RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 TMEM134Q9H6X4 195 aa5.4□□□□□ -1.54
RNU2-54P-201ENST00000410299 OATP04181 439 aa5.39□□□□□ -1.55
RNU2-54P-201ENST00000410299 SLC4A3P48751 1232 aa5.39□□□□□ -1.55
RNU2-54P-201ENST00000410299 METTL3Q86U44 580 aaKnown RBP5.39□□□□□ -1.55
RNU2-54P-201ENST00000410299 MTRQ99707 1265 aa5.39□□□□□ -1.55
RNU2-54P-201ENST00000410299 NLRP7Q8WX94 980 aa5.38□□□□□ -1.55
RNU2-54P-201ENST00000410299 ZNF516Q92618 1163 aa5.38□□□□□ -1.55
RNU2-54P-201ENST00000410299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP5.37□□□□□ -1.55
RNU2-54P-201ENST00000410299 TULP1O00294 542 aaPredicted RBP5.37□□□□□ -1.55
RNU2-54P-201ENST00000410299 PHOX2BQ99453 314 aa5.37□□□□□ -1.55
RNU2-54P-201ENST00000410299 SLC10A3P09131 477 aa5.36□□□□□ -1.55
RNU2-54P-201ENST00000410299 COPS2P61201 443 aa5.36□□□□□ -1.55
RNU2-54P-201ENST00000410299 NECTIN2Q92692 538 aa5.36□□□□□ -1.55
RNU2-54P-201ENST00000410299 IL21Q9HBE4 155 aa5.36□□□□□ -1.55
RNU2-54P-201ENST00000410299 CFHP08603 1231 aa5.35□□□□□ -1.55
RNU2-54P-201ENST00000410299 LAPTM4AQ15012 233 aa5.35□□□□□ -1.55
RNU2-54P-201ENST00000410299 NKX2-3Q8TAU0 364 aa5.35□□□□□ -1.55
RNU2-54P-201ENST00000410299 BLOC1S3Q6QNY0 202 aa5.34□□□□□ -1.55
RNU2-54P-201ENST00000410299 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.34□□□□□ -1.55
RNU2-54P-201ENST00000410299 PCDHB3Q9Y5E6 796 aa5.34□□□□□ -1.55
RNU2-54P-201ENST00000410299 PRR14Q9BWN1 585 aa5.33□□□□□ -1.56
RNU2-54P-201ENST00000410299 IRF6O14896 467 aa5.32□□□□□ -1.56
RNU2-54P-201ENST00000410299 ACTN4O43707 911 aaKnown RBP5.32□□□□□ -1.56
RNU2-54P-201ENST00000410299 ZPR1O75312 459 aa5.32□□□□□ -1.56
RNU2-54P-201ENST00000410299 MAP2K5Q13163 448 aa5.32□□□□□ -1.56
RNU2-54P-201ENST00000410299 KMT5BQ4FZB7 885 aa5.32□□□□□ -1.56
RNU2-54P-201ENST00000410299 LMOD2Q6P5Q4 547 aa5.32□□□□□ -1.56
RNU2-54P-201ENST00000410299 DAXXQ9UER7 740 aaPredicted RBP5.32□□□□□ -1.56
RNU2-54P-201ENST00000410299 DDX11L8A8MPP1 907 aa5.31□□□□□ -1.56
RNU2-54P-201ENST00000410299 PPP1R18Q6NYC8 613 aa5.31□□□□□ -1.56
RNU2-54P-201ENST00000410299 TRAF7Q6Q0C0 670 aa5.31□□□□□ -1.56
RNU2-54P-201ENST00000410299 RDH13Q8NBN7 331 aa5.31□□□□□ -1.56
RNU2-54P-201ENST00000410299 MINK1Q8N4C8 1332 aaPredicted RBP5.3□□□□□ -1.56
RNU2-54P-201ENST00000410299 TLL1O43897 1013 aa5.3□□□□□ -1.56
RNU2-54P-201ENST00000410299 PUS10Q3MIT2 529 aaKnown RBP5.3□□□□□ -1.56
RNU2-54P-201ENST00000410299 RSPH4AQ5TD94 716 aa5.3□□□□□ -1.56
RNU2-54P-201ENST00000410299 GFRA3O60609 400 aa5.29□□□□□ -1.56
RNU2-54P-201ENST00000410299 CCDC102AQ96A19 550 aa5.29□□□□□ -1.56
RNU2-54P-201ENST00000410299 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.29□□□□□ -1.56
RNU2-54P-201ENST00000410299 MDM2Q00987 491 aaPredicted RBP5.28□□□□□ -1.56
RNU2-54P-201ENST00000410299 FUT2Q10981 343 aa5.28□□□□□ -1.56
RNU2-54P-201ENST00000410299 SULF1Q8IWU6 871 aa5.28□□□□□ -1.56
RNU2-54P-201ENST00000410299 NR1I2O75469 434 aa5.27□□□□□ -1.57
RNU2-54P-201ENST00000410299 GCGRP47871 477 aa5.27□□□□□ -1.57
RNU2-54P-201ENST00000410299 SCUBE3Q8IX30 993 aa5.27□□□□□ -1.57
RNU2-54P-201ENST00000410299 PRKD2Q9BZL6 878 aa5.27□□□□□ -1.57
RNU2-54P-201ENST00000410299 GGCXP38435 758 aa5.26□□□□□ -1.57
RNU2-54P-201ENST00000410299 KRI1Q8N9T8 703 aaKnown RBP5.26□□□□□ -1.57
RNU2-54P-201ENST00000410299 ZC3H15Q8WU90 426 aaKnown RBP5.26□□□□□ -1.57
RNU2-54P-201ENST00000410299 RNF223E7ERA6 249 aa5.25□□□□□ -1.57
RNU2-54P-201ENST00000410299 ZMYND10O75800 440 aa5.25□□□□□ -1.57
RNU2-54P-201ENST00000410299 S1PR4O95977 384 aa5.25□□□□□ -1.57
RNU2-54P-201ENST00000410299 ADH1BP00325 375 aa5.25□□□□□ -1.57
RNU2-54P-201ENST00000410299 MORN1Q5T089 497 aa5.25□□□□□ -1.57
RNU2-54P-201ENST00000410299 BARGINQ6ZT62 677 aa5.25□□□□□ -1.57
RNU2-54P-201ENST00000410299 PPEF1O14829 653 aaPredicted RBP5.24□□□□□ -1.57
RNU2-54P-201ENST00000410299 CD46P15529 392 aa5.24□□□□□ -1.57
RNU2-54P-201ENST00000410299 ATP6V1AP38606 617 aa5.24□□□□□ -1.57
RNU2-54P-201ENST00000410299 ZNF787Q6DD87 383 aa5.24□□□□□ -1.57
RNU2-54P-201ENST00000410299 TMUB1Q9BVT8 246 aa5.24□□□□□ -1.57
RNU2-54P-201ENST00000410299 SLC27A5Q9Y2P5 690 aa5.24□□□□□ -1.57
RNU2-54P-201ENST00000410299 SPSB2Q99619 263 aa5.23□□□□□ -1.57
RNU2-54P-201ENST00000410299 REPIN1Q9BWE0 567 aaKnown RBP5.23□□□□□ -1.57
RNU2-54P-201ENST00000410299 NRG2O14511 850 aaPredicted RBP5.22□□□□□ -1.57
RNU2-54P-201ENST00000410299 CLCN1P35523 988 aa5.22□□□□□ -1.57
RNU2-54P-201ENST00000410299 EMID1Q96A84 441 aaPredicted RBP5.22□□□□□ -1.57
RNU2-54P-201ENST00000410299 THAP11Q96EK4 314 aa5.22□□□□□ -1.57
RNU2-54P-201ENST00000410299 SLC6A16Q9GZN6 736 aa5.22□□□□□ -1.57
RNU2-54P-201ENST00000410299 GPCPD1Q9NPB8 672 aa5.22□□□□□ -1.57
RNU2-54P-201ENST00000410299 FAM217BQ9NTX9 383 aaPredicted RBP5.22□□□□□ -1.57
RNU2-54P-201ENST00000410299 V9GY48 417 aaPredicted RBP5.22□□□□□ -1.57
RNU2-54P-201ENST00000410299 LCE2BO14633 110 aa5.21□□□□□ -1.58
RNU2-54P-201ENST00000410299 KDM4AO75164 1064 aa5.21□□□□□ -1.58
RNU2-54P-201ENST00000410299 FAM160A2Q8N612 972 aaPredicted RBP5.21□□□□□ -1.58
RNU2-54P-201ENST00000410299 ANKLE1Q8NAG6 615 aa5.21□□□□□ -1.58
RNU2-54P-201ENST00000410299 HLA-CQ95604 372 aa5.21□□□□□ -1.58
RNU2-54P-201ENST00000410299 FMNL1O95466 1100 aaPredicted RBP5.2□□□□□ -1.58
RNU2-54P-201ENST00000410299 SLC19A1P41440 591 aa5.2□□□□□ -1.58
RNU2-54P-201ENST00000410299 TTLL12Q14166 644 aaPredicted RBP5.2□□□□□ -1.58
RNU2-54P-201ENST00000410299 GRIPAP1Q4V328 841 aa5.2□□□□□ -1.58
RNU2-54P-201ENST00000410299 PLA2G2CQ5R387 149 aa5.2□□□□□ -1.58
RNU2-54P-201ENST00000410299 BRICD5Q6PL45 260 aa5.2□□□□□ -1.58
RNU2-54P-201ENST00000410299 RNF19BQ6ZMZ0 732 aa5.2□□□□□ -1.58
RNU2-54P-201ENST00000410299 SLC24A1O60721 1099 aa5.19□□□□□ -1.58
RNU2-54P-201ENST00000410299 SSTR3P32745 418 aaPredicted RBP5.19□□□□□ -1.58
RNU2-54P-201ENST00000410299 LIAT1Q6ZQX7 453 aa5.19□□□□□ -1.58
RNU2-54P-201ENST00000410299 PRDM9Q9NQV7 894 aa5.19□□□□□ -1.58
RNU2-54P-201ENST00000410299 HOXA2O43364 376 aa5.18□□□□□ -1.58
RNU2-54P-201ENST00000410299 GUCA2AQ02747 115 aa5.18□□□□□ -1.58
RNU2-54P-201ENST00000410299 AMHR2Q16671 573 aa5.18□□□□□ -1.58
RNU2-54P-201ENST00000410299 ZNF775Q96BV0 537 aaPredicted RBP5.18□□□□□ -1.58
RNU2-54P-201ENST00000410299 SALL2Q9Y467 1007 aaPredicted RBP5.18□□□□□ -1.58
RNU2-54P-201ENST00000410299 TRIM66O15016 1216 aa5.17□□□□□ -1.58
RNU2-54P-201ENST00000410299 USP46P62068 366 aa5.17□□□□□ -1.58
RNU2-54P-201ENST00000410299 Q3C1V9 767 aa5.17□□□□□ -1.58
RNU2-54P-201ENST00000410299 GIGYF2Q6Y7W6 1299 aaKnown RBP5.17□□□□□ -1.58
RNU2-54P-201ENST00000410299 NUTM1Q86Y26 1132 aa5.17□□□□□ -1.58
RNU2-54P-201ENST00000410299 PDZRN3Q9UPQ7 1066 aa5.17□□□□□ -1.58
RNU2-54P-201ENST00000410299 FCF1Q9Y324 198 aaKnown RBP5.17□□□□□ -1.58
RNU2-54P-201ENST00000410299 SPRYD7Q5W111 196 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms