RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 ANKLE1Q8NAG6 615 aa6.82□□□□□ -1.32
RNU6-1140P-201ENST00000410517 GMPR2Q9P2T1 348 aaKnown RBP6.81□□□□□ -1.32
RNU6-1140P-201ENST00000410517 SWT1Q5T5J6 900 aaKnown RBP6.8□□□□□ -1.32
RNU6-1140P-201ENST00000410517 SLF2Q8IX21 1173 aa6.8□□□□□ -1.32
RNU6-1140P-201ENST00000410517 PCDHB3Q9Y5E6 796 aa6.8□□□□□ -1.32
RNU6-1140P-201ENST00000410517 TLL1O43897 1013 aa6.79□□□□□ -1.32
RNU6-1140P-201ENST00000410517 CERKQ8TCT0 537 aa6.79□□□□□ -1.32
RNU6-1140P-201ENST00000410517 GTPBP6O43824 516 aaPredicted RBP6.78□□□□□ -1.32
RNU6-1140P-201ENST00000410517 S1PR4O95977 384 aa6.78□□□□□ -1.32
RNU6-1140P-201ENST00000410517 FOXC1Q12948 553 aa6.78□□□□□ -1.32
RNU6-1140P-201ENST00000410517 BLOC1S3Q6QNY0 202 aa6.78□□□□□ -1.32
RNU6-1140P-201ENST00000410517 CAMK2BQ13554 666 aa6.77□□□□□ -1.33
RNU6-1140P-201ENST00000410517 CRIPAKQ8N1N5 446 aa6.77□□□□□ -1.33
RNU6-1140P-201ENST00000410517 AXIN1O15169 862 aa6.76□□□□□ -1.33
RNU6-1140P-201ENST00000410517 SLC4A3P48751 1232 aa6.76□□□□□ -1.33
RNU6-1140P-201ENST00000410517 CADPS2Q86UW7 1296 aa6.76□□□□□ -1.33
RNU6-1140P-201ENST00000410517 PRR14Q9BWN1 585 aa6.76□□□□□ -1.33
RNU6-1140P-201ENST00000410517 FAM181BA6NEQ2 426 aa6.74□□□□□ -1.33
RNU6-1140P-201ENST00000410517 LCE2CQ5TA81 110 aa6.74□□□□□ -1.33
RNU6-1140P-201ENST00000410517 PKD2L1Q9P0L9 805 aa6.74□□□□□ -1.33
RNU6-1140P-201ENST00000410517 TERTO14746 1132 aaKnown RBP6.72□□□□□ -1.33
RNU6-1140P-201ENST00000410517 AVPP01185 164 aa6.72□□□□□ -1.33
RNU6-1140P-201ENST00000410517 SUZ12Q15022 739 aaKnown RBP6.72□□□□□ -1.33
RNU6-1140P-201ENST00000410517 PLA2G2CQ5R387 149 aa6.72□□□□□ -1.33
RNU6-1140P-201ENST00000410517 PRIM1P49642 420 aaKnown RBP6.71□□□□□ -1.34
RNU6-1140P-201ENST00000410517 LMOD2Q6P5Q4 547 aa6.71□□□□□ -1.34
RNU6-1140P-201ENST00000410517 CTC1Q2NKJ3 1217 aa6.7□□□□□ -1.34
RNU6-1140P-201ENST00000410517 CYP4X1Q8N118 509 aa6.7□□□□□ -1.34
RNU6-1140P-201ENST00000410517 GRXCR2A6NFK2 248 aa6.69□□□□□ -1.34
RNU6-1140P-201ENST00000410517 SNRPBP14678 240 aaKnown RBP6.69□□□□□ -1.34
RNU6-1140P-201ENST00000410517 PDIA6Q15084 440 aa6.69□□□□□ -1.34
RNU6-1140P-201ENST00000410517 CDHR5Q9HBB8 845 aa6.69□□□□□ -1.34
RNU6-1140P-201ENST00000410517 RBM27Q9P2N5 1060 aaKnown RBP6.69□□□□□ -1.34
RNU6-1140P-201ENST00000410517 ADH1BP00325 375 aa6.68□□□□□ -1.34
RNU6-1140P-201ENST00000410517 SLC6A16Q9GZN6 736 aa6.68□□□□□ -1.34
RNU6-1140P-201ENST00000410517 TOR4AQ9NXH8 423 aa6.68□□□□□ -1.34
RNU6-1140P-201ENST00000410517 SPDYE16A6NNV3 312 aaPredicted RBP6.67□□□□□ -1.34
RNU6-1140P-201ENST00000410517 SMCPP49901 116 aaPredicted RBP6.66□□□□□ -1.34
RNU6-1140P-201ENST00000410517 PADI6Q6TGC4 694 aa6.66□□□□□ -1.34
RNU6-1140P-201ENST00000410517 TTC13Q8NBP0 860 aa6.65□□□□□ -1.34
RNU6-1140P-201ENST00000410517 ACTN4O43707 911 aaKnown RBP6.64□□□□□ -1.35
RNU6-1140P-201ENST00000410517 KMT5BQ4FZB7 885 aa6.64□□□□□ -1.35
RNU6-1140P-201ENST00000410517 ZSCAN1Q8NBB4 408 aa6.64□□□□□ -1.35
RNU6-1140P-201ENST00000410517 ATP13A2Q9NQ11 1180 aa6.64□□□□□ -1.35
RNU6-1140P-201ENST00000410517 TTC24A2A3L6 582 aaPredicted RBP6.63□□□□□ -1.35
RNU6-1140P-201ENST00000410517 NR1I2O75469 434 aa6.63□□□□□ -1.35
RNU6-1140P-201ENST00000410517 EYA1Q99502 592 aa6.63□□□□□ -1.35
RNU6-1140P-201ENST00000410517 SENP2Q9HC62 589 aa6.63□□□□□ -1.35
RNU6-1140P-201ENST00000410517 CD2BP2O95400 341 aaKnown RBP6.62□□□□□ -1.35
RNU6-1140P-201ENST00000410517 RPIAP49247 311 aa6.62□□□□□ -1.35
RNU6-1140P-201ENST00000410517 AMER1Q5JTC6 1135 aaPredicted RBP6.62□□□□□ -1.35
RNU6-1140P-201ENST00000410517 SLC16A10Q8TF71 515 aa6.62□□□□□ -1.35
RNU6-1140P-201ENST00000410517 TRIM47Q96LD4 638 aa6.62□□□□□ -1.35
RNU6-1140P-201ENST00000410517 CFHP08603 1231 aa6.6□□□□□ -1.35
RNU6-1140P-201ENST00000410517 OSBPP22059 807 aa6.6□□□□□ -1.35
RNU6-1140P-201ENST00000410517 GMPRP36959 345 aa6.6□□□□□ -1.35
RNU6-1140P-201ENST00000410517 LORP23490 312 aaPredicted RBP6.59□□□□□ -1.35
RNU6-1140P-201ENST00000410517 NPDC1Q9NQX5 325 aaPredicted RBP6.59□□□□□ -1.35
RNU6-1140P-201ENST00000410517 SCUBE3Q8IX30 993 aa6.58□□□□□ -1.36
RNU6-1140P-201ENST00000410517 SPSB2Q99619 263 aa6.58□□□□□ -1.36
RNU6-1140P-201ENST00000410517 DNAJB2P25686 324 aa6.57□□□□□ -1.36
RNU6-1140P-201ENST00000410517 KIFC2Q96AC6 838 aa6.57□□□□□ -1.36
RNU6-1140P-201ENST00000410517 SMPD1P17405 629 aa6.56□□□□□ -1.36
RNU6-1140P-201ENST00000410517 FCF1Q9Y324 198 aaKnown RBP6.56□□□□□ -1.36
RNU6-1140P-201ENST00000410517 IRF7Q92985 503 aa6.55□□□□□ -1.36
RNU6-1140P-201ENST00000410517 TMEM134Q9H6X4 195 aa6.55□□□□□ -1.36
RNU6-1140P-201ENST00000410517 NXF1Q9UBU9 619 aaKnown RBP6.55□□□□□ -1.36
RNU6-1140P-201ENST00000410517 SNIP1Q8TAD8 396 aaKnown RBP6.54□□□□□ -1.36
RNU6-1140P-201ENST00000410517 PUS10Q3MIT2 529 aaKnown RBP6.53□□□□□ -1.36
RNU6-1140P-201ENST00000410517 KCTD17Q8N5Z5 321 aa6.53□□□□□ -1.36
RNU6-1140P-201ENST00000410517 VEGFBP49765 207 aa6.52□□□□□ -1.37
RNU6-1140P-201ENST00000410517 RBM46Q8TBY0 533 aaKnown RBP6.52□□□□□ -1.37
RNU6-1140P-201ENST00000410517 J3QL48 77 aa6.51□□□□□ -1.37
RNU6-1140P-201ENST00000410517 ZBTB24O43167 697 aaPredicted RBP6.51□□□□□ -1.37
RNU6-1140P-201ENST00000410517 SLC10A3P09131 477 aa6.51□□□□□ -1.37
RNU6-1140P-201ENST00000410517 HPS1Q92902 700 aa6.51□□□□□ -1.37
RNU6-1140P-201ENST00000410517 WNT7AO00755 349 aa6.5□□□□□ -1.37
RNU6-1140P-201ENST00000410517 RCCD1A6NED2 376 aa6.49□□□□□ -1.37
RNU6-1140P-201ENST00000410517 E2F4Q16254 413 aa6.49□□□□□ -1.37
RNU6-1140P-201ENST00000410517 NPAS3Q8IXF0 933 aa6.48□□□□□ -1.37
RNU6-1140P-201ENST00000410517 MRGPRX2Q96LB1 330 aa6.48□□□□□ -1.37
RNU6-1140P-201ENST00000410517 DCAF8L2P0C7V8 631 aa6.47□□□□□ -1.37
RNU6-1140P-201ENST00000410517 ADGRG1Q9Y653 693 aa6.47□□□□□ -1.37
RNU6-1140P-201ENST00000410517 ERBB4Q15303 1308 aa6.47□□□□□ -1.37
RNU6-1140P-201ENST00000410517 H3BM21 787 aa6.46□□□□□ -1.38
RNU6-1140P-201ENST00000410517 FAM161AQ3B820 660 aa6.46□□□□□ -1.38
RNU6-1140P-201ENST00000410517 FAM160A2Q8N612 972 aaPredicted RBP6.46□□□□□ -1.38
RNU6-1140P-201ENST00000410517 ARIH1Q9Y4X5 557 aaPredicted RBP6.46□□□□□ -1.38
RNU6-1140P-201ENST00000410517 KCNMA1Q12791 1236 aa6.45□□□□□ -1.38
RNU6-1140P-201ENST00000410517 RSPH4AQ5TD94 716 aa6.44□□□□□ -1.38
RNU6-1140P-201ENST00000410517 PRDM9Q9NQV7 894 aa6.44□□□□□ -1.38
RNU6-1140P-201ENST00000410517 TRIM32Q13049 653 aa6.43□□□□□ -1.38
RNU6-1140P-201ENST00000410517 TMEM151AQ8N4L1 468 aa6.43□□□□□ -1.38
RNU6-1140P-201ENST00000410517 THAP11Q96EK4 314 aa6.43□□□□□ -1.38
RNU6-1140P-201ENST00000410517 FMNL1O95466 1100 aaPredicted RBP6.42□□□□□ -1.38
RNU6-1140P-201ENST00000410517 GSK3AP49840 483 aa6.42□□□□□ -1.38
RNU6-1140P-201ENST00000410517 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.41□□□□□ -1.38
RNU6-1140P-201ENST00000410517 GDF11O95390 407 aa6.41□□□□□ -1.38
RNU6-1140P-201ENST00000410517 BMP1P13497 986 aa6.41□□□□□ -1.38
RNU6-1140P-201ENST00000410517 MORN1Q5T089 497 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms