RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 PANK1Q8TE04 598 aa22.16■■□□□ 1.14
SNED1-204ENST00000401884 DZIP1LQ8IYY4 767 aaKnown RBP22.16■■□□□ 1.14
SNED1-204ENST00000401884 RIPK4P57078 832 aa22.15■■□□□ 1.14
SNED1-204ENST00000401884 OSCARQ8IYS5 282 aa22.15■■□□□ 1.14
SNED1-204ENST00000401884 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
SNED1-204ENST00000401884 DNTTIP2Q5QJE6 756 aaKnown RBP22.14■■□□□ 1.14
SNED1-204ENST00000401884 NGDNQ8NEJ9 315 aaKnown RBP22.14■■□□□ 1.14
SNED1-204ENST00000401884 TCP11L2Q8N4U5 519 aa22.14■■□□□ 1.14
SNED1-204ENST00000401884 GGNBP2Q9H3C7 697 aa22.14■■□□□ 1.14
SNED1-204ENST00000401884 NCOA1Q15788 1441 aa22.14■■□□□ 1.13
SNED1-204ENST00000401884 PLB1Q6P1J6 1458 aa22.14■■□□□ 1.13
SNED1-204ENST00000401884 HMMRO75330 724 aa22.13■■□□□ 1.13
SNED1-204ENST00000401884 ANKRD45Q5TZF3 282 aa22.13■■□□□ 1.13
SNED1-204ENST00000401884 DDX19BQ9UMR2 479 aa22.13■■□□□ 1.13
SNED1-204ENST00000401884 FGD1P98174 961 aa22.12■■□□□ 1.13
SNED1-204ENST00000401884 CYB5RLQ6IPT4 315 aa22.12■■□□□ 1.13
SNED1-204ENST00000401884 COG3Q96JB2 828 aa22.12■■□□□ 1.13
SNED1-204ENST00000401884 CABP2Q9NPB3 220 aa22.11■■□□□ 1.13
SNED1-204ENST00000401884 SLC12A5Q9H2X9 1139 aa22.11■■□□□ 1.13
SNED1-204ENST00000401884 GSE1Q14687 1217 aa22.1■■□□□ 1.13
SNED1-204ENST00000401884 AMPHP49418 695 aa22.1■■□□□ 1.13
SNED1-204ENST00000401884 RPRD2Q5VT52 1461 aaKnown RBP22.1■■□□□ 1.13
SNED1-204ENST00000401884 FOXD4L1Q9NU39 408 aa22.1■■□□□ 1.13
SNED1-204ENST00000401884 ARHGEF11O15085 1522 aa22.09■■□□□ 1.13
SNED1-204ENST00000401884 EID1Q9Y6B2 187 aa22.09■■□□□ 1.13
SNED1-204ENST00000401884 GOLGA6L3A6NEY3 463 aa22.08■■□□□ 1.13
SNED1-204ENST00000401884 TRHP20396 242 aaPredicted RBP22.08■■□□□ 1.13
SNED1-204ENST00000401884 KIAA1211Q6ZU35 1233 aa22.08■■□□□ 1.12
SNED1-204ENST00000401884 CAMSAP2Q08AD1 1489 aa22.08■■□□□ 1.12
SNED1-204ENST00000401884 ERBINQ96RT1 1412 aa22.07■■□□□ 1.12
SNED1-204ENST00000401884 PLEKHH2Q8IVE3 1493 aa22.07■■□□□ 1.12
SNED1-204ENST00000401884 ZRSR1Q15695 479 aaKnown RBP22.07■■□□□ 1.12
SNED1-204ENST00000401884 SCAPERQ9BY12 1400 aa22.05■■□□□ 1.12
SNED1-204ENST00000401884 MAGI1Q96QZ7 1491 aaPredicted RBP22.05■■□□□ 1.12
SNED1-204ENST00000401884 LTV1Q96GA3 475 aaPredicted RBP22.05■■□□□ 1.12
SNED1-204ENST00000401884 BCAR3O75815 825 aa22.05■■□□□ 1.12
SNED1-204ENST00000401884 TRIM6-TRIM34B2RNG4 842 aa22.04■■□□□ 1.12
SNED1-204ENST00000401884 PTMSP20962 102 aa22.04■■□□□ 1.12
SNED1-204ENST00000401884 BACH2Q9BYV9 841 aa22.04■■□□□ 1.12
SNED1-204ENST00000401884 GOLGA6L4A6NEF3 574 aa22.03■■□□□ 1.12
SNED1-204ENST00000401884 CHMP4AQ9BY43 222 aa22.02■■□□□ 1.12
SNED1-204ENST00000401884 AAMPQ13685 434 aa22.01■■□□□ 1.11
SNED1-204ENST00000401884 MSNP26038 577 aaKnown RBP22.01■■□□□ 1.11
SNED1-204ENST00000401884 HMOX1P09601 288 aa22.01■■□□□ 1.11
SNED1-204ENST00000401884 GRIN2AQ12879 1464 aa22.01■■□□□ 1.11
SNED1-204ENST00000401884 PDE3AQ14432 1141 aa22.01■■□□□ 1.11
SNED1-204ENST00000401884 NAP1L2Q9ULW6 460 aaPredicted RBP22.01■■□□□ 1.11
SNED1-204ENST00000401884 KIF16BQ96L93 1317 aa22■■□□□ 1.11
SNED1-204ENST00000401884 CCDC141Q6ZP82 1450 aa22■■□□□ 1.11
SNED1-204ENST00000401884 LNPKQ9C0E8 428 aa21.99■■□□□ 1.11
SNED1-204ENST00000401884 NFKBIBQ15653 356 aa21.98■■□□□ 1.11
SNED1-204ENST00000401884 ZNF608Q9ULD9 1512 aaPredicted RBP21.98■■□□□ 1.11
SNED1-204ENST00000401884 TAOK2Q9UL54 1235 aa21.97■■□□□ 1.11
SNED1-204ENST00000401884 API5Q9BZZ5 524 aaKnown RBP21.97■■□□□ 1.11
SNED1-204ENST00000401884 ST18O60284 1047 aa21.96■■□□□ 1.11
SNED1-204ENST00000401884 THOC2Q8NI27 1593 aaKnown RBP21.95■■□□□ 1.1
SNED1-204ENST00000401884 GNAI1P63096 354 aa21.95■■□□□ 1.1
SNED1-204ENST00000401884 NOL8Q76FK4 1167 aaKnown RBP21.94■■□□□ 1.1
SNED1-204ENST00000401884 EXOSC9Q06265 439 aaKnown RBP21.94■■□□□ 1.1
SNED1-204ENST00000401884 DDX11L8A8MPP1 907 aa21.94■■□□□ 1.1
SNED1-204ENST00000401884 MSH5O43196 834 aa21.92■■□□□ 1.1
SNED1-204ENST00000401884 FAM69CQ0P6D2 419 aa21.92■■□□□ 1.1
SNED1-204ENST00000401884 C22orf23Q9BZE7 217 aa21.92■■□□□ 1.1
SNED1-204ENST00000401884 UGGT2Q9NYU1 1516 aa21.91■■□□□ 1.1
SNED1-204ENST00000401884 TSR2Q969E8 191 aaKnown RBP21.91■■□□□ 1.1
SNED1-204ENST00000401884 CSB-PGBD3P0DP91 1061 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 PRAM1Q96QH2 718 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 CHMP5Q9NZZ3 219 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 SLFN5Q08AF3 891 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 PDZRN3Q9UPQ7 1066 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 HDAC5Q9UQL6 1122 aa21.9■■□□□ 1.1
SNED1-204ENST00000401884 GPATCH8Q9UKJ3 1502 aaKnown RBP21.9■■□□□ 1.1
SNED1-204ENST00000401884 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.9■■□□□ 1.1
SNED1-204ENST00000401884 PRKAR2BP31323 418 aa21.88■■□□□ 1.09
SNED1-204ENST00000401884 RILPL2Q969X0 211 aa21.88■■□□□ 1.09
SNED1-204ENST00000401884 DDX49Q9Y6V7 483 aaKnown RBP21.88■■□□□ 1.09
SNED1-204ENST00000401884 C20orf194Q5TEA3 1177 aa21.86■■□□□ 1.09
SNED1-204ENST00000401884 FOXD4L5Q5VV16 416 aaPredicted RBP21.86■■□□□ 1.09
SNED1-204ENST00000401884 WDR63Q8IWG1 891 aa21.86■■□□□ 1.09
SNED1-204ENST00000401884 FOXD4L4Q8WXT5 416 aaPredicted RBP21.86■■□□□ 1.09
SNED1-204ENST00000401884 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.86■■□□□ 1.09
SNED1-204ENST00000401884 RAPGEF3O95398 923 aa21.85■■□□□ 1.09
SNED1-204ENST00000401884 WWC1Q8IX03 1113 aa21.85■■□□□ 1.09
SNED1-204ENST00000401884 SYAP1Q96A49 352 aaPredicted RBP21.85■■□□□ 1.09
SNED1-204ENST00000401884 SLC52A1Q9NWF4 448 aa21.85■■□□□ 1.09
SNED1-204ENST00000401884 GPATCH3Q96I76 525 aa21.84■■□□□ 1.09
SNED1-204ENST00000401884 SKAP1Q86WV1 359 aa21.83■■□□□ 1.09
SNED1-204ENST00000401884 NECTIN2Q92692 538 aa21.83■■□□□ 1.09
SNED1-204ENST00000401884 REC8O95072 547 aa21.83■■□□□ 1.08
SNED1-204ENST00000401884 CABP1Q9NZU7 370 aa21.83■■□□□ 1.08
SNED1-204ENST00000401884 FRAT2O75474 233 aaPredicted RBP21.81■■□□□ 1.08
SNED1-204ENST00000401884 TEFQ10587 303 aa21.81■■□□□ 1.08
SNED1-204ENST00000401884 KIF14Q15058 1648 aa21.81■■□□□ 1.08
SNED1-204ENST00000401884 FKBP5Q13451 457 aaPredicted RBP21.81■■□□□ 1.08
SNED1-204ENST00000401884 ZNF330Q9Y3S2 320 aaPredicted RBP21.81■■□□□ 1.08
SNED1-204ENST00000401884 SKOR2Q2VWA4 1001 aaPredicted RBP21.8■■□□□ 1.08
SNED1-204ENST00000401884 EIF2S2P20042 333 aaKnown RBP21.79■■□□□ 1.08
SNED1-204ENST00000401884 NUP153P49790 1475 aaKnown RBP21.79■■□□□ 1.08
SNED1-204ENST00000401884 NOB1Q9ULX3 412 aaKnown RBP21.79■■□□□ 1.08
SNED1-204ENST00000401884 TSPYL4Q9UJ04 414 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms