RNA–Protein interactions for RNA: ENST00000399959.6

DDX3X-201, Transcript of DEAD-box helicase 3 X-linked, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX3X, Length 5,399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-201ENST00000399959 CHMP4CQ96CF2 233 aa16.61■□□□□ 0.25
DDX3X-201ENST00000399959 LETM1O95202 739 aaPredicted RBP16.6■□□□□ 0.25
DDX3X-201ENST00000399959 SOX12O15370 315 aa16.6■□□□□ 0.25
DDX3X-201ENST00000399959 LMOD3Q0VAK6 560 aa16.6■□□□□ 0.25
DDX3X-201ENST00000399959 RUFY1Q96T51 708 aa16.6■□□□□ 0.25
DDX3X-201ENST00000399959 USP47Q96K76 1375 aa16.6■□□□□ 0.25
DDX3X-201ENST00000399959 APAF1O14727 1248 aa16.6■□□□□ 0.25
DDX3X-201ENST00000399959 INTS3Q68E01 1043 aaKnown RBP16.6■□□□□ 0.25
DDX3X-201ENST00000399959 SPAG9O60271 1321 aaKnown RBP16.6■□□□□ 0.25
DDX3X-201ENST00000399959 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
DDX3X-201ENST00000399959 CCDC7Q96M83 1385 aa16.59■□□□□ 0.25
DDX3X-201ENST00000399959 CHMP4AQ9BY43 222 aa16.59■□□□□ 0.25
DDX3X-201ENST00000399959 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
DDX3X-201ENST00000399959 IPO7O95373 1038 aaKnown RBP16.58■□□□□ 0.24
DDX3X-201ENST00000399959 PDE4CQ08493 712 aa16.58■□□□□ 0.24
DDX3X-201ENST00000399959 ZSCAN30Q86W11 494 aa16.58■□□□□ 0.24
DDX3X-201ENST00000399959 PRPF40AO75400 957 aaKnown RBP16.57■□□□□ 0.24
DDX3X-201ENST00000399959 VPS37CA5D8V6 355 aaPredicted RBP16.57■□□□□ 0.24
DDX3X-201ENST00000399959 ERCC4Q92889 916 aaPredicted RBP16.56■□□□□ 0.24
DDX3X-201ENST00000399959 PRDM10Q9NQV6 1147 aa16.56■□□□□ 0.24
DDX3X-201ENST00000399959 MCM4P33991 863 aa16.56■□□□□ 0.24
DDX3X-201ENST00000399959 ANKRD30AQ9BXX3 1397 aa16.56■□□□□ 0.24
DDX3X-201ENST00000399959 TRIM5Q9C035 493 aa16.55■□□□□ 0.24
DDX3X-201ENST00000399959 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
DDX3X-201ENST00000399959 CUX2O14529 1486 aa16.55■□□□□ 0.24
DDX3X-201ENST00000399959 AKNAQ7Z591 1439 aa16.55■□□□□ 0.24
DDX3X-201ENST00000399959 ZKSCAN1P17029 563 aaPredicted RBP16.54■□□□□ 0.24
DDX3X-201ENST00000399959 CDR1P51861 262 aa16.54■□□□□ 0.24
DDX3X-201ENST00000399959 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
DDX3X-201ENST00000399959 CEP89Q96ST8 783 aa16.54■□□□□ 0.24
DDX3X-201ENST00000399959 CDC45O75419 566 aa16.54■□□□□ 0.24
DDX3X-201ENST00000399959 CCDC112Q8NEF3 446 aa16.54■□□□□ 0.24
DDX3X-201ENST00000399959 ANO2Q9NQ90 1003 aa16.54■□□□□ 0.24
DDX3X-201ENST00000399959 GORABQ5T7V8 394 aa16.53■□□□□ 0.24
DDX3X-201ENST00000399959 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.53■□□□□ 0.24
DDX3X-201ENST00000399959 PDCL2Q8N4E4 241 aa16.53■□□□□ 0.24
DDX3X-201ENST00000399959 RUFY2Q8WXA3 655 aa16.53■□□□□ 0.24
DDX3X-201ENST00000399959 PANK1Q8TE04 598 aa16.53■□□□□ 0.24
DDX3X-201ENST00000399959 KIF7Q2M1P5 1343 aa16.53■□□□□ 0.24
DDX3X-201ENST00000399959 CCDC73Q6ZRK6 1079 aa16.52■□□□□ 0.24
DDX3X-201ENST00000399959 BAZ1AQ9NRL2 1556 aaPredicted RBP16.52■□□□□ 0.24
DDX3X-201ENST00000399959 RRP12Q5JTH9 1297 aaKnown RBP16.52■□□□□ 0.23
DDX3X-201ENST00000399959 LMOD2Q6P5Q4 547 aa16.52■□□□□ 0.23
DDX3X-201ENST00000399959 NAT10Q9H0A0 1025 aaKnown RBP16.51■□□□□ 0.23
DDX3X-201ENST00000399959 CCDC191Q8NCU4 936 aa16.51■□□□□ 0.23
DDX3X-201ENST00000399959 ANKRD20A12PQ8NF67 263 aa16.51■□□□□ 0.23
DDX3X-201ENST00000399959 FBXW7Q969H0 707 aa16.51■□□□□ 0.23
DDX3X-201ENST00000399959 NPHP1O15259 732 aa16.51■□□□□ 0.23
DDX3X-201ENST00000399959 STK26Q9P289 416 aa16.51■□□□□ 0.23
DDX3X-201ENST00000399959 CCDC18Q5T9S5 1454 aa16.51■□□□□ 0.23
DDX3X-201ENST00000399959 ELL2O00472 640 aaPredicted RBP16.51■□□□□ 0.23
DDX3X-201ENST00000399959 ERICH4A6NGS2 130 aa16.5■□□□□ 0.23
DDX3X-201ENST00000399959 CCP110O43303 1012 aa16.5■□□□□ 0.23
DDX3X-201ENST00000399959 TSPYL1Q9H0U9 437 aa16.5■□□□□ 0.23
DDX3X-201ENST00000399959 CBX1P83916 185 aa16.5■□□□□ 0.23
DDX3X-201ENST00000399959 SPC24Q8NBT2 197 aa16.5■□□□□ 0.23
DDX3X-201ENST00000399959 EIF4G1Q04637 1599 aaKnown RBP16.49■□□□□ 0.23
DDX3X-201ENST00000399959 BRD4O60885 1362 aaPredicted RBP16.49■□□□□ 0.23
DDX3X-201ENST00000399959 TERF2IPQ9NYB0 399 aa16.49■□□□□ 0.23
DDX3X-201ENST00000399959 HOOK1Q9UJC3 728 aaKnown RBP16.49■□□□□ 0.23
DDX3X-201ENST00000399959 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
DDX3X-201ENST00000399959 TAF7LQ5H9L4 462 aa16.49■□□□□ 0.23
DDX3X-201ENST00000399959 SMG6Q86US8 1419 aaKnown RBP16.48■□□□□ 0.23
DDX3X-201ENST00000399959 DEF6Q9H4E7 631 aa16.48■□□□□ 0.23
DDX3X-201ENST00000399959 WASHC2AQ641Q2 1341 aa16.48■□□□□ 0.23
DDX3X-201ENST00000399959 PDZRN3Q9UPQ7 1066 aa16.48■□□□□ 0.23
DDX3X-201ENST00000399959 DCTN1Q14203 1278 aa16.48■□□□□ 0.23
DDX3X-201ENST00000399959 RABEP1Q15276 862 aa16.48■□□□□ 0.23
DDX3X-201ENST00000399959 HSP90AB3PQ58FF7 597 aa16.48■□□□□ 0.23
DDX3X-201ENST00000399959 CECR2Q9BXF3 1484 aa16.47■□□□□ 0.23
DDX3X-201ENST00000399959 PCMTD1Q96MG8 357 aaPredicted RBP16.47■□□□□ 0.23
DDX3X-201ENST00000399959 CDCA7LQ96GN5 454 aa16.46■□□□□ 0.23
DDX3X-201ENST00000399959 API5Q9BZZ5 524 aaKnown RBP16.46■□□□□ 0.23
DDX3X-201ENST00000399959 ZHX1Q9UKY1 873 aaPredicted RBP16.46■□□□□ 0.23
DDX3X-201ENST00000399959 CIZ1Q9ULV3 898 aaPredicted RBP16.46■□□□□ 0.23
DDX3X-201ENST00000399959 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.46■□□□□ 0.23
DDX3X-201ENST00000399959 MPNDQ8N594 471 aa16.46■□□□□ 0.23
DDX3X-201ENST00000399959 USP8P40818 1118 aa16.46■□□□□ 0.22
DDX3X-201ENST00000399959 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
DDX3X-201ENST00000399959 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
DDX3X-201ENST00000399959 RNF20Q5VTR2 975 aa16.44■□□□□ 0.22
DDX3X-201ENST00000399959 CGNQ9P2M7 1197 aaKnown RBP16.44■□□□□ 0.22
DDX3X-201ENST00000399959 K7ELQ4 463 aaPredicted RBP16.44■□□□□ 0.22
DDX3X-201ENST00000399959 PDILTQ8N807 584 aa16.44■□□□□ 0.22
DDX3X-201ENST00000399959 TOMM22Q9NS69 142 aa16.44■□□□□ 0.22
DDX3X-201ENST00000399959 MCM2P49736 904 aa16.43■□□□□ 0.22
DDX3X-201ENST00000399959 CPLX2Q6PUV4 134 aaKnown RBP16.43■□□□□ 0.22
DDX3X-201ENST00000399959 TRIM29Q14134 588 aa16.42■□□□□ 0.22
DDX3X-201ENST00000399959 AXDND1Q5T1B0 1012 aaPredicted RBP16.42■□□□□ 0.22
DDX3X-201ENST00000399959 AEBP1Q8IUX7 1158 aa16.42■□□□□ 0.22
DDX3X-201ENST00000399959 CALCOCO1Q9P1Z2 691 aa16.42■□□□□ 0.22
DDX3X-201ENST00000399959 SMC2O95347 1197 aa16.42■□□□□ 0.22
DDX3X-201ENST00000399959 CCDC192P0DO97 292 aa16.42■□□□□ 0.22
DDX3X-201ENST00000399959 CCDC27Q2M243 656 aa16.42■□□□□ 0.22
DDX3X-201ENST00000399959 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
DDX3X-201ENST00000399959 CAGE1Q8TC20 777 aa16.41■□□□□ 0.22
DDX3X-201ENST00000399959 RUNDC1Q96C34 613 aa16.41■□□□□ 0.22
DDX3X-201ENST00000399959 KIAA0754O94854 1291 aa16.41■□□□□ 0.22
DDX3X-201ENST00000399959 OLFM4Q6UX06 510 aa16.41■□□□□ 0.22
DDX3X-201ENST00000399959 SDF4Q9BRK5 362 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms