RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 SOCS7O14512 581 aa25.46■■□□□ 1.67
SCAMP4-203ENST00000411971 ITGAEP38570 1179 aa25.45■■□□□ 1.66
SCAMP4-203ENST00000411971 SLC52A1Q9NWF4 448 aa25.45■■□□□ 1.66
SCAMP4-203ENST00000411971 RBM33Q96EV2 1170 aaKnown RBP25.44■■□□□ 1.66
SCAMP4-203ENST00000411971 NWD1Q149M9 1564 aa25.42■■□□□ 1.66
SCAMP4-203ENST00000411971 TMEM94Q12767 1356 aa25.41■■□□□ 1.66
SCAMP4-203ENST00000411971 CHD2O14647 1828 aaKnown RBP25.4■■□□□ 1.66
SCAMP4-203ENST00000411971 RIMS2Q9UQ26 1411 aa25.39■■□□□ 1.66
SCAMP4-203ENST00000411971 KCNA6P17658 529 aa25.39■■□□□ 1.66
SCAMP4-203ENST00000411971 NUP155O75694 1391 aa25.35■■□□□ 1.65
SCAMP4-203ENST00000411971 PLEKHG1Q9ULL1 1385 aa25.35■■□□□ 1.65
SCAMP4-203ENST00000411971 NUTM2DQ5VT03 806 aaPredicted RBP25.34■■□□□ 1.65
SCAMP4-203ENST00000411971 PROSER2Q86WR7 435 aaPredicted RBP25.32■■□□□ 1.64
SCAMP4-203ENST00000411971 NKTRP30414 1462 aaKnown RBP25.32■■□□□ 1.64
SCAMP4-203ENST00000411971 CHGAP10645 457 aaKnown RBP25.31■■□□□ 1.64
SCAMP4-203ENST00000411971 ROBO1Q9Y6N7 1651 aa25.31■■□□□ 1.64
SCAMP4-203ENST00000411971 ADAMTS13Q76LX8 1427 aa25.3■■□□□ 1.64
SCAMP4-203ENST00000411971 BCANQ96GW7 911 aa25.3■■□□□ 1.64
SCAMP4-203ENST00000411971 SPHKAPQ2M3C7 1700 aa25.29■■□□□ 1.64
SCAMP4-203ENST00000411971 FAM135BQ49AJ0 1406 aa25.28■■□□□ 1.64
SCAMP4-203ENST00000411971 RRBP1Q9P2E9 1410 aaKnown RBP25.28■■□□□ 1.64
SCAMP4-203ENST00000411971 PPP1R15AO75807 674 aaPredicted RBP25.25■■□□□ 1.63
SCAMP4-203ENST00000411971 NRXN3Q9Y4C0 1643 aa25.24■■□□□ 1.63
SCAMP4-203ENST00000411971 TBX22Q9Y458 520 aa25.23■■□□□ 1.63
SCAMP4-203ENST00000411971 NAIPQ13075 1403 aa25.21■■□□□ 1.63
SCAMP4-203ENST00000411971 CLTCL1P53675 1640 aa25.21■■□□□ 1.63
SCAMP4-203ENST00000411971 PTPRUQ92729 1446 aa25.2■■□□□ 1.63
SCAMP4-203ENST00000411971 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.19■■□□□ 1.62
SCAMP4-203ENST00000411971 RGS17Q9UGC6 210 aaPredicted RBP25.19■■□□□ 1.62
SCAMP4-203ENST00000411971 DIP2AQ14689 1571 aa25.18■■□□□ 1.62
SCAMP4-203ENST00000411971 HDGFP51858 240 aaKnown RBP25.17■■□□□ 1.62
SCAMP4-203ENST00000411971 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.17■■□□□ 1.62
SCAMP4-203ENST00000411971 MSH6P52701 1360 aa25.17■■□□□ 1.62
SCAMP4-203ENST00000411971 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
SCAMP4-203ENST00000411971 PHLPP1O60346 1717 aa25.15■■□□□ 1.62
SCAMP4-203ENST00000411971 SLAIN2Q9P270 581 aa25.14■■□□□ 1.62
SCAMP4-203ENST00000411971 TRPM2O94759 1503 aa25.12■■□□□ 1.61
SCAMP4-203ENST00000411971 XRN1Q8IZH2 1706 aaKnown RBP25.12■■□□□ 1.61
SCAMP4-203ENST00000411971 SETBP1Q9Y6X0 1596 aa25.12■■□□□ 1.61
SCAMP4-203ENST00000411971 NEXMIFQ5QGS0 1516 aa25.12■■□□□ 1.61
SCAMP4-203ENST00000411971 PIK3R4Q99570 1358 aa25.1■■□□□ 1.61
SCAMP4-203ENST00000411971 COL16A1Q07092 1604 aaPredicted RBP25.09■■□□□ 1.61
SCAMP4-203ENST00000411971 AMOTL2Q9Y2J4 779 aa25.09■■□□□ 1.61
SCAMP4-203ENST00000411971 KIF1BO60333 1816 aa25.09■■□□□ 1.61
SCAMP4-203ENST00000411971 HFM1A2PYH4 1435 aa25.07■■□□□ 1.6
SCAMP4-203ENST00000411971 NCOA3Q9Y6Q9 1424 aa25.07■■□□□ 1.6
SCAMP4-203ENST00000411971 METP08581 1390 aa25.06■■□□□ 1.6
SCAMP4-203ENST00000411971 ZNF326Q5BKZ1 582 aaKnown RBP25.05■■□□□ 1.6
SCAMP4-203ENST00000411971 SETD1AO15047 1707 aaKnown RBP25.03■■□□□ 1.6
SCAMP4-203ENST00000411971 C14orf37Q86TY3 774 aa25.02■■□□□ 1.6
SCAMP4-203ENST00000411971 POTEAQ6S8J7 498 aa25.01■■□□□ 1.59
SCAMP4-203ENST00000411971 C19orf44Q9H6X5 657 aa25.01■■□□□ 1.59
SCAMP4-203ENST00000411971 AHDC1Q5TGY3 1603 aaPredicted RBP24.99■■□□□ 1.59
SCAMP4-203ENST00000411971 TRIM52Q96A61 297 aa24.99■■□□□ 1.59
SCAMP4-203ENST00000411971 NALCNQ8IZF0 1738 aa24.98■■□□□ 1.59
SCAMP4-203ENST00000411971 LRP6O75581 1613 aa24.97■■□□□ 1.59
SCAMP4-203ENST00000411971 PPLO60437 1756 aa24.96■■□□□ 1.59
SCAMP4-203ENST00000411971 FOXD1Q16676 465 aa24.96■■□□□ 1.59
SCAMP4-203ENST00000411971 JCADQ9P266 1359 aa24.95■■□□□ 1.59
SCAMP4-203ENST00000411971 CADPS2Q86UW7 1296 aa24.95■■□□□ 1.58
SCAMP4-203ENST00000411971 ATF3P18847 181 aa24.94■■□□□ 1.58
SCAMP4-203ENST00000411971 BRINP3Q76B58 766 aa24.94■■□□□ 1.58
SCAMP4-203ENST00000411971 SLC4A1APQ9BWU0 796 aaKnown RBP24.93■■□□□ 1.58
SCAMP4-203ENST00000411971 MST1RQ04912 1400 aa24.93■■□□□ 1.58
SCAMP4-203ENST00000411971 SHPRHQ149N8 1683 aa24.92■■□□□ 1.58
SCAMP4-203ENST00000411971 DCCP43146 1447 aa24.91■■□□□ 1.58
SCAMP4-203ENST00000411971 ASXL1Q8IXJ9 1541 aa24.91■■□□□ 1.58
SCAMP4-203ENST00000411971 NHSL1Q5SYE7 1610 aa24.9■■□□□ 1.58
SCAMP4-203ENST00000411971 ADGRL3Q9HAR2 1447 aa24.88■■□□□ 1.57
SCAMP4-203ENST00000411971 ROBO2Q9HCK4 1378 aa24.86■■□□□ 1.57
SCAMP4-203ENST00000411971 DDX17Q92841 729 aaKnown RBP24.86■■□□□ 1.57
SCAMP4-203ENST00000411971 IFT172Q9UG01 1749 aa24.83■■□□□ 1.57
SCAMP4-203ENST00000411971 VGFO15240 615 aaPredicted RBP24.81■■□□□ 1.56
SCAMP4-203ENST00000411971 PTCH1Q13635 1447 aa24.8■■□□□ 1.56
SCAMP4-203ENST00000411971 SPATA31A6Q5VVP1 1343 aa24.8■■□□□ 1.56
SCAMP4-203ENST00000411971 SPATA31E1Q6ZUB1 1445 aa24.79■■□□□ 1.56
SCAMP4-203ENST00000411971 RPGRIP1LQ68CZ1 1315 aa24.79■■□□□ 1.56
SCAMP4-203ENST00000411971 ADGRF5Q8IZF2 1346 aa24.79■■□□□ 1.56
SCAMP4-203ENST00000411971 PRAG1Q86YV5 1406 aa24.78■■□□□ 1.56
SCAMP4-203ENST00000411971 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
SCAMP4-203ENST00000411971 MPHOSPH9Q99550 1183 aa24.78■■□□□ 1.56
SCAMP4-203ENST00000411971 C1orf167Q5SNV9 1468 aa24.77■■□□□ 1.56
SCAMP4-203ENST00000411971 LAMC1P11047 1609 aa24.75■■□□□ 1.55
SCAMP4-203ENST00000411971 NUTM2BA6NNL0 878 aaPredicted RBP24.74■■□□□ 1.55
SCAMP4-203ENST00000411971 NUTM2EB1AL46 878 aaPredicted RBP24.74■■□□□ 1.55
SCAMP4-203ENST00000411971 RGL3Q3MIN7 710 aa24.74■■□□□ 1.55
SCAMP4-203ENST00000411971 NUTM2AQ8IVF1 878 aaPredicted RBP24.74■■□□□ 1.55
SCAMP4-203ENST00000411971 CCDC144AA2RUR9 1427 aa24.74■■□□□ 1.55
SCAMP4-203ENST00000411971 ORAI2Q96SN7 254 aa24.73■■□□□ 1.55
SCAMP4-203ENST00000411971 PNPLA6Q8IY17 1366 aa24.71■■□□□ 1.55
SCAMP4-203ENST00000411971 MEX3CQ5U5Q3 659 aaKnown RBP24.71■■□□□ 1.55
SCAMP4-203ENST00000411971 LRRC59Q96AG4 307 aaKnown RBP24.66■■□□□ 1.54
SCAMP4-203ENST00000411971 KNDC1Q76NI1 1749 aa24.66■■□□□ 1.54
SCAMP4-203ENST00000411971 PLEKHH1Q9ULM0 1364 aa24.66■■□□□ 1.54
SCAMP4-203ENST00000411971 PIK3C2GO75747 1445 aa24.65■■□□□ 1.54
SCAMP4-203ENST00000411971 CDC42BPGQ6DT37 1551 aa24.65■■□□□ 1.54
SCAMP4-203ENST00000411971 TMEM132EQ6IEE7 984 aa24.65■■□□□ 1.54
SCAMP4-203ENST00000411971 WAPLQ7Z5K2 1190 aa24.64■■□□□ 1.54
SCAMP4-203ENST00000411971 STK26Q9P289 416 aa24.64■■□□□ 1.54
SCAMP4-203ENST00000411971 SOS2Q07890 1332 aaPredicted RBP24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms