RNA–Protein interactions for RNA: ENST00000412164.1

HMGN2P35-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 35, humanhuman

BASIC

Gene HMGN2P35, Length 270 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P35-201ENST00000412164 RAI14Q9P0K7 980 aa3.46□□□□□ -1.86
HMGN2P35-201ENST00000412164 PCDHB8Q9UN66 801 aa3.46□□□□□ -1.86
HMGN2P35-201ENST00000412164 RIPOR2Q9Y4F9 1068 aa3.46□□□□□ -1.86
HMGN2P35-201ENST00000412164 MYBPC2Q14324 1141 aa3.45□□□□□ -1.86
HMGN2P35-201ENST00000412164 GSE1Q14687 1217 aa3.45□□□□□ -1.86
HMGN2P35-201ENST00000412164 CCDC125Q86Z20 511 aa3.45□□□□□ -1.86
HMGN2P35-201ENST00000412164 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.45□□□□□ -1.86
HMGN2P35-201ENST00000412164 FAM9BQ8IZU0 186 aa3.45□□□□□ -1.86
HMGN2P35-201ENST00000412164 GOLGA6L3A6NEY3 463 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 LETM1O95202 739 aaPredicted RBP3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 RBM25P49756 843 aaKnown RBP3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 MAP2K1Q02750 393 aaPredicted RBP3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 MTA1Q13330 715 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 FKBP8Q14318 412 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 SETDB1Q15047 1291 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 DCAF8Q5TAQ9 597 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 FOXD4L5Q5VV16 416 aaPredicted RBP3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 NBPF6Q5VWK0 638 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 SPTY2D1Q68D10 685 aaPredicted RBP3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 ANKRD23Q86SG2 305 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 NBPF5PQ86XG9 351 aaPredicted RBP3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 SDR16C5Q8N3Y7 309 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 NME8Q8N427 588 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 FOXD4L4Q8WXT5 416 aaPredicted RBP3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 NBPF4Q96M43 638 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 TSPAN18Q96SJ8 248 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 TERF2IPQ9NYB0 399 aa3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 ZHX1Q9UKY1 873 aaPredicted RBP3.44□□□□□ -1.86
HMGN2P35-201ENST00000412164 NRDCO43847 1150 aa3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 ZNF500O60304 480 aaPredicted RBP3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 ZSCAN20P17040 1043 aaPredicted RBP3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 TERF1P54274 439 aa3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 EMP3P54852 163 aa3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 SATB1Q01826 763 aa3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 ZKSCAN8Q15776 578 aaPredicted RBP3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 DNAJC14Q6Y2X3 702 aaPredicted RBP3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 ARHGEF1Q92888 912 aaKnown RBP3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 IPO9Q96P70 1041 aaKnown RBP3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 HS3ST6Q96QI5 342 aa3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 GTPBP4Q9BZE4 634 aaKnown RBP3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 PNNQ9H307 717 aaKnown RBP3.43□□□□□ -1.86
HMGN2P35-201ENST00000412164 PRDM2Q13029 1718 aa3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 GOLIM4O00461 696 aa3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 ARID4AP29374 1257 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 FOXD4L6Q3SYB3 417 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 DNTTIP2Q5QJE6 756 aaKnown RBP3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 FOXD4L3Q6VB84 417 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 MTERF4Q7Z6M4 381 aaKnown RBP3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 ILDR1Q86SU0 546 aaPredicted RBP3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 DCAF11Q8TEB1 546 aa3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 BORCS6Q96GS4 357 aa3.42□□□□□ -1.86
HMGN2P35-201ENST00000412164 FAM205CA6NFA0 338 aa3.41□□□□□ -1.86
HMGN2P35-201ENST00000412164 BRD1O95696 1058 aa3.41□□□□□ -1.86
HMGN2P35-201ENST00000412164 BRPF1P55201 1214 aaPredicted RBP3.41□□□□□ -1.86
HMGN2P35-201ENST00000412164 HDAC1Q13547 482 aaPredicted RBP3.41□□□□□ -1.86
HMGN2P35-201ENST00000412164 C3orf67Q6ZVT6 689 aa3.41□□□□□ -1.86
HMGN2P35-201ENST00000412164 MPNDQ8N594 471 aa3.41□□□□□ -1.86
HMGN2P35-201ENST00000412164 DNAJC5Q9H3Z4 198 aa3.41□□□□□ -1.86
HMGN2P35-201ENST00000412164 E9PSI1 815 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 HOXB3P14651 431 aaPredicted RBP3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 SCP2P22307 547 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 SSR1P43307 286 aaKnown RBP3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 TNNT2P45379 298 aaPredicted RBP3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 UVSSAQ2YD98 709 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 RGL3Q3MIN7 710 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 DDX46Q7L014 1031 aaKnown RBP3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 ZNF467Q7Z7K2 595 aaPredicted RBP3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 P3H3Q8IVL6 736 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 MSL3Q8N5Y2 521 aaKnown RBP3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 BANK1Q8NDB2 785 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 RNF217Q8TC41 542 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 ITFG2Q969R8 447 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 L3MBTL3Q96JM7 780 aaPredicted RBP3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 FEZ2Q9UHY8 353 aaPredicted RBP3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 NUB1Q9Y5A7 615 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 RPS6KL1Q9Y6S9 549 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 SCRIBQ14160 1630 aa3.4□□□□□ -1.87
HMGN2P35-201ENST00000412164 TESPA1A2RU30 521 aaPredicted RBP3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 ERCC3P19447 782 aa3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 MKRN3Q13064 507 aaKnown RBP3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 DPY19L2Q6NUT2 758 aa3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 ARMCX6Q7L4S7 300 aa3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 FRAT1Q92837 279 aaPredicted RBP3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 MTA3Q9BTC8 594 aa3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 EFCC1Q9HA90 598 aa3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 RBM28Q9NW13 759 aaKnown RBP3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 STK26Q9P289 416 aa3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 CEP83Q9Y592 693 aa3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 NCAPD3P42695 1498 aa3.39□□□□□ -1.87
HMGN2P35-201ENST00000412164 GOLGA6CA6NDK9 693 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 GOLGA6BA6NDN3 693 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 GOLGA6DP0CG33 693 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 CALRP27797 417 aaKnown RBP3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 SSFA2P28290 1259 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 MFAP1P55081 439 aaKnown RBP3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 GOLGA2Q08379 1002 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 LMOD3Q0VAK6 560 aa3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 CT47A1Q5JQC4 288 aaPredicted RBP3.38□□□□□ -1.87
HMGN2P35-201ENST00000412164 CACTIN-AS1Q8N1I8 211 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms