RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 HSPA1LP34931 641 aa34.3■■■■□ 3.08
KDELR3-202ENST00000409006 SENP3Q9H4L4 574 aaPredicted RBP34.28■■■■□ 3.08
KDELR3-202ENST00000409006 RIMS2Q9UQ26 1411 aa34.25■■■■□ 3.07
KDELR3-202ENST00000409006 CHGAP10645 457 aaKnown RBP34.23■■■■□ 3.07
KDELR3-202ENST00000409006 KCNA6P17658 529 aa34.21■■■■□ 3.07
KDELR3-202ENST00000409006 ILDR2Q71H61 639 aa34.21■■■■□ 3.07
KDELR3-202ENST00000409006 SPHKAPQ2M3C7 1700 aa34.21■■■■□ 3.07
KDELR3-202ENST00000409006 BCANQ96GW7 911 aa34.2■■■■□ 3.07
KDELR3-202ENST00000409006 NAIPQ13075 1403 aa34.2■■■■□ 3.06
KDELR3-202ENST00000409006 PLEKHG1Q9ULL1 1385 aa34.19■■■■□ 3.06
KDELR3-202ENST00000409006 NWD1Q149M9 1564 aa34.18■■■■□ 3.06
KDELR3-202ENST00000409006 CHD2O14647 1828 aaKnown RBP34.18■■■■□ 3.06
KDELR3-202ENST00000409006 NUTM2DQ5VT03 806 aaPredicted RBP34.16■■■■□ 3.06
KDELR3-202ENST00000409006 TMEM94Q12767 1356 aa34.15■■■■□ 3.06
KDELR3-202ENST00000409006 PPP1R15AO75807 674 aaPredicted RBP34.15■■■■□ 3.06
KDELR3-202ENST00000409006 RBM33Q96EV2 1170 aaKnown RBP34.15■■■■□ 3.06
KDELR3-202ENST00000409006 HDGFP51858 240 aaKnown RBP34.13■■■■□ 3.05
KDELR3-202ENST00000409006 PROSER2Q86WR7 435 aaPredicted RBP34.11■■■■□ 3.05
KDELR3-202ENST00000409006 NKTRP30414 1462 aaKnown RBP34.09■■■■□ 3.05
KDELR3-202ENST00000409006 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.08■■■■□ 3.05
KDELR3-202ENST00000409006 ADAMTS13Q76LX8 1427 aa34.07■■■■□ 3.04
KDELR3-202ENST00000409006 HFM1A2PYH4 1435 aa34.05■■■■□ 3.04
KDELR3-202ENST00000409006 MED1Q15648 1581 aaPredicted RBP34.05■■■■□ 3.04
KDELR3-202ENST00000409006 TBX22Q9Y458 520 aa34.04■■■■□ 3.04
KDELR3-202ENST00000409006 CLTCL1P53675 1640 aa34.04■■■■□ 3.04
KDELR3-202ENST00000409006 DIP2AQ14689 1571 aa33.99■■■■□ 3.03
KDELR3-202ENST00000409006 TRPM2O94759 1503 aa33.99■■■■□ 3.03
KDELR3-202ENST00000409006 NRXN3Q9Y4C0 1643 aa33.97■■■■□ 3.03
KDELR3-202ENST00000409006 KIF1BO60333 1816 aa33.97■■■■□ 3.03
KDELR3-202ENST00000409006 TRIM52Q96A61 297 aa33.96■■■■□ 3.03
KDELR3-202ENST00000409006 ROBO1Q9Y6N7 1651 aa33.95■■■■□ 3.03
KDELR3-202ENST00000409006 FAM135BQ49AJ0 1406 aa33.95■■■■□ 3.02
KDELR3-202ENST00000409006 ZNF326Q5BKZ1 582 aaKnown RBP33.92■■■■□ 3.02
KDELR3-202ENST00000409006 MSH6P52701 1360 aa33.91■■■■□ 3.02
KDELR3-202ENST00000409006 PTPRUQ92729 1446 aa33.9■■■■□ 3.02
KDELR3-202ENST00000409006 SETBP1Q9Y6X0 1596 aa33.89■■■■□ 3.02
KDELR3-202ENST00000409006 NEXMIFQ5QGS0 1516 aa33.89■■■■□ 3.02
KDELR3-202ENST00000409006 PIK3R4Q99570 1358 aa33.89■■■■□ 3.02
KDELR3-202ENST00000409006 SOCS7O14512 581 aa33.85■■■■□ 3.01
KDELR3-202ENST00000409006 SLC4A1APQ9BWU0 796 aaKnown RBP33.85■■■■□ 3.01
KDELR3-202ENST00000409006 AMOTL2Q9Y2J4 779 aa33.84■■■■□ 3.01
KDELR3-202ENST00000409006 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.84■■■■□ 3.01
KDELR3-202ENST00000409006 XRN1Q8IZH2 1706 aaKnown RBP33.82■■■■□ 3
KDELR3-202ENST00000409006 SLAIN2Q9P270 581 aa33.82■■■■□ 3
KDELR3-202ENST00000409006 NCOA3Q9Y6Q9 1424 aa33.81■■■■□ 3
KDELR3-202ENST00000409006 METP08581 1390 aa33.78■■■■□ 3
KDELR3-202ENST00000409006 FOXD1Q16676 465 aa33.78■■■■□ 3
KDELR3-202ENST00000409006 C14orf37Q86TY3 774 aa33.77■■■■□ 3
KDELR3-202ENST00000409006 PHLPP1O60346 1717 aa33.75■■■□□ 2.99
KDELR3-202ENST00000409006 PPLO60437 1756 aa33.72■■■□□ 2.99
KDELR3-202ENST00000409006 C19orf44Q9H6X5 657 aa33.72■■■□□ 2.99
KDELR3-202ENST00000409006 SETD1AO15047 1707 aaKnown RBP33.72■■■□□ 2.99
KDELR3-202ENST00000409006 PHF23Q9BUL5 403 aaPredicted RBP33.71■■■□□ 2.99
KDELR3-202ENST00000409006 CADPS2Q86UW7 1296 aa33.66■■■□□ 2.98
KDELR3-202ENST00000409006 MPHOSPH9Q99550 1183 aa33.66■■■□□ 2.98
KDELR3-202ENST00000409006 ATF3P18847 181 aa33.65■■■□□ 2.98
KDELR3-202ENST00000409006 COL16A1Q07092 1604 aaPredicted RBP33.64■■■□□ 2.98
KDELR3-202ENST00000409006 VGFO15240 615 aaPredicted RBP33.63■■■□□ 2.97
KDELR3-202ENST00000409006 RPGRIP1LQ68CZ1 1315 aa33.62■■■□□ 2.97
KDELR3-202ENST00000409006 RGS17Q9UGC6 210 aaPredicted RBP33.61■■■□□ 2.97
KDELR3-202ENST00000409006 NALCNQ8IZF0 1738 aa33.61■■■□□ 2.97
KDELR3-202ENST00000409006 CCDC144AA2RUR9 1427 aa33.57■■■□□ 2.96
KDELR3-202ENST00000409006 DCCP43146 1447 aa33.57■■■□□ 2.96
KDELR3-202ENST00000409006 SETD5Q9C0A6 1442 aa33.57■■■□□ 2.96
KDELR3-202ENST00000409006 AHDC1Q5TGY3 1603 aaPredicted RBP33.57■■■□□ 2.96
KDELR3-202ENST00000409006 IFT172Q9UG01 1749 aa33.56■■■□□ 2.96
KDELR3-202ENST00000409006 SPATA31E1Q6ZUB1 1445 aa33.54■■■□□ 2.96
KDELR3-202ENST00000409006 MST1RQ04912 1400 aa33.53■■■□□ 2.96
KDELR3-202ENST00000409006 ADGRL3Q9HAR2 1447 aa33.53■■■□□ 2.96
KDELR3-202ENST00000409006 JCADQ9P266 1359 aa33.53■■■□□ 2.96
KDELR3-202ENST00000409006 BRINP3Q76B58 766 aa33.53■■■□□ 2.96
KDELR3-202ENST00000409006 RGL3Q3MIN7 710 aa33.52■■■□□ 2.96
KDELR3-202ENST00000409006 ROBO2Q9HCK4 1378 aa33.5■■■□□ 2.95
KDELR3-202ENST00000409006 ADGRF5Q8IZF2 1346 aa33.5■■■□□ 2.95
KDELR3-202ENST00000409006 ASXL1Q8IXJ9 1541 aa33.48■■■□□ 2.95
KDELR3-202ENST00000409006 PTCH1Q13635 1447 aa33.48■■■□□ 2.95
KDELR3-202ENST00000409006 RAB3GAP2Q9H2M9 1393 aa33.47■■■□□ 2.95
KDELR3-202ENST00000409006 NHSL1Q5SYE7 1610 aa33.46■■■□□ 2.95
KDELR3-202ENST00000409006 SHPRHQ149N8 1683 aa33.45■■■□□ 2.94
KDELR3-202ENST00000409006 PRAG1Q86YV5 1406 aa33.45■■■□□ 2.94
KDELR3-202ENST00000409006 LRP6O75581 1613 aa33.41■■■□□ 2.94
KDELR3-202ENST00000409006 ACIN1Q9UKV3 1341 aaKnown RBP33.4■■■□□ 2.94
KDELR3-202ENST00000409006 POTEAQ6S8J7 498 aa33.4■■■□□ 2.94
KDELR3-202ENST00000409006 ANKRD30BQ9BXX2 1392 aa33.39■■■□□ 2.94
KDELR3-202ENST00000409006 DDX17Q92841 729 aaKnown RBP33.37■■■□□ 2.93
KDELR3-202ENST00000409006 C1orf167Q5SNV9 1468 aa33.35■■■□□ 2.93
KDELR3-202ENST00000409006 SPATA31A6Q5VVP1 1343 aa33.34■■■□□ 2.93
KDELR3-202ENST00000409006 PIK3C2GO75747 1445 aa33.34■■■□□ 2.93
KDELR3-202ENST00000409006 TMEM132EQ6IEE7 984 aa33.32■■■□□ 2.92
KDELR3-202ENST00000409006 STK26Q9P289 416 aa33.31■■■□□ 2.92
KDELR3-202ENST00000409006 KNDC1Q76NI1 1749 aa33.3■■■□□ 2.92
KDELR3-202ENST00000409006 ORAI2Q96SN7 254 aa33.28■■■□□ 2.92
KDELR3-202ENST00000409006 LAMC1P11047 1609 aa33.28■■■□□ 2.92
KDELR3-202ENST00000409006 TECPR2O15040 1411 aa33.28■■■□□ 2.92
KDELR3-202ENST00000409006 LRPPRCP42704 1394 aaKnown RBP33.27■■■□□ 2.92
KDELR3-202ENST00000409006 WAPLQ7Z5K2 1190 aa33.26■■■□□ 2.91
KDELR3-202ENST00000409006 NRXN1Q9ULB1 1477 aa33.25■■■□□ 2.91
KDELR3-202ENST00000409006 CDC42BPGQ6DT37 1551 aa33.24■■■□□ 2.91
KDELR3-202ENST00000409006 ABCC11Q96J66 1382 aa33.23■■■□□ 2.91
KDELR3-202ENST00000409006 PLEKHH1Q9ULM0 1364 aa33.23■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms