROBO2Q9HCK4 1378 aa36.78■■■■□ 3.48
AC005540.1-201ENST00000413911 PTCH1Q13635 1447 aa36.74■■■■□ 3.47
AC005540.1-201ENST00000413911 FOXD1Q16676 465 aa36.73■■■■□ 3.47
AC005540.1-201ENST00000413911 C1orf167Q5SNV9 1468 aa36.72■■■■□ 3.47
AC005540.1-201ENST00000413911 RPGRIP1LQ68CZ1 1315 aa36.72■■■■□ 3.47
AC005540.1-201ENST00000413911 LRRC59Q96AG4 307 aaKnown RBP36.72■■■■□ 3.47
AC005540.1-201ENST00000413911 PPLO60437 1756 aa36.7■■■■□ 3.47
AC005540.1-201ENST00000413911 PNPLA6Q8IY17 1366 aa36.68■■■■□ 3.46
AC005540.1-201ENST00000413911 PRAG1Q86YV5 1406 aa36.68■■■■□ 3.46
AC005540.1-201ENST00000413911 AFF2P51816 1311 aa36.65■■■■□ 3.46
AC005540.1-201ENST00000413911 ORAI2Q96SN7 254 aa36.65■■■■□ 3.46
AC005540.1-201ENST00000413911 RXRBP28702 533 aa36.62■■■■□ 3.45
AC005540.1-201ENST00000413911 LAMC1P11047 1609 aa36.61■■■■□ 3.45
AC005540.1-201ENST00000413911 ADGRF5Q8IZF2 1346 aa36.59■■■■□ 3.45
AC005540.1-201ENST00000413911 UPF1Q92900 1129 aaKnown RBP eCLIP36.58■■■■□ 3.45
AC005540.1-201ENST00000413911 C8orf37Q96NL8 207 aa36.57■■■■□ 3.44
AC005540.1-201ENST00000413911 SOS2Q07890 1332 aaPredicted RBP36.57■■■■□ 3.44
AC005540.1-201ENST00000413911 SPATA31E1Q6ZUB1 1445 aa36.55■■■■□ 3.44
AC005540.1-201ENST00000413911 RGL3Q3MIN7 710 aa36.53■■■■□ 3.44
AC005540.1-201ENST00000413911 MPHOSPH9Q99550 1183 aa36.53■■■■□ 3.44
AC005540.1-201ENST00000413911 CCDC144AA2RUR9 1427 aa36.52■■■■□ 3.44
AC005540.1-201ENST00000413911 CDK12Q9NYV4 1490 aaPredicted RBP36.52■■■■□ 3.44
AC005540.1-201ENST00000413911 ADAMTS2O95450 1211 aa36.49■■■■□ 3.43
AC005540.1-201ENST00000413911 QTRT2Q9H974 415 aaKnown RBP36.48■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms