RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 PANK1Q8TE04 598 aa22.16■■□□□ 1.14
SNED1-204ENST00000401884 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
SNED1-204ENST00000401884 RIPK4P57078 832 aa22.15■■□□□ 1.14
SNED1-204ENST00000401884 OSCARQ8IYS5 282 aa22.15■■□□□ 1.14
SNED1-204ENST00000401884 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
SNED1-204ENST00000401884 DNTTIP2Q5QJE6 756 aaKnown RBP22.14■■□□□ 1.14
SNED1-204ENST00000401884 NGDNQ8NEJ9 315 aaKnown RBP22.14■■□□□ 1.14
SNED1-204ENST00000401884 TCP11L2Q8N4U5 519 aa22.14■■□□□ 1.14
SNED1-204ENST00000401884 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.14
SNED1-204ENST00000401884 NCOA1Q15788 1441 aa22.14■■□□□ 1.13
SNED1-204ENST00000401884 PLB1Q6P1J6 1458 aa22.14■■□□□ 1.13
SNED1-204ENST00000401884 HMMRO75330 724 aa22.13■■□□□ 1.13
SNED1-204ENST00000401884 ANKRD45Q5TZF3 282 aa22.13■■□□□ 1.13
SNED1-204ENST00000401884 DDX19BQ9UMR2 479 aa22.13■■□□□ 1.13
SNED1-204ENST00000401884 FGD1P98174 961 aa22.12■■□□□ 1.13
SNED1-204ENST00000401884 CYB5RLQ6IPT4 315 aa22.12■■□□□ 1.13
SNED1-204ENST00000401884 COG3Q96JB2 828 aa22.12■■□□□ 1.13
SNED1-204ENST00000401884 CABP2Q9NPB3 220 aa22.11■■□□□ 1.13
SNED1-204ENST00000401884 SLC12A5Q9H2X9 1139 aa22.11■■□□□ 1.13
SNED1-204ENST00000401884 GSE1Q14687 1217 aa22.1■■□□□ 1.13
SNED1-204ENST00000401884 AMPHP49418 695 aa22.1■■□□□ 1.13
SNED1-204ENST00000401884 RPRD2Q5VT52 1461 aaKnown RBP22.1■■□□□ 1.13
SNED1-204ENST00000401884 FOXD4L1Q9NU39 408 aa22.1■■□□□ 1.13
SNED1-204ENST00000401884 ARHGEF11O15085 1522 aa22.09■■□□□ 1.13
SNED1-204ENST00000401884 EID1Q9Y6B2 187 aa22.09■■□□□ 1.13
SNED1-204ENST00000401884 GOLGA6L3A6NEY3 463 aa22.08■■□□□ 1.13
SNED1-204ENST00000401884 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
SNED1-204ENST00000401884 KIAA1211Q6ZU35 1233 aa22.08■■□□□ 1.12
SNED1-204ENST00000401884 CAMSAP2Q08AD1 1489 aa22.08■■□□□ 1.12
SNED1-204ENST00000401884 ERBINQ96RT1 1412 aa22.07■■□□□ 1.12
SNED1-204ENST00000401884 PLEKHH2Q8IVE3 1493 aa22.07■■□□□ 1.12
SNED1-204ENST00000401884 ZRSR1Q15695 479 aaKnown RBP22.07■■□□□ 1.12
SNED1-204ENST00000401884 SCAPERQ9BY12 1400 aa22.05■■□□□ 1.12
SNED1-204ENST00000401884 MAGI1Q96QZ7 1491 aaPredicted RBP22.05■■□□□ 1.12
SNED1-204ENST00000401884 LTV1Q96GA3 475 aaPredicted RBP22.05■■□□□ 1.12
SNED1-204ENST00000401884 BCAR3O75815 825 aa22.05■■□□□ 1.12
SNED1-204ENST00000401884 TRIM6-TRIM34B2RNG4 842 aa22.04■■□□□ 1.12
SNED1-204ENST00000401884 PTMSP20962 102 aa22.04■■□□□ 1.12
SNED1-204ENST00000401884 BACH2Q9BYV9 841 aa22.04■■□□□ 1.12
SNED1-204ENST00000401884 GOLGA6L4A6NEF3 574 aa22.03■■□□□ 1.12
SNED1-204ENST00000401884 CHMP4AQ9BY43 222 aa22.02■■□□□ 1.12
SNED1-204ENST00000401884 AAMPQ13685 434 aa22.01■■□□□ 1.11
SNED1-204ENST00000401884 MSNP26038 577 aaKnown RBP22.01■■□□□ 1.11
SNED1-204ENST00000401884 HMOX1P09601 288 aa22.01■■□□□ 1.11
SNED1-204ENST00000401884 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
SNED1-204ENST00000401884 PDE3AQ14432 1141 aa22.01■■□□□ 1.11
SNED1-204ENST00000401884 NAP1L2Q9ULW6 460 aaPredicted RBP22.01■■□□□ 1.11
SNED1-204ENST00000401884 KIF16BQ96L93 1317 aa22■■□□□ 1.11
SNED1-204ENST00000401884 CCDC141Q6ZP82 1450 aa22■■□□□ 1.11
SNED1-204ENST00000401884 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
SNED1-204ENST00000401884 NFKBIBQ15653 356 aa21.98■■□□□ 1.11
SNED1-204ENST00000401884 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
SNED1-204ENST00000401884 TAOK2Q9UL54 1235 aa21.97■■□□□ 1.11
SNED1-204ENST00000401884 API5Q9BZZ5 524 aaKnown RBP21.97■■□□□ 1.11
SNED1-204ENST00000401884 ST18O60284 1047 aa21.96■■□□□ 1.11
SNED1-204ENST00000401884 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
SNED1-204ENST00000401884 GNAI1P63096 354 aa21.95■■□□□ 1.1
SNED1-204ENST00000401884 NOL8Q76FK4 1167 aaKnown RBP21.94■■□□□ 1.1
SNED1-204ENST00000401884 EXOSC9Q06265 439 aaKnown RBP21.94■■□□□ 1.1
SNED1-204ENST00000401884 DDX11L8A8MPP1 907 aa21.94■■□□□ 1.1
SNED1-204ENST00000401884 MSH5O43196 834 aa21.92■■□□□ 1.1
SNED1-204ENST00000401884 FAM69CQ0P6D2 419 aa21.92■■□□□ 1.1
SNED1-204ENST00000401884 C22orf23Q9BZE7 217 aa21.92■■□□□ 1.1
SNED1-204ENST00000401884 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
SNED1-204ENST00000401884 TSR2Q969E8 191 aaKnown RBP21.91■■□□□ 1.1
SNED1-204ENST00000401884 CSB-PGBD3P0DP91 1061 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 PRAM1Q96QH2 718 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 CHMP5Q9NZZ3 219 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 SLFN5Q08AF3 891 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 PDZRN3Q9UPQ7 1066 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 HDAC5Q9UQL6 1122 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
SNED1-204ENST00000401884 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.9■■□□□ 1.1
SNED1-204ENST00000401884 PRKAR2BP31323 418 aa21.88■■□□□ 1.09
SNED1-204ENST00000401884 RILPL2Q969X0 211 aa21.88■■□□□ 1.09
SNED1-204ENST00000401884 DDX49Q9Y6V7 483 aaKnown RBP21.88■■□□□ 1.09
SNED1-204ENST00000401884 C20orf194Q5TEA3 1177 aa21.86■■□□□ 1.09
SNED1-204ENST00000401884 FOXD4L5Q5VV16 416 aaPredicted RBP21.86■■□□□ 1.09
SNED1-204ENST00000401884 WDR63Q8IWG1 891 aa21.86■■□□□ 1.09
SNED1-204ENST00000401884 FOXD4L4Q8WXT5 416 aaPredicted RBP21.86■■□□□ 1.09
SNED1-204ENST00000401884 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.86■■□□□ 1.09
SNED1-204ENST00000401884 RAPGEF3O95398 923 aa21.85■■□□□ 1.09
SNED1-204ENST00000401884 WWC1Q8IX03 1113 aa21.85■■□□□ 1.09
SNED1-204ENST00000401884 SYAP1Q96A49 352 aaPredicted RBP21.85■■□□□ 1.09
SNED1-204ENST00000401884 SLC52A1Q9NWF4 448 aa21.85■■□□□ 1.09
SNED1-204ENST00000401884 GPATCH3Q96I76 525 aa21.84■■□□□ 1.09
SNED1-204ENST00000401884 SKAP1Q86WV1 359 aa21.83■■□□□ 1.09
SNED1-204ENST00000401884 NECTIN2Q92692 538 aa21.83■■□□□ 1.09
SNED1-204ENST00000401884 REC8O95072 547 aa21.83■■□□□ 1.08
SNED1-204ENST00000401884 CABP1Q9NZU7 370 aa21.83■■□□□ 1.08
SNED1-204ENST00000401884 FRAT2O75474 233 aaPredicted RBP21.81■■□□□ 1.08
SNED1-204ENST00000401884 TEFQ10587 303 aa21.81■■□□□ 1.08
SNED1-204ENST00000401884 KIF14Q15058 1648 aa21.81■■□□□ 1.08
SNED1-204ENST00000401884 FKBP5Q13451 457 aaPredicted RBP21.81■■□□□ 1.08
SNED1-204ENST00000401884 ZNF330Q9Y3S2 320 aaPredicted RBP21.81■■□□□ 1.08
SNED1-204ENST00000401884 SKOR2Q2VWA4 1001 aaPredicted RBP21.8■■□□□ 1.08
SNED1-204ENST00000401884 EIF2S2P20042 333 aaKnown RBP21.79■■□□□ 1.08
SNED1-204ENST00000401884 NUP153P49790 1475 aaKnown RBP21.79■■□□□ 1.08
SNED1-204ENST00000401884 NOB1Q9ULX3 412 aaKnown RBP21.79■■□□□ 1.08
SNED1-204ENST00000401884 TSPYL4Q9UJ04 414 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms