RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 RGS17Q9UGC6 210 aaPredicted RBP25.82■■□□□ 1.72
MRPL55-220ENST00000411464 RPRD2Q5VT52 1461 aaKnown RBP25.82■■□□□ 1.72
MRPL55-220ENST00000411464 MSH6P52701 1360 aa25.79■■□□□ 1.72
MRPL55-220ENST00000411464 XIRP1Q702N8 1843 aaKnown RBP25.79■■□□□ 1.72
MRPL55-220ENST00000411464 NKTRP30414 1462 aaKnown RBP25.78■■□□□ 1.72
MRPL55-220ENST00000411464 CHGAP10645 457 aaKnown RBP25.77■■□□□ 1.72
MRPL55-220ENST00000411464 SLAIN2Q9P270 581 aa25.77■■□□□ 1.72
MRPL55-220ENST00000411464 PLEKHG1Q9ULL1 1385 aa25.77■■□□□ 1.72
MRPL55-220ENST00000411464 RIMS2Q9UQ26 1411 aa25.75■■□□□ 1.71
MRPL55-220ENST00000411464 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.75■■□□□ 1.71
MRPL55-220ENST00000411464 ZFYVE9O95405 1425 aa25.74■■□□□ 1.71
MRPL55-220ENST00000411464 TBX22Q9Y458 520 aa25.73■■□□□ 1.71
MRPL55-220ENST00000411464 NWD1Q149M9 1564 aa25.7■■□□□ 1.71
MRPL55-220ENST00000411464 C14orf37Q86TY3 774 aa25.7■■□□□ 1.7
MRPL55-220ENST00000411464 POTEAQ6S8J7 498 aa25.69■■□□□ 1.7
MRPL55-220ENST00000411464 ROBO1Q9Y6N7 1651 aa25.68■■□□□ 1.7
MRPL55-220ENST00000411464 NUTM2DQ5VT03 806 aaPredicted RBP25.68■■□□□ 1.7
MRPL55-220ENST00000411464 ROCK1Q13464 1354 aa25.66■■□□□ 1.7
MRPL55-220ENST00000411464 NCOA3Q9Y6Q9 1424 aa25.64■■□□□ 1.7
MRPL55-220ENST00000411464 TMEM131LA2VDJ0 1609 aa25.64■■□□□ 1.7
MRPL55-220ENST00000411464 JCADQ9P266 1359 aa25.63■■□□□ 1.69
MRPL55-220ENST00000411464 NUP155O75694 1391 aa25.62■■□□□ 1.69
MRPL55-220ENST00000411464 ITGAEP38570 1179 aa25.62■■□□□ 1.69
MRPL55-220ENST00000411464 ATF3P18847 181 aa25.61■■□□□ 1.69
MRPL55-220ENST00000411464 CADPS2Q86UW7 1296 aa25.61■■□□□ 1.69
MRPL55-220ENST00000411464 C19orf44Q9H6X5 657 aa25.61■■□□□ 1.69
MRPL55-220ENST00000411464 PIK3R4Q99570 1358 aa25.59■■□□□ 1.69
MRPL55-220ENST00000411464 UNC13BO14795 1591 aa25.59■■□□□ 1.69
MRPL55-220ENST00000411464 GCC2Q8IWJ2 1684 aa25.58■■□□□ 1.69
MRPL55-220ENST00000411464 ADAMTS13Q76LX8 1427 aa25.58■■□□□ 1.69
MRPL55-220ENST00000411464 AMOTL2Q9Y2J4 779 aa25.56■■□□□ 1.68
MRPL55-220ENST00000411464 CHD2O14647 1828 aaKnown RBP25.56■■□□□ 1.68
MRPL55-220ENST00000411464 MYO5BQ9ULV0 1848 aa25.53■■□□□ 1.68
MRPL55-220ENST00000411464 PHLPP1O60346 1717 aa25.53■■□□□ 1.68
MRPL55-220ENST00000411464 E9PCH4 1651 aa25.52■■□□□ 1.68
MRPL55-220ENST00000411464 MEX3CQ5U5Q3 659 aaKnown RBP25.52■■□□□ 1.68
MRPL55-220ENST00000411464 SPATA31A6Q5VVP1 1343 aa25.52■■□□□ 1.68
MRPL55-220ENST00000411464 DIP2AQ14689 1571 aa25.52■■□□□ 1.68
MRPL55-220ENST00000411464 ZNF326Q5BKZ1 582 aaKnown RBP25.5■■□□□ 1.67
MRPL55-220ENST00000411464 IQGAP3Q86VI3 1631 aa25.5■■□□□ 1.67
MRPL55-220ENST00000411464 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
MRPL55-220ENST00000411464 TRPM2O94759 1503 aa25.47■■□□□ 1.67
MRPL55-220ENST00000411464 PTPRUQ92729 1446 aa25.46■■□□□ 1.67
MRPL55-220ENST00000411464 ZNF772Q68DY9 489 aaPredicted RBP25.45■■□□□ 1.66
MRPL55-220ENST00000411464 BRINP3Q76B58 766 aa25.45■■□□□ 1.66
MRPL55-220ENST00000411464 COL16A1Q07092 1604 aaPredicted RBP25.45■■□□□ 1.66
MRPL55-220ENST00000411464 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.42■■□□□ 1.66
MRPL55-220ENST00000411464 LRP6O75581 1613 aa25.4■■□□□ 1.66
MRPL55-220ENST00000411464 DCCP43146 1447 aa25.39■■□□□ 1.66
MRPL55-220ENST00000411464 AHDC1Q5TGY3 1603 aaPredicted RBP25.39■■□□□ 1.66
MRPL55-220ENST00000411464 NUTM2BA6NNL0 878 aaPredicted RBP25.39■■□□□ 1.66
MRPL55-220ENST00000411464 NUTM2EB1AL46 878 aaPredicted RBP25.39■■□□□ 1.66
MRPL55-220ENST00000411464 NUTM2AQ8IVF1 878 aaPredicted RBP25.39■■□□□ 1.66
MRPL55-220ENST00000411464 METP08581 1390 aa25.38■■□□□ 1.65
MRPL55-220ENST00000411464 TRIM52Q96A61 297 aa25.35■■□□□ 1.65
MRPL55-220ENST00000411464 SETBP1Q9Y6X0 1596 aa25.35■■□□□ 1.65
MRPL55-220ENST00000411464 LRRC59Q96AG4 307 aaKnown RBP25.34■■□□□ 1.65
MRPL55-220ENST00000411464 RXRBP28702 533 aa25.33■■□□□ 1.65
MRPL55-220ENST00000411464 MST1RQ04912 1400 aa25.31■■□□□ 1.64
MRPL55-220ENST00000411464 ASXL1Q8IXJ9 1541 aa25.3■■□□□ 1.64
MRPL55-220ENST00000411464 SETD5Q9C0A6 1442 aa25.29■■□□□ 1.64
MRPL55-220ENST00000411464 NRXN3Q9Y4C0 1643 aa25.29■■□□□ 1.64
MRPL55-220ENST00000411464 VGFO15240 615 aaPredicted RBP25.28■■□□□ 1.64
MRPL55-220ENST00000411464 UPF1Q92900 1129 aaKnown RBP eCLIP25.28■■□□□ 1.64
MRPL55-220ENST00000411464 SHPRHQ149N8 1683 aa25.28■■□□□ 1.64
MRPL55-220ENST00000411464 XRN1Q8IZH2 1706 aaKnown RBP25.28■■□□□ 1.64
MRPL55-220ENST00000411464 SPHKAPQ2M3C7 1700 aa25.27■■□□□ 1.64
MRPL55-220ENST00000411464 AFF2P51816 1311 aa25.27■■□□□ 1.64
MRPL55-220ENST00000411464 ADGRL3Q9HAR2 1447 aa25.27■■□□□ 1.64
MRPL55-220ENST00000411464 DDX17Q92841 729 aaKnown RBP25.26■■□□□ 1.63
MRPL55-220ENST00000411464 SETD1AO15047 1707 aaKnown RBP25.25■■□□□ 1.63
MRPL55-220ENST00000411464 NAIPQ13075 1403 aa25.23■■□□□ 1.63
MRPL55-220ENST00000411464 C8orf37Q96NL8 207 aa25.23■■□□□ 1.63
MRPL55-220ENST00000411464 NEXMIFQ5QGS0 1516 aa25.22■■□□□ 1.63
MRPL55-220ENST00000411464 RRBP1Q9P2E9 1410 aaKnown RBP25.21■■□□□ 1.63
MRPL55-220ENST00000411464 CLTCL1P53675 1640 aa25.21■■□□□ 1.63
MRPL55-220ENST00000411464 PNPLA6Q8IY17 1366 aa25.19■■□□□ 1.62
MRPL55-220ENST00000411464 RPGRIP1LQ68CZ1 1315 aa25.19■■□□□ 1.62
MRPL55-220ENST00000411464 SLC4A1APQ9BWU0 796 aaKnown RBP25.19■■□□□ 1.62
MRPL55-220ENST00000411464 QTRT2Q9H974 415 aaKnown RBP25.19■■□□□ 1.62
MRPL55-220ENST00000411464 C1orf167Q5SNV9 1468 aa25.18■■□□□ 1.62
MRPL55-220ENST00000411464 CDK12Q9NYV4 1490 aaPredicted RBP25.17■■□□□ 1.62
MRPL55-220ENST00000411464 NGLY1Q96IV0 654 aa25.16■■□□□ 1.62
MRPL55-220ENST00000411464 ROBO2Q9HCK4 1378 aa25.16■■□□□ 1.62
MRPL55-220ENST00000411464 PTCH1Q13635 1447 aa25.15■■□□□ 1.62
MRPL55-220ENST00000411464 ADAMTS2O95450 1211 aa25.15■■□□□ 1.62
MRPL55-220ENST00000411464 RBM6P78332 1123 aaKnown RBP25.15■■□□□ 1.62
MRPL55-220ENST00000411464 ORAI2Q96SN7 254 aa25.15■■□□□ 1.62
MRPL55-220ENST00000411464 NHSL1Q5SYE7 1610 aa25.14■■□□□ 1.61
MRPL55-220ENST00000411464 SOS2Q07890 1332 aaPredicted RBP25.12■■□□□ 1.61
MRPL55-220ENST00000411464 HFM1A2PYH4 1435 aa25.11■■□□□ 1.61
MRPL55-220ENST00000411464 NALCNQ8IZF0 1738 aa25.09■■□□□ 1.61
MRPL55-220ENST00000411464 KIF1BO60333 1816 aa25.09■■□□□ 1.61
MRPL55-220ENST00000411464 USP21Q9UK80 565 aa25.06■■□□□ 1.6
MRPL55-220ENST00000411464 PRAG1Q86YV5 1406 aa25.05■■□□□ 1.6
MRPL55-220ENST00000411464 FOXD1Q16676 465 aa25.05■■□□□ 1.6
MRPL55-220ENST00000411464 ESCO1Q5FWF5 840 aa25.05■■□□□ 1.6
MRPL55-220ENST00000411464 RGS12O14924 1447 aa25.04■■□□□ 1.6
MRPL55-220ENST00000411464 RGL3Q3MIN7 710 aa25.02■■□□□ 1.6
MRPL55-220ENST00000411464 TRPC5Q9UL62 973 aaPredicted RBP25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms