RNA–Protein interactions for RNA: ENST00000413833.1

LINC00421-201, long intergenic non-protein coding RNA 421, humanhuman

TSL 1 (best) BASIC

Gene LINC00421, Length 1,054 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00421-201ENST00000413833 PROSER2Q86WR7 435 aaPredicted RBP28.22■■■□□ 2.11
LINC00421-201ENST00000413833 ZFYVE9O95405 1425 aa28.2■■■□□ 2.11
LINC00421-201ENST00000413833 SLC52A1Q9NWF4 448 aa28.18■■■□□ 2.1
LINC00421-201ENST00000413833 RPRD2Q5VT52 1461 aaKnown RBP28.17■■■□□ 2.1
LINC00421-201ENST00000413833 PHLPP1O60346 1717 aa28.17■■■□□ 2.1
LINC00421-201ENST00000413833 GCC2Q8IWJ2 1684 aa28.16■■■□□ 2.1
LINC00421-201ENST00000413833 TMEM131LA2VDJ0 1609 aa28.14■■■□□ 2.1
LINC00421-201ENST00000413833 PLEKHG1Q9ULL1 1385 aa28.13■■■□□ 2.09
LINC00421-201ENST00000413833 MSH6P52701 1360 aa28.12■■■□□ 2.09
LINC00421-201ENST00000413833 COL16A1Q07092 1604 aaPredicted RBP28.1■■■□□ 2.09
LINC00421-201ENST00000413833 SLAIN2Q9P270 581 aa28.1■■■□□ 2.09
LINC00421-201ENST00000413833 SETD1AO15047 1707 aaKnown RBP28.09■■■□□ 2.09
LINC00421-201ENST00000413833 APLP2Q06481 763 aa28.09■■■□□ 2.09
LINC00421-201ENST00000413833 ANKRD50Q9ULJ7 1429 aa28.09■■■□□ 2.09
LINC00421-201ENST00000413833 RIMS2Q9UQ26 1411 aa28.09■■■□□ 2.09
LINC00421-201ENST00000413833 UNC13BO14795 1591 aa28.05■■■□□ 2.08
LINC00421-201ENST00000413833 JCADQ9P266 1359 aa28.05■■■□□ 2.08
LINC00421-201ENST00000413833 NCOA3Q9Y6Q9 1424 aa28.04■■■□□ 2.08
LINC00421-201ENST00000413833 E9PCH4 1651 aa28.03■■■□□ 2.08
LINC00421-201ENST00000413833 ADAMTS13Q76LX8 1427 aa28.02■■■□□ 2.08
LINC00421-201ENST00000413833 BCANQ96GW7 911 aa28.02■■■□□ 2.08
LINC00421-201ENST00000413833 TBX22Q9Y458 520 aa28.02■■■□□ 2.08
LINC00421-201ENST00000413833 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.01■■■□□ 2.07
LINC00421-201ENST00000413833 LRP6O75581 1613 aa28■■■□□ 2.07
LINC00421-201ENST00000413833 DIP2AQ14689 1571 aa27.99■■■□□ 2.07
LINC00421-201ENST00000413833 AHDC1Q5TGY3 1603 aaPredicted RBP27.98■■■□□ 2.07
LINC00421-201ENST00000413833 SHPRHQ149N8 1683 aa27.96■■■□□ 2.07
LINC00421-201ENST00000413833 PPP1R15AO75807 674 aaPredicted RBP27.95■■■□□ 2.06
LINC00421-201ENST00000413833 HDGFP51858 240 aaKnown RBP27.95■■■□□ 2.06
LINC00421-201ENST00000413833 IQGAP3Q86VI3 1631 aa27.94■■■□□ 2.06
LINC00421-201ENST00000413833 FAM50AQ14320 339 aaKnown RBP27.94■■■□□ 2.06
LINC00421-201ENST00000413833 PIK3R4Q99570 1358 aa27.93■■■□□ 2.06
LINC00421-201ENST00000413833 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.92■■■□□ 2.06
LINC00421-201ENST00000413833 SPATA31A6Q5VVP1 1343 aa27.91■■■□□ 2.06
LINC00421-201ENST00000413833 PTPRUQ92729 1446 aa27.9■■■□□ 2.06
LINC00421-201ENST00000413833 NUTM2DQ5VT03 806 aaPredicted RBP27.88■■■□□ 2.05
LINC00421-201ENST00000413833 C19orf44Q9H6X5 657 aa27.88■■■□□ 2.05
LINC00421-201ENST00000413833 CADPS2Q86UW7 1296 aa27.87■■■□□ 2.05
LINC00421-201ENST00000413833 TRPM2O94759 1503 aa27.87■■■□□ 2.05
LINC00421-201ENST00000413833 NRXN3Q9Y4C0 1643 aa27.86■■■□□ 2.05
LINC00421-201ENST00000413833 XRN1Q8IZH2 1706 aaKnown RBP27.85■■■□□ 2.05
LINC00421-201ENST00000413833 CHGAP10645 457 aaKnown RBP27.85■■■□□ 2.05
LINC00421-201ENST00000413833 ROCK1Q13464 1354 aa27.84■■■□□ 2.05
LINC00421-201ENST00000413833 C14orf37Q86TY3 774 aa27.82■■■□□ 2.04
LINC00421-201ENST00000413833 BRINP3Q76B58 766 aa27.81■■■□□ 2.04
LINC00421-201ENST00000413833 DCCP43146 1447 aa27.81■■■□□ 2.04
LINC00421-201ENST00000413833 ATF3P18847 181 aa27.8■■■□□ 2.04
LINC00421-201ENST00000413833 AMOTL2Q9Y2J4 779 aa27.8■■■□□ 2.04
LINC00421-201ENST00000413833 NHSL1Q5SYE7 1610 aa27.79■■■□□ 2.04
LINC00421-201ENST00000413833 SETBP1Q9Y6X0 1596 aa27.79■■■□□ 2.04
LINC00421-201ENST00000413833 ZNF772Q68DY9 489 aaPredicted RBP27.79■■■□□ 2.04
LINC00421-201ENST00000413833 UPF1Q92900 1129 aaKnown RBP eCLIP27.79■■■□□ 2.04
LINC00421-201ENST00000413833 ASXL1Q8IXJ9 1541 aa27.77■■■□□ 2.04
LINC00421-201ENST00000413833 SPHKAPQ2M3C7 1700 aa27.75■■■□□ 2.03
LINC00421-201ENST00000413833 MEX3CQ5U5Q3 659 aaKnown RBP27.75■■■□□ 2.03
LINC00421-201ENST00000413833 MST1RQ04912 1400 aa27.75■■■□□ 2.03
LINC00421-201ENST00000413833 SETD5Q9C0A6 1442 aa27.74■■■□□ 2.03
LINC00421-201ENST00000413833 NUP155O75694 1391 aa27.73■■■□□ 2.03
LINC00421-201ENST00000413833 CDK12Q9NYV4 1490 aaPredicted RBP27.72■■■□□ 2.03
LINC00421-201ENST00000413833 TRIM52Q96A61 297 aa27.72■■■□□ 2.03
LINC00421-201ENST00000413833 METP08581 1390 aa27.69■■■□□ 2.02
LINC00421-201ENST00000413833 NALCNQ8IZF0 1738 aa27.67■■■□□ 2.02
LINC00421-201ENST00000413833 RXRBP28702 533 aa27.67■■■□□ 2.02
LINC00421-201ENST00000413833 NEXMIFQ5QGS0 1516 aa27.64■■■□□ 2.02
LINC00421-201ENST00000413833 NUTM2BA6NNL0 878 aaPredicted RBP27.64■■■□□ 2.02
LINC00421-201ENST00000413833 NUTM2EB1AL46 878 aaPredicted RBP27.64■■■□□ 2.02
LINC00421-201ENST00000413833 NUTM2AQ8IVF1 878 aaPredicted RBP27.64■■■□□ 2.02
LINC00421-201ENST00000413833 ADGRL3Q9HAR2 1447 aa27.64■■■□□ 2.02
LINC00421-201ENST00000413833 AFF2P51816 1311 aa27.64■■■□□ 2.01
LINC00421-201ENST00000413833 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
LINC00421-201ENST00000413833 LAMC1P11047 1609 aa27.61■■■□□ 2.01
LINC00421-201ENST00000413833 PNPLA6Q8IY17 1366 aa27.6■■■□□ 2.01
LINC00421-201ENST00000413833 DDX17Q92841 729 aaKnown RBP27.59■■■□□ 2.01
LINC00421-201ENST00000413833 LRRC59Q96AG4 307 aaKnown RBP27.59■■■□□ 2.01
LINC00421-201ENST00000413833 RGS12O14924 1447 aa27.57■■■□□ 2
LINC00421-201ENST00000413833 KIF1BO60333 1816 aa27.55■■■□□ 2
LINC00421-201ENST00000413833 ZNF326Q5BKZ1 582 aaKnown RBP27.54■■■□□ 2
LINC00421-201ENST00000413833 C1orf167Q5SNV9 1468 aa27.53■■■□□ 2
LINC00421-201ENST00000413833 ITGAEP38570 1179 aa27.53■■■□□ 2
LINC00421-201ENST00000413833 C8orf37Q96NL8 207 aa27.5■■□□□ 1.99
LINC00421-201ENST00000413833 QTRT2Q9H974 415 aaKnown RBP27.5■■□□□ 1.99
LINC00421-201ENST00000413833 RBM6P78332 1123 aaKnown RBP27.49■■□□□ 1.99
LINC00421-201ENST00000413833 PTCH1Q13635 1447 aa27.49■■□□□ 1.99
LINC00421-201ENST00000413833 PRAG1Q86YV5 1406 aa27.49■■□□□ 1.99
LINC00421-201ENST00000413833 SOS2Q07890 1332 aaPredicted RBP27.45■■□□□ 1.99
LINC00421-201ENST00000413833 ROBO2Q9HCK4 1378 aa27.45■■□□□ 1.98
LINC00421-201ENST00000413833 SRCAPQ6ZRS2 3230 aa27.43■■□□□ 1.98
LINC00421-201ENST00000413833 COL22A1Q8NFW1 1626 aaPredicted RBP27.43■■□□□ 1.98
LINC00421-201ENST00000413833 ORAI2Q96SN7 254 aa27.42■■□□□ 1.98
LINC00421-201ENST00000413833 NAIPQ13075 1403 aa27.4■■□□□ 1.98
LINC00421-201ENST00000413833 PPLO60437 1756 aa27.4■■□□□ 1.98
LINC00421-201ENST00000413833 ADAMTS2O95450 1211 aa27.39■■□□□ 1.98
LINC00421-201ENST00000413833 NGLY1Q96IV0 654 aa27.38■■□□□ 1.97
LINC00421-201ENST00000413833 EP400Q96L91 3159 aa27.37■■□□□ 1.97
LINC00421-201ENST00000413833 PPARGC1BQ86YN6 1023 aaKnown RBP27.36■■□□□ 1.97
LINC00421-201ENST00000413833 FNBP4Q8N3X1 1017 aaPredicted RBP27.35■■□□□ 1.97
LINC00421-201ENST00000413833 MARF1Q9Y4F3 1742 aaKnown RBP27.34■■□□□ 1.97
LINC00421-201ENST00000413833 VGFO15240 615 aaPredicted RBP27.34■■□□□ 1.97
LINC00421-201ENST00000413833 HFM1A2PYH4 1435 aa27.33■■□□□ 1.97
LINC00421-201ENST00000413833 ATRNO75882 1429 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms