RNA–Protein interactions for RNA: ENST00000404548.5

HDAC11-205, Transcript of histone deacetylase 11, humanhuman

TSL 4 BASIC

Gene HDAC11, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-205ENST00000404548 SLC26A8Q96RN1 970 aa29.93■■■□□ 2.38
HDAC11-205ENST00000404548 PLEKHG1Q9ULL1 1385 aa29.92■■■□□ 2.38
HDAC11-205ENST00000404548 TMEM131LA2VDJ0 1609 aa29.91■■■□□ 2.38
HDAC11-205ENST00000404548 HDGFP51858 240 aaKnown RBP29.89■■■□□ 2.38
HDAC11-205ENST00000404548 PHF23Q9BUL5 403 aaPredicted RBP29.89■■■□□ 2.38
HDAC11-205ENST00000404548 IQGAP3Q86VI3 1631 aa29.88■■■□□ 2.37
HDAC11-205ENST00000404548 RIMS2Q9UQ26 1411 aa29.88■■■□□ 2.37
HDAC11-205ENST00000404548 PROSER2Q86WR7 435 aaPredicted RBP29.86■■■□□ 2.37
HDAC11-205ENST00000404548 E9PCH4 1651 aa29.85■■■□□ 2.37
HDAC11-205ENST00000404548 MYO5BQ9ULV0 1848 aa29.83■■■□□ 2.37
HDAC11-205ENST00000404548 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.82■■■□□ 2.36
HDAC11-205ENST00000404548 PPP1R15AO75807 674 aaPredicted RBP29.81■■■□□ 2.36
HDAC11-205ENST00000404548 SENP3Q9H4L4 574 aaPredicted RBP29.81■■■□□ 2.36
HDAC11-205ENST00000404548 MSH6P52701 1360 aa29.8■■■□□ 2.36
HDAC11-205ENST00000404548 BCANQ96GW7 911 aa29.8■■■□□ 2.36
HDAC11-205ENST00000404548 CHD2O14647 1828 aaKnown RBP29.8■■■□□ 2.36
HDAC11-205ENST00000404548 ROBO1Q9Y6N7 1651 aa29.79■■■□□ 2.36
HDAC11-205ENST00000404548 TBX22Q9Y458 520 aa29.79■■■□□ 2.36
HDAC11-205ENST00000404548 NCOA3Q9Y6Q9 1424 aa29.79■■■□□ 2.36
HDAC11-205ENST00000404548 DIP2AQ14689 1571 aa29.78■■■□□ 2.36
HDAC11-205ENST00000404548 NUP155O75694 1391 aa29.76■■■□□ 2.35
HDAC11-205ENST00000404548 PIK3R4Q99570 1358 aa29.75■■■□□ 2.35
HDAC11-205ENST00000404548 ADAMTS13Q76LX8 1427 aa29.73■■■□□ 2.35
HDAC11-205ENST00000404548 RBM33Q96EV2 1170 aaKnown RBP29.73■■■□□ 2.35
HDAC11-205ENST00000404548 CHGAP10645 457 aaKnown RBP29.69■■■□□ 2.34
HDAC11-205ENST00000404548 SLAIN2Q9P270 581 aa29.69■■■□□ 2.34
HDAC11-205ENST00000404548 RGS17Q9UGC6 210 aaPredicted RBP29.67■■■□□ 2.34
HDAC11-205ENST00000404548 TRPM2O94759 1503 aa29.65■■■□□ 2.34
HDAC11-205ENST00000404548 ITGAEP38570 1179 aa29.62■■■□□ 2.33
HDAC11-205ENST00000404548 SPHKAPQ2M3C7 1700 aa29.61■■■□□ 2.33
HDAC11-205ENST00000404548 PHLPP1O60346 1717 aa29.59■■■□□ 2.33
HDAC11-205ENST00000404548 JCADQ9P266 1359 aa29.59■■■□□ 2.33
HDAC11-205ENST00000404548 RRBP1Q9P2E9 1410 aaKnown RBP29.59■■■□□ 2.33
HDAC11-205ENST00000404548 SETBP1Q9Y6X0 1596 aa29.59■■■□□ 2.33
HDAC11-205ENST00000404548 NUTM2DQ5VT03 806 aaPredicted RBP29.58■■■□□ 2.33
HDAC11-205ENST00000404548 CADPS2Q86UW7 1296 aa29.58■■■□□ 2.33
HDAC11-205ENST00000404548 C19orf44Q9H6X5 657 aa29.58■■■□□ 2.33
HDAC11-205ENST00000404548 COL16A1Q07092 1604 aaPredicted RBP29.56■■■□□ 2.32
HDAC11-205ENST00000404548 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.55■■■□□ 2.32
HDAC11-205ENST00000404548 NRXN3Q9Y4C0 1643 aa29.55■■■□□ 2.32
HDAC11-205ENST00000404548 DCCP43146 1447 aa29.54■■■□□ 2.32
HDAC11-205ENST00000404548 PTPRUQ92729 1446 aa29.54■■■□□ 2.32
HDAC11-205ENST00000404548 C14orf37Q86TY3 774 aa29.54■■■□□ 2.32
HDAC11-205ENST00000404548 AHDC1Q5TGY3 1603 aaPredicted RBP29.53■■■□□ 2.32
HDAC11-205ENST00000404548 XRN1Q8IZH2 1706 aaKnown RBP29.52■■■□□ 2.32
HDAC11-205ENST00000404548 AMOTL2Q9Y2J4 779 aa29.52■■■□□ 2.32
HDAC11-205ENST00000404548 ATF3P18847 181 aa29.51■■■□□ 2.31
HDAC11-205ENST00000404548 PPARGC1BQ86YN6 1023 aaKnown RBP29.5■■■□□ 2.31
HDAC11-205ENST00000404548 NAIPQ13075 1403 aa29.5■■■□□ 2.31
HDAC11-205ENST00000404548 POTEAQ6S8J7 498 aa29.48■■■□□ 2.31
HDAC11-205ENST00000404548 SPATA31A6Q5VVP1 1343 aa29.46■■■□□ 2.31
HDAC11-205ENST00000404548 CLTCL1P53675 1640 aa29.46■■■□□ 2.31
HDAC11-205ENST00000404548 NEXMIFQ5QGS0 1516 aa29.45■■■□□ 2.31
HDAC11-205ENST00000404548 ZNF326Q5BKZ1 582 aaKnown RBP29.44■■■□□ 2.3
HDAC11-205ENST00000404548 METP08581 1390 aa29.41■■■□□ 2.3
HDAC11-205ENST00000404548 SHPRHQ149N8 1683 aa29.41■■■□□ 2.3
HDAC11-205ENST00000404548 HFM1A2PYH4 1435 aa29.41■■■□□ 2.3
HDAC11-205ENST00000404548 BRINP3Q76B58 766 aa29.39■■■□□ 2.3
HDAC11-205ENST00000404548 LRP6O75581 1613 aa29.38■■■□□ 2.29
HDAC11-205ENST00000404548 MST1RQ04912 1400 aa29.37■■■□□ 2.29
HDAC11-205ENST00000404548 ADGRL3Q9HAR2 1447 aa29.37■■■□□ 2.29
HDAC11-205ENST00000404548 KIF1BO60333 1816 aa29.36■■■□□ 2.29
HDAC11-205ENST00000404548 ASXL1Q8IXJ9 1541 aa29.36■■■□□ 2.29
HDAC11-205ENST00000404548 PRAG1Q86YV5 1406 aa29.32■■■□□ 2.28
HDAC11-205ENST00000404548 SETD5Q9C0A6 1442 aa29.32■■■□□ 2.28
HDAC11-205ENST00000404548 PTCH1Q13635 1447 aa29.31■■■□□ 2.28
HDAC11-205ENST00000404548 NHSL1Q5SYE7 1610 aa29.31■■■□□ 2.28
HDAC11-205ENST00000404548 RPGRIP1LQ68CZ1 1315 aa29.29■■■□□ 2.28
HDAC11-205ENST00000404548 VGFO15240 615 aaPredicted RBP29.29■■■□□ 2.28
HDAC11-205ENST00000404548 ZNF772Q68DY9 489 aaPredicted RBP29.29■■■□□ 2.28
HDAC11-205ENST00000404548 NALCNQ8IZF0 1738 aa29.27■■■□□ 2.28
HDAC11-205ENST00000404548 SETD1AO15047 1707 aaKnown RBP29.26■■■□□ 2.27
HDAC11-205ENST00000404548 MEX3CQ5U5Q3 659 aaKnown RBP29.26■■■□□ 2.27
HDAC11-205ENST00000404548 TRIM52Q96A61 297 aa29.24■■■□□ 2.27
HDAC11-205ENST00000404548 SLC4A1APQ9BWU0 796 aaKnown RBP29.24■■■□□ 2.27
HDAC11-205ENST00000404548 LRRC59Q96AG4 307 aaKnown RBP29.21■■■□□ 2.27
HDAC11-205ENST00000404548 LAMC1P11047 1609 aa29.2■■■□□ 2.26
HDAC11-205ENST00000404548 C1orf167Q5SNV9 1468 aa29.18■■■□□ 2.26
HDAC11-205ENST00000404548 ROBO2Q9HCK4 1378 aa29.18■■■□□ 2.26
HDAC11-205ENST00000404548 PPLO60437 1756 aa29.18■■■□□ 2.26
HDAC11-205ENST00000404548 CDK12Q9NYV4 1490 aaPredicted RBP29.15■■■□□ 2.26
HDAC11-205ENST00000404548 PNPLA6Q8IY17 1366 aa29.14■■■□□ 2.26
HDAC11-205ENST00000404548 NUTM2BA6NNL0 878 aaPredicted RBP29.11■■■□□ 2.25
HDAC11-205ENST00000404548 NUTM2EB1AL46 878 aaPredicted RBP29.11■■■□□ 2.25
HDAC11-205ENST00000404548 NUTM2AQ8IVF1 878 aaPredicted RBP29.11■■■□□ 2.25
HDAC11-205ENST00000404548 CCDC144AA2RUR9 1427 aa29.1■■■□□ 2.25
HDAC11-205ENST00000404548 RXRBP28702 533 aa29.09■■■□□ 2.25
HDAC11-205ENST00000404548 AFF2P51816 1311 aa29.08■■■□□ 2.25
HDAC11-205ENST00000404548 SPATA31E1Q6ZUB1 1445 aa29.08■■■□□ 2.25
HDAC11-205ENST00000404548 SOS2Q07890 1332 aaPredicted RBP29.07■■■□□ 2.24
HDAC11-205ENST00000404548 DDX17Q92841 729 aaKnown RBP29.07■■■□□ 2.24
HDAC11-205ENST00000404548 CDC42BPGQ6DT37 1551 aa29.06■■■□□ 2.24
HDAC11-205ENST00000404548 TECPR2O15040 1411 aa29.05■■■□□ 2.24
HDAC11-205ENST00000404548 ANKRD30BQ9BXX2 1392 aa29.05■■■□□ 2.24
HDAC11-205ENST00000404548 ACIN1Q9UKV3 1341 aaKnown RBP29.04■■■□□ 2.24
HDAC11-205ENST00000404548 FOXD1Q16676 465 aa29.02■■■□□ 2.24
HDAC11-205ENST00000404548 ORAI2Q96SN7 254 aa29.02■■■□□ 2.24
HDAC11-205ENST00000404548 IFT172Q9UG01 1749 aa29.01■■■□□ 2.23
HDAC11-205ENST00000404548 ADGRF5Q8IZF2 1346 aa29■■■□□ 2.23
HDAC11-205ENST00000404548 UPF1Q92900 1129 aaKnown RBP eCLIP29■■■□□ 2.238e-9■■■■■ 30.2
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms