RNA–Protein interactions for RNA: ENST00000399753.2

MSRB1-202, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-202ENST00000399753 ROBO1Q9Y6N7 1651 aa26.61■■□□□ 1.85
MSRB1-202ENST00000399753 RPRD2Q5VT52 1461 aaKnown RBP26.61■■□□□ 1.85
MSRB1-202ENST00000399753 ANKRD50Q9ULJ7 1429 aa26.59■■□□□ 1.85
MSRB1-202ENST00000399753 FAM50AQ14320 339 aaKnown RBP26.59■■□□□ 1.85
MSRB1-202ENST00000399753 MSH6P52701 1360 aa26.58■■□□□ 1.84
MSRB1-202ENST00000399753 ZFYVE9O95405 1425 aa26.57■■□□□ 1.84
MSRB1-202ENST00000399753 POTEAQ6S8J7 498 aa26.56■■□□□ 1.84
MSRB1-202ENST00000399753 PLEKHG1Q9ULL1 1385 aa26.56■■□□□ 1.84
MSRB1-202ENST00000399753 SLAIN2Q9P270 581 aa26.55■■□□□ 1.84
MSRB1-202ENST00000399753 HDGFP51858 240 aaKnown RBP26.54■■□□□ 1.84
MSRB1-202ENST00000399753 RIMS2Q9UQ26 1411 aa26.54■■□□□ 1.84
MSRB1-202ENST00000399753 PPP1R15AO75807 674 aaPredicted RBP26.52■■□□□ 1.84
MSRB1-202ENST00000399753 TBX22Q9Y458 520 aa26.49■■□□□ 1.83
MSRB1-202ENST00000399753 TMEM131LA2VDJ0 1609 aa26.49■■□□□ 1.83
MSRB1-202ENST00000399753 CHD2O14647 1828 aaKnown RBP26.49■■□□□ 1.83
MSRB1-202ENST00000399753 MYO5BQ9ULV0 1848 aa26.49■■□□□ 1.83
MSRB1-202ENST00000399753 GCC2Q8IWJ2 1684 aa26.48■■□□□ 1.83
MSRB1-202ENST00000399753 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.46■■□□□ 1.83
MSRB1-202ENST00000399753 JCADQ9P266 1359 aa26.46■■□□□ 1.83
MSRB1-202ENST00000399753 CHGAP10645 457 aaKnown RBP26.45■■□□□ 1.82
MSRB1-202ENST00000399753 PHLPP1O60346 1717 aa26.45■■□□□ 1.82
MSRB1-202ENST00000399753 NCOA3Q9Y6Q9 1424 aa26.44■■□□□ 1.82
MSRB1-202ENST00000399753 UNC13BO14795 1591 aa26.43■■□□□ 1.82
MSRB1-202ENST00000399753 ADAMTS13Q76LX8 1427 aa26.4■■□□□ 1.82
MSRB1-202ENST00000399753 NUTM2DQ5VT03 806 aaPredicted RBP26.4■■□□□ 1.82
MSRB1-202ENST00000399753 C14orf37Q86TY3 774 aa26.4■■□□□ 1.82
MSRB1-202ENST00000399753 E9PCH4 1651 aa26.38■■□□□ 1.81
MSRB1-202ENST00000399753 ROCK1Q13464 1354 aa26.37■■□□□ 1.81
MSRB1-202ENST00000399753 PIK3R4Q99570 1358 aa26.37■■□□□ 1.81
MSRB1-202ENST00000399753 COL16A1Q07092 1604 aaPredicted RBP26.37■■□□□ 1.81
MSRB1-202ENST00000399753 CADPS2Q86UW7 1296 aa26.36■■□□□ 1.81
MSRB1-202ENST00000399753 C19orf44Q9H6X5 657 aa26.36■■□□□ 1.81
MSRB1-202ENST00000399753 DIP2AQ14689 1571 aa26.36■■□□□ 1.81
MSRB1-202ENST00000399753 IQGAP3Q86VI3 1631 aa26.33■■□□□ 1.81
MSRB1-202ENST00000399753 ATF3P18847 181 aa26.33■■□□□ 1.81
MSRB1-202ENST00000399753 SPATA31A6Q5VVP1 1343 aa26.33■■□□□ 1.81
MSRB1-202ENST00000399753 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.31■■□□□ 1.8
MSRB1-202ENST00000399753 AMOTL2Q9Y2J4 779 aa26.31■■□□□ 1.8
MSRB1-202ENST00000399753 NUP155O75694 1391 aa26.31■■□□□ 1.8
MSRB1-202ENST00000399753 LRP6O75581 1613 aa26.3■■□□□ 1.8
MSRB1-202ENST00000399753 TRPM2O94759 1503 aa26.29■■□□□ 1.8
MSRB1-202ENST00000399753 AHDC1Q5TGY3 1603 aaPredicted RBP26.28■■□□□ 1.8
MSRB1-202ENST00000399753 PTPRUQ92729 1446 aa26.28■■□□□ 1.8
MSRB1-202ENST00000399753 MEX3CQ5U5Q3 659 aaKnown RBP26.27■■□□□ 1.8
MSRB1-202ENST00000399753 SETD1AO15047 1707 aaKnown RBP26.27■■□□□ 1.8
MSRB1-202ENST00000399753 BRINP3Q76B58 766 aa26.25■■□□□ 1.79
MSRB1-202ENST00000399753 ZNF772Q68DY9 489 aaPredicted RBP26.24■■□□□ 1.79
MSRB1-202ENST00000399753 ITGAEP38570 1179 aa26.22■■□□□ 1.79
MSRB1-202ENST00000399753 SHPRHQ149N8 1683 aa26.22■■□□□ 1.79
MSRB1-202ENST00000399753 DCCP43146 1447 aa26.21■■□□□ 1.79
MSRB1-202ENST00000399753 SETBP1Q9Y6X0 1596 aa26.18■■□□□ 1.78
MSRB1-202ENST00000399753 NRXN3Q9Y4C0 1643 aa26.17■■□□□ 1.78
MSRB1-202ENST00000399753 XRN1Q8IZH2 1706 aaKnown RBP26.17■■□□□ 1.78
MSRB1-202ENST00000399753 ZNF326Q5BKZ1 582 aaKnown RBP26.16■■□□□ 1.78
MSRB1-202ENST00000399753 TRIM52Q96A61 297 aa26.16■■□□□ 1.78
MSRB1-202ENST00000399753 NUTM2BA6NNL0 878 aaPredicted RBP26.15■■□□□ 1.78
MSRB1-202ENST00000399753 NUTM2EB1AL46 878 aaPredicted RBP26.15■■□□□ 1.78
MSRB1-202ENST00000399753 NUTM2AQ8IVF1 878 aaPredicted RBP26.15■■□□□ 1.78
MSRB1-202ENST00000399753 ASXL1Q8IXJ9 1541 aa26.14■■□□□ 1.78
MSRB1-202ENST00000399753 METP08581 1390 aa26.14■■□□□ 1.78
MSRB1-202ENST00000399753 MST1RQ04912 1400 aa26.14■■□□□ 1.77
MSRB1-202ENST00000399753 UPF1Q92900 1129 aaKnown RBP eCLIP26.13■■□□□ 1.77
MSRB1-202ENST00000399753 SPHKAPQ2M3C7 1700 aa26.13■■□□□ 1.77
MSRB1-202ENST00000399753 SETD5Q9C0A6 1442 aa26.13■■□□□ 1.77
MSRB1-202ENST00000399753 RXRBP28702 533 aa26.12■■□□□ 1.77
MSRB1-202ENST00000399753 LRRC59Q96AG4 307 aaKnown RBP26.08■■□□□ 1.77
MSRB1-202ENST00000399753 AFF2P51816 1311 aa26.08■■□□□ 1.77
MSRB1-202ENST00000399753 ADGRL3Q9HAR2 1447 aa26.07■■□□□ 1.76
MSRB1-202ENST00000399753 PPARGC1BQ86YN6 1023 aaKnown RBP26.07■■□□□ 1.76
MSRB1-202ENST00000399753 NHSL1Q5SYE7 1610 aa26.06■■□□□ 1.76
MSRB1-202ENST00000399753 CDK12Q9NYV4 1490 aaPredicted RBP26.05■■□□□ 1.76
MSRB1-202ENST00000399753 NEXMIFQ5QGS0 1516 aa26.04■■□□□ 1.76
MSRB1-202ENST00000399753 DDX17Q92841 729 aaKnown RBP26.04■■□□□ 1.76
MSRB1-202ENST00000399753 CLTCL1P53675 1640 aa26.03■■□□□ 1.76
MSRB1-202ENST00000399753 PNPLA6Q8IY17 1366 aa26.01■■□□□ 1.75
MSRB1-202ENST00000399753 C8orf37Q96NL8 207 aa25.99■■□□□ 1.75
MSRB1-202ENST00000399753 NALCNQ8IZF0 1738 aa25.99■■□□□ 1.75
MSRB1-202ENST00000399753 C1orf167Q5SNV9 1468 aa25.97■■□□□ 1.75
MSRB1-202ENST00000399753 QTRT2Q9H974 415 aaKnown RBP25.96■■□□□ 1.75
MSRB1-202ENST00000399753 VGFO15240 615 aaPredicted RBP25.94■■□□□ 1.74
MSRB1-202ENST00000399753 RBM6P78332 1123 aaKnown RBP25.94■■□□□ 1.74
MSRB1-202ENST00000399753 NAIPQ13075 1403 aa25.94■■□□□ 1.74
MSRB1-202ENST00000399753 PTCH1Q13635 1447 aa25.94■■□□□ 1.74
MSRB1-202ENST00000399753 KIF1BO60333 1816 aa25.93■■□□□ 1.74
MSRB1-202ENST00000399753 ROBO2Q9HCK4 1378 aa25.93■■□□□ 1.74
MSRB1-202ENST00000399753 RGS12O14924 1447 aa25.92■■□□□ 1.74
MSRB1-202ENST00000399753 RRBP1Q9P2E9 1410 aaKnown RBP25.9■■□□□ 1.74
MSRB1-202ENST00000399753 ADAMTS2O95450 1211 aa25.9■■□□□ 1.74
MSRB1-202ENST00000399753 NGLY1Q96IV0 654 aa25.9■■□□□ 1.74
MSRB1-202ENST00000399753 ORAI2Q96SN7 254 aa25.9■■□□□ 1.74
MSRB1-202ENST00000399753 SOS2Q07890 1332 aaPredicted RBP25.89■■□□□ 1.74
MSRB1-202ENST00000399753 LAMC1P11047 1609 aa25.89■■□□□ 1.74
MSRB1-202ENST00000399753 PRAG1Q86YV5 1406 aa25.88■■□□□ 1.73
MSRB1-202ENST00000399753 RPGRIP1LQ68CZ1 1315 aa25.88■■□□□ 1.73
MSRB1-202ENST00000399753 HFM1A2PYH4 1435 aa25.83■■□□□ 1.73
MSRB1-202ENST00000399753 SLC4A1APQ9BWU0 796 aaKnown RBP25.82■■□□□ 1.72
MSRB1-202ENST00000399753 USP21Q9UK80 565 aa25.81■■□□□ 1.72
MSRB1-202ENST00000399753 FNBP4Q8N3X1 1017 aaPredicted RBP25.8■■□□□ 1.72
MSRB1-202ENST00000399753 TRPC5Q9UL62 973 aaPredicted RBP25.78■■□□□ 1.72
MSRB1-202ENST00000399753 PPLO60437 1756 aa25.76■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 322.8 ms