RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 DMRTA1Q5VZB9 504 aa10.14□□□□□ -0.79
LSM5-206ENST00000409987 SULF1Q8IWU6 871 aa10.14□□□□□ -0.79
LSM5-206ENST00000409987 AXIN2Q9Y2T1 843 aa10.14□□□□□ -0.79
LSM5-206ENST00000409987 SUPT5HO00267 1087 aaKnown RBP10.13□□□□□ -0.79
LSM5-206ENST00000409987 EMP3P54852 163 aa10.13□□□□□ -0.79
LSM5-206ENST00000409987 SPIRE2Q8WWL2 714 aa10.13□□□□□ -0.79
LSM5-206ENST00000409987 MARVELD3Q96A59 401 aa10.13□□□□□ -0.79
LSM5-206ENST00000409987 ZMYND15Q9H091 742 aa10.13□□□□□ -0.79
LSM5-206ENST00000409987 CLK2P49760 499 aaKnown RBP10.12□□□□□ -0.79
LSM5-206ENST00000409987 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.12□□□□□ -0.79
LSM5-206ENST00000409987 SLC4A5Q9BY07 1137 aa10.12□□□□□ -0.79
LSM5-206ENST00000409987 FLIIQ13045 1269 aa10.11□□□□□ -0.79
LSM5-206ENST00000409987 DIXDC1Q155Q3 683 aa10.11□□□□□ -0.79
LSM5-206ENST00000409987 RABGEF1Q9UJ41 708 aa10.11□□□□□ -0.79
LSM5-206ENST00000409987 PBX2P40425 430 aa10.1□□□□□ -0.79
LSM5-206ENST00000409987 SEPT9Q9UHD8 586 aaPredicted RBP10.1□□□□□ -0.79
LSM5-206ENST00000409987 ZNF687Q8N1G0 1237 aa10.09□□□□□ -0.79
LSM5-206ENST00000409987 LIMD1Q9UGP4 676 aa10.09□□□□□ -0.79
LSM5-206ENST00000409987 ATP1B4Q9UN42 357 aaPredicted RBP10.09□□□□□ -0.79
LSM5-206ENST00000409987 FAM205CA6NFA0 338 aa10.08□□□□□ -0.8
LSM5-206ENST00000409987 FBXO31Q5XUX0 539 aaPredicted RBP10.08□□□□□ -0.8
LSM5-206ENST00000409987 MMRN1Q13201 1228 aa10.07□□□□□ -0.8
LSM5-206ENST00000409987 SWT1Q5T5J6 900 aaKnown RBP10.07□□□□□ -0.8
LSM5-206ENST00000409987 RIC3Q7Z5B4 369 aa10.07□□□□□ -0.8
LSM5-206ENST00000409987 NUTM1Q86Y26 1132 aa10.07□□□□□ -0.8
LSM5-206ENST00000409987 RDH13Q8NBN7 331 aa10.07□□□□□ -0.8
LSM5-206ENST00000409987 VPS9D1Q9Y2B5 631 aa10.07□□□□□ -0.8
LSM5-206ENST00000409987 POTEB3A0JP26 581 aa10.06□□□□□ -0.8
LSM5-206ENST00000409987 MOXD2PA6NHM9 499 aa10.06□□□□□ -0.8
LSM5-206ENST00000409987 SPTLC1O15269 473 aa10.06□□□□□ -0.8
LSM5-206ENST00000409987 MCM6Q14566 821 aa10.06□□□□□ -0.8
LSM5-206ENST00000409987 POTEBQ6S5H4 581 aa10.06□□□□□ -0.8
LSM5-206ENST00000409987 RSBN1LQ6PCB5 846 aaPredicted RBP10.05□□□□□ -0.8
LSM5-206ENST00000409987 SLC10A3P09131 477 aa10.04□□□□□ -0.8
LSM5-206ENST00000409987 FAM98CQ17RN3 349 aaKnown RBP10.04□□□□□ -0.8
LSM5-206ENST00000409987 NDUFV2P19404 249 aa10.03□□□□□ -0.8
LSM5-206ENST00000409987 RFC5P40937 340 aa10.03□□□□□ -0.8
LSM5-206ENST00000409987 GCGRP47871 477 aa10.03□□□□□ -0.8
LSM5-206ENST00000409987 TUSC1Q2TAM9 212 aa10.03□□□□□ -0.8
LSM5-206ENST00000409987 HS3ST6Q96QI5 342 aa10.03□□□□□ -0.8
LSM5-206ENST00000409987 KDM4AO75164 1064 aa10.02□□□□□ -0.81
LSM5-206ENST00000409987 PPP2R2DQ66LE6 453 aa10.02□□□□□ -0.81
LSM5-206ENST00000409987 BHMG1C9JSJ3 638 aaPredicted RBP10.01□□□□□ -0.81
LSM5-206ENST00000409987 GJA5P36382 358 aa10.01□□□□□ -0.81
LSM5-206ENST00000409987 CSPP1Q1MSJ5 1256 aa10.01□□□□□ -0.81
LSM5-206ENST00000409987 SPNS2Q8IVW8 549 aa10.01□□□□□ -0.81
LSM5-206ENST00000409987 QPCTQ16769 361 aa10□□□□□ -0.81
LSM5-206ENST00000409987 RSPH4AQ5TD94 716 aa10□□□□□ -0.81
LSM5-206ENST00000409987 SAMD7Q7Z3H4 446 aa10□□□□□ -0.81
LSM5-206ENST00000409987 PCDHB15Q9Y5E8 787 aa10□□□□□ -0.81
LSM5-206ENST00000409987 HOXA2O43364 376 aa9.99□□□□□ -0.81
LSM5-206ENST00000409987 LAPTM4BQ86VI4 370 aa9.99□□□□□ -0.81
LSM5-206ENST00000409987 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
LSM5-206ENST00000409987 NBPF3Q9H094 633 aa9.99□□□□□ -0.81
LSM5-206ENST00000409987 TK2O00142 265 aa9.98□□□□□ -0.81
LSM5-206ENST00000409987 UBTFP17480 764 aaKnown RBP9.98□□□□□ -0.81
LSM5-206ENST00000409987 USP46P62068 366 aa9.98□□□□□ -0.81
LSM5-206ENST00000409987 A6NJR5 290 aa9.97□□□□□ -0.81
LSM5-206ENST00000409987 LILRB3O75022 631 aa9.97□□□□□ -0.81
LSM5-206ENST00000409987 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
LSM5-206ENST00000409987 SLF2Q8IX21 1173 aa9.97□□□□□ -0.81
LSM5-206ENST00000409987 BANK1Q8NDB2 785 aa9.97□□□□□ -0.81
LSM5-206ENST00000409987 HLA-CQ95604 372 aa9.97□□□□□ -0.81
LSM5-206ENST00000409987 SPDYE5A6NIY4 337 aa9.96□□□□□ -0.82
LSM5-206ENST00000409987 LSM11P83369 360 aaKnown RBP eCLIP9.96□□□□□ -0.82
LSM5-206ENST00000409987 ZFRQ96KR1 1074 aaKnown RBP9.96□□□□□ -0.82
LSM5-206ENST00000409987 SNRKQ9NRH2 765 aa9.96□□□□□ -0.82
LSM5-206ENST00000409987 FDX1P10109 184 aa9.95□□□□□ -0.82
LSM5-206ENST00000409987 GUCA2AQ02747 115 aa9.95□□□□□ -0.82
LSM5-206ENST00000409987 TMEM259Q4ZIN3 620 aa9.95□□□□□ -0.82
LSM5-206ENST00000409987 RTL5Q5HYW3 569 aaPredicted RBP9.95□□□□□ -0.82
LSM5-206ENST00000409987 ADGRD1Q6QNK2 874 aa9.95□□□□□ -0.82
LSM5-206ENST00000409987 CABLES1Q8TDN4 633 aa9.95□□□□□ -0.82
LSM5-206ENST00000409987 PCDHGC3Q9UN70 934 aa9.95□□□□□ -0.82
LSM5-206ENST00000409987 POM121Q96HA1 1249 aa9.94□□□□□ -0.82
LSM5-206ENST00000409987 CFHP08603 1231 aa9.93□□□□□ -0.82
LSM5-206ENST00000409987 SLC4A3P48751 1232 aa9.93□□□□□ -0.82
LSM5-206ENST00000409987 PRPF38BQ5VTL8 546 aaKnown RBP9.93□□□□□ -0.82
LSM5-206ENST00000409987 MRPL50Q8N5N7 158 aaKnown RBP9.93□□□□□ -0.82
LSM5-206ENST00000409987 ARXQ96QS3 562 aa9.93□□□□□ -0.82
LSM5-206ENST00000409987 C1orf115Q9H7X2 142 aa9.93□□□□□ -0.82
LSM5-206ENST00000409987 HRO43593 1189 aa9.92□□□□□ -0.82
LSM5-206ENST00000409987 RNF40O75150 1001 aa9.92□□□□□ -0.82
LSM5-206ENST00000409987 HRCP23327 699 aa9.92□□□□□ -0.82
LSM5-206ENST00000409987 FUT2Q10981 343 aa9.92□□□□□ -0.82
LSM5-206ENST00000409987 ZBTB3Q9H5J0 574 aa9.92□□□□□ -0.82
LSM5-206ENST00000409987 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
LSM5-206ENST00000409987 NUTM2BA6NNL0 878 aaPredicted RBP9.91□□□□□ -0.82
LSM5-206ENST00000409987 NUTM2EB1AL46 878 aaPredicted RBP9.91□□□□□ -0.82
LSM5-206ENST00000409987 TRAK2O60296 914 aa9.91□□□□□ -0.82
LSM5-206ENST00000409987 NUTM2DQ5VT03 806 aaPredicted RBP9.91□□□□□ -0.82
LSM5-206ENST00000409987 NUTM2AQ8IVF1 878 aaPredicted RBP9.91□□□□□ -0.82
LSM5-206ENST00000409987 MTMR14Q8NCE2 650 aa9.91□□□□□ -0.82
LSM5-206ENST00000409987 AP1G2O75843 785 aa9.89□□□□□ -0.83
LSM5-206ENST00000409987 LRCH3Q96II8 777 aa9.89□□□□□ -0.83
LSM5-206ENST00000409987 COG6Q9Y2V7 657 aa9.89□□□□□ -0.83
LSM5-206ENST00000409987 PROSER2Q86WR7 435 aaPredicted RBP9.88□□□□□ -0.83
LSM5-206ENST00000409987 FNBP4Q8N3X1 1017 aaPredicted RBP9.88□□□□□ -0.83
LSM5-206ENST00000409987 APBB1O00213 710 aa9.87□□□□□ -0.83
LSM5-206ENST00000409987 RAD21O60216 631 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms