RNA–Protein interactions for RNA: ENST00000402468.3

C1GALT1-202, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene C1GALT1, Length 930 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-202ENST00000402468 STAC3Q96MF2 364 aa7.88□□□□□ -1.15
C1GALT1-202ENST00000402468 FLIIQ13045 1269 aa7.87□□□□□ -1.15
C1GALT1-202ENST00000402468 SULF1Q8IWU6 871 aa7.87□□□□□ -1.15
C1GALT1-202ENST00000402468 COL9A1P20849 921 aa7.86□□□□□ -1.15
C1GALT1-202ENST00000402468 SKIV2LQ15477 1246 aaKnown RBP7.86□□□□□ -1.15
C1GALT1-202ENST00000402468 KCNK17Q96T54 332 aa7.86□□□□□ -1.15
C1GALT1-202ENST00000402468 TRIM6-TRIM34B2RNG4 842 aa7.85□□□□□ -1.15
C1GALT1-202ENST00000402468 ONECUT3O60422 494 aaPredicted RBP7.85□□□□□ -1.15
C1GALT1-202ENST00000402468 DNAJB2P25686 324 aa7.85□□□□□ -1.15
C1GALT1-202ENST00000402468 RCCD1A6NED2 376 aa7.84□□□□□ -1.15
C1GALT1-202ENST00000402468 NUDT18Q6ZVK8 323 aa7.84□□□□□ -1.15
C1GALT1-202ENST00000402468 PNMA3Q9UL41 463 aa7.84□□□□□ -1.15
C1GALT1-202ENST00000402468 VPS9D1Q9Y2B5 631 aa7.84□□□□□ -1.15
C1GALT1-202ENST00000402468 PTPN5P54829 565 aa7.83□□□□□ -1.16
C1GALT1-202ENST00000402468 NLRP7Q8WX94 980 aa7.83□□□□□ -1.16
C1GALT1-202ENST00000402468 TATDN2Q93075 761 aa7.83□□□□□ -1.16
C1GALT1-202ENST00000402468 EYA1Q99502 592 aa7.83□□□□□ -1.16
C1GALT1-202ENST00000402468 ZMYND15Q9H091 742 aa7.83□□□□□ -1.16
C1GALT1-202ENST00000402468 TSKSQ9UJT2 592 aa7.83□□□□□ -1.16
C1GALT1-202ENST00000402468 RSPH4AQ5TD94 716 aa7.82□□□□□ -1.16
C1GALT1-202ENST00000402468 SLC4A3P48751 1232 aa7.8□□□□□ -1.16
C1GALT1-202ENST00000402468 CLK2P49760 499 aaKnown RBP7.8□□□□□ -1.16
C1GALT1-202ENST00000402468 IFFO2Q5TF58 517 aa7.8□□□□□ -1.16
C1GALT1-202ENST00000402468 NUTM1Q86Y26 1132 aa7.8□□□□□ -1.16
C1GALT1-202ENST00000402468 FAM198AQ9UFP1 575 aa7.8□□□□□ -1.16
C1GALT1-202ENST00000402468 DDX11L8A8MPP1 907 aa7.79□□□□□ -1.16
C1GALT1-202ENST00000402468 RGS20O76081 388 aa7.79□□□□□ -1.16
C1GALT1-202ENST00000402468 HDGFP51858 240 aaKnown RBP7.79□□□□□ -1.16
C1GALT1-202ENST00000402468 MYSM1Q5VVJ2 828 aa7.79□□□□□ -1.16
C1GALT1-202ENST00000402468 ARXQ96QS3 562 aa7.79□□□□□ -1.16
C1GALT1-202ENST00000402468 TMEM134Q9H6X4 195 aa7.79□□□□□ -1.16
C1GALT1-202ENST00000402468 SLC4A5Q9BY07 1137 aa7.78□□□□□ -1.16
C1GALT1-202ENST00000402468 TBC1D2Q9BYX2 928 aa7.78□□□□□ -1.16
C1GALT1-202ENST00000402468 POLR3EQ9NVU0 708 aa7.78□□□□□ -1.16
C1GALT1-202ENST00000402468 BHMG1C9JSJ3 638 aaPredicted RBP7.77□□□□□ -1.17
C1GALT1-202ENST00000402468 SUPT5HO00267 1087 aaKnown RBP7.77□□□□□ -1.17
C1GALT1-202ENST00000402468 CD46P15529 392 aa7.77□□□□□ -1.17
C1GALT1-202ENST00000402468 PROX2Q3B8N5 592 aa7.77□□□□□ -1.17
C1GALT1-202ENST00000402468 THSD4Q6ZMP0 1018 aa7.77□□□□□ -1.17
C1GALT1-202ENST00000402468 RDH13Q8NBN7 331 aa7.77□□□□□ -1.17
C1GALT1-202ENST00000402468 ZBED2Q9BTP6 218 aa7.76□□□□□ -1.17
C1GALT1-202ENST00000402468 IRX2Q9BZI1 471 aaPredicted RBP7.76□□□□□ -1.17
C1GALT1-202ENST00000402468 KIAA1468Q9P260 1216 aa7.76□□□□□ -1.17
C1GALT1-202ENST00000402468 RABGEF1Q9UJ41 708 aa7.76□□□□□ -1.17
C1GALT1-202ENST00000402468 A0A0G2JS52 829 aa7.75□□□□□ -1.17
C1GALT1-202ENST00000402468 SMAPO00193 183 aa7.75□□□□□ -1.17
C1GALT1-202ENST00000402468 UBTFP17480 764 aaKnown RBP7.75□□□□□ -1.17
C1GALT1-202ENST00000402468 SPIRE2Q8WWL2 714 aa7.75□□□□□ -1.17
C1GALT1-202ENST00000402468 RIC3Q7Z5B4 369 aa7.74□□□□□ -1.17
C1GALT1-202ENST00000402468 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.74□□□□□ -1.17
C1GALT1-202ENST00000402468 GOLGA8CPA6NN73 597 aa7.73□□□□□ -1.17
C1GALT1-202ENST00000402468 TUSC1Q2TAM9 212 aa7.73□□□□□ -1.17
C1GALT1-202ENST00000402468 PROCA1Q8NCQ7 364 aaPredicted RBP7.73□□□□□ -1.17
C1GALT1-202ENST00000402468 WNT2BQ93097 391 aa7.73□□□□□ -1.17
C1GALT1-202ENST00000402468 RAD21O60216 631 aa7.72□□□□□ -1.17
C1GALT1-202ENST00000402468 GJA5P36382 358 aa7.72□□□□□ -1.17
C1GALT1-202ENST00000402468 USP46P62068 366 aa7.72□□□□□ -1.17
C1GALT1-202ENST00000402468 TMEM259Q4ZIN3 620 aa7.72□□□□□ -1.17
C1GALT1-202ENST00000402468 MRPL50Q8N5N7 158 aaKnown RBP7.72□□□□□ -1.17
C1GALT1-202ENST00000402468 NBPF3Q9H094 633 aa7.72□□□□□ -1.17
C1GALT1-202ENST00000402468 C3orf80F5H4A9 247 aa7.71□□□□□ -1.18
C1GALT1-202ENST00000402468 KDM4AO75164 1064 aa7.71□□□□□ -1.18
C1GALT1-202ENST00000402468 MCM6Q14566 821 aa7.71□□□□□ -1.18
C1GALT1-202ENST00000402468 HOMEZQ8IX15 550 aa7.71□□□□□ -1.18
C1GALT1-202ENST00000402468 BANK1Q8NDB2 785 aa7.71□□□□□ -1.18
C1GALT1-202ENST00000402468 SPDYE5A6NIY4 337 aa7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 APBB1O00213 710 aa7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 SPTLC1O15269 473 aa7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 FAM98CQ17RN3 349 aaKnown RBP7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 GRIPAP1Q4V328 841 aa7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 SWT1Q5T5J6 900 aaKnown RBP7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 RSBN1LQ6PCB5 846 aaPredicted RBP7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 LAPTM4BQ86VI4 370 aa7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 SLF2Q8IX21 1173 aa7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 NECTIN2Q92692 538 aa7.7□□□□□ -1.18
C1GALT1-202ENST00000402468 A6NJR5 290 aa7.69□□□□□ -1.18
C1GALT1-202ENST00000402468 RFC5P40937 340 aa7.69□□□□□ -1.18
C1GALT1-202ENST00000402468 PPP2R2DQ66LE6 453 aa7.69□□□□□ -1.18
C1GALT1-202ENST00000402468 LIMD1Q9UGP4 676 aa7.69□□□□□ -1.18
C1GALT1-202ENST00000402468 SEPT9Q9UHD8 586 aaPredicted RBP7.69□□□□□ -1.18
C1GALT1-202ENST00000402468 MOXD2PA6NHM9 499 aa7.68□□□□□ -1.18
C1GALT1-202ENST00000402468 NUTM2BA6NNL0 878 aaPredicted RBP7.68□□□□□ -1.18
C1GALT1-202ENST00000402468 NUTM2EB1AL46 878 aaPredicted RBP7.68□□□□□ -1.18
C1GALT1-202ENST00000402468 NUTM2DQ5VT03 806 aaPredicted RBP7.68□□□□□ -1.18
C1GALT1-202ENST00000402468 NUTM2AQ8IVF1 878 aaPredicted RBP7.68□□□□□ -1.18
C1GALT1-202ENST00000402468 PRM3Q9NNZ6 103 aa7.68□□□□□ -1.18
C1GALT1-202ENST00000402468 GCGRP47871 477 aa7.67□□□□□ -1.18
C1GALT1-202ENST00000402468 CSPP1Q1MSJ5 1256 aa7.67□□□□□ -1.18
C1GALT1-202ENST00000402468 PRPF38BQ5VTL8 546 aaKnown RBP7.66□□□□□ -1.18
C1GALT1-202ENST00000402468 WWC1Q8IX03 1113 aa7.66□□□□□ -1.18
C1GALT1-202ENST00000402468 ZBTB3Q9H5J0 574 aa7.66□□□□□ -1.18
C1GALT1-202ENST00000402468 HOXA2O43364 376 aa7.65□□□□□ -1.18
C1GALT1-202ENST00000402468 RNF40O75150 1001 aa7.65□□□□□ -1.18
C1GALT1-202ENST00000402468 KMT5BQ4FZB7 885 aa7.65□□□□□ -1.18
C1GALT1-202ENST00000402468 FDX1P10109 184 aa7.64□□□□□ -1.19
C1GALT1-202ENST00000402468 NDUFV2P19404 249 aa7.64□□□□□ -1.19
C1GALT1-202ENST00000402468 SAMD7Q7Z3H4 446 aa7.64□□□□□ -1.19
C1GALT1-202ENST00000402468 CLUAP1Q96AJ1 413 aa7.64□□□□□ -1.19
C1GALT1-202ENST00000402468 SOCS7O14512 581 aa7.63□□□□□ -1.19
C1GALT1-202ENST00000402468 LILRB3O75022 631 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms