RNA–Protein interactions for RNA: ENST00000399537.8

TNRC18-203, Transcript of trinucleotide repeat containing 18, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNRC18, Length 10,572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-203ENST00000399537 ANO2Q9NQ90 1003 aa17.61■□□□□ 0.41
TNRC18-203ENST00000399537 KRI1Q8N9T8 703 aaKnown RBP17.61■□□□□ 0.41
TNRC18-203ENST00000399537 EXOC6Q8TAG9 804 aa17.61■□□□□ 0.41
TNRC18-203ENST00000399537 C1orf141Q5JVX7 400 aa17.6■□□□□ 0.41
TNRC18-203ENST00000399537 RRP12Q5JTH9 1297 aaKnown RBP17.6■□□□□ 0.41
TNRC18-203ENST00000399537 CRBNQ96SW2 442 aa17.6■□□□□ 0.41
TNRC18-203ENST00000399537 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
TNRC18-203ENST00000399537 RUFY2Q8WXA3 655 aa17.57■□□□□ 0.4
TNRC18-203ENST00000399537 CGNL1Q0VF96 1302 aa17.57■□□□□ 0.4
TNRC18-203ENST00000399537 HOMER1Q86YM7 354 aa17.57■□□□□ 0.4
TNRC18-203ENST00000399537 UACAQ9BZF9 1416 aa17.57■□□□□ 0.4
TNRC18-203ENST00000399537 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.57■□□□□ 0.4
TNRC18-203ENST00000399537 CCDC144AA2RUR9 1427 aa17.56■□□□□ 0.4
TNRC18-203ENST00000399537 CCDC47Q96A33 483 aaKnown RBP17.56■□□□□ 0.4
TNRC18-203ENST00000399537 AK7Q96M32 723 aa17.56■□□□□ 0.4
TNRC18-203ENST00000399537 REC8O95072 547 aa17.56■□□□□ 0.4
TNRC18-203ENST00000399537 FBXW7Q969H0 707 aa17.56■□□□□ 0.4
TNRC18-203ENST00000399537 CPLX1O14810 134 aa17.55■□□□□ 0.4
TNRC18-203ENST00000399537 APPP05067 770 aa17.55■□□□□ 0.4
TNRC18-203ENST00000399537 RUFY1Q96T51 708 aa17.55■□□□□ 0.4
TNRC18-203ENST00000399537 VPS37DQ86XT2 251 aa17.55■□□□□ 0.4
TNRC18-203ENST00000399537 CCDC43Q96MW1 224 aaKnown RBP17.55■□□□□ 0.4
TNRC18-203ENST00000399537 C9orf78Q9NZ63 289 aaPredicted RBP17.55■□□□□ 0.4
TNRC18-203ENST00000399537 FAM13BQ9NYF5 915 aa17.54■□□□□ 0.4
TNRC18-203ENST00000399537 DHX16O60231 1041 aaKnown RBP17.54■□□□□ 0.4
TNRC18-203ENST00000399537 BCL2L13Q9BXK5 485 aa17.54■□□□□ 0.4
TNRC18-203ENST00000399537 NAP1L1P55209 391 aaKnown RBP17.54■□□□□ 0.4
TNRC18-203ENST00000399537 BICD2Q8TD16 824 aa17.53■□□□□ 0.4
TNRC18-203ENST00000399537 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.53■□□□□ 0.45e-7■■■■■ 107.3
TNRC18-203ENST00000399537 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.53■□□□□ 0.4
TNRC18-203ENST00000399537 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
TNRC18-203ENST00000399537 NFXL1Q6ZNB6 911 aa17.53■□□□□ 0.4
TNRC18-203ENST00000399537 NEXNQ0ZGT2 675 aa17.53■□□□□ 0.4
TNRC18-203ENST00000399537 ZKSCAN2Q63HK3 967 aa17.53■□□□□ 0.4
TNRC18-203ENST00000399537 ROCK1Q13464 1354 aa17.53■□□□□ 0.4
TNRC18-203ENST00000399537 EFCAB2Q5VUJ9 269 aa17.53■□□□□ 0.4
TNRC18-203ENST00000399537 PANK3Q9H999 370 aa17.53■□□□□ 0.4
TNRC18-203ENST00000399537 ZKSCAN1P17029 563 aaPredicted RBP17.52■□□□□ 0.4
TNRC18-203ENST00000399537 WASHC2CQ9Y4E1 1318 aa17.52■□□□□ 0.4
TNRC18-203ENST00000399537 NUTM2FA1L443 756 aa17.52■□□□□ 0.4
TNRC18-203ENST00000399537 FOSBP53539 338 aa17.52■□□□□ 0.4
TNRC18-203ENST00000399537 SMARCA4P51532 1647 aa17.52■□□□□ 0.4
TNRC18-203ENST00000399537 E9PSI1 815 aa17.52■□□□□ 0.4
TNRC18-203ENST00000399537 TTC5Q8N0Z6 440 aa17.52■□□□□ 0.4
TNRC18-203ENST00000399537 COG3Q96JB2 828 aa17.51■□□□□ 0.39
TNRC18-203ENST00000399537 KIF3BO15066 747 aa17.51■□□□□ 0.39
TNRC18-203ENST00000399537 MSH5O43196 834 aa17.51■□□□□ 0.39
TNRC18-203ENST00000399537 IFIT2P09913 472 aaKnown RBP17.51■□□□□ 0.39
TNRC18-203ENST00000399537 CT47A1Q5JQC4 288 aaPredicted RBP17.5■□□□□ 0.39
TNRC18-203ENST00000399537 NGEFQ8N5V2 710 aa17.49■□□□□ 0.39
TNRC18-203ENST00000399537 CUX1P39880 1505 aa17.49■□□□□ 0.39
TNRC18-203ENST00000399537 EVA1CP58658 441 aa17.49■□□□□ 0.39
TNRC18-203ENST00000399537 PRKRIP1Q9H875 184 aaPredicted RBP17.48■□□□□ 0.39
TNRC18-203ENST00000399537 ST20-MTHFSA0A0A6YYL1 179 aa17.48■□□□□ 0.39
TNRC18-203ENST00000399537 NOM1Q5C9Z4 860 aaKnown RBP17.48■□□□□ 0.39
TNRC18-203ENST00000399537 COG6Q9Y2V7 657 aa17.48■□□□□ 0.39
TNRC18-203ENST00000399537 EPS15P42566 896 aa17.48■□□□□ 0.39
TNRC18-203ENST00000399537 TRDNQ13061 729 aa17.47■□□□□ 0.39
TNRC18-203ENST00000399537 CDR1P51861 262 aa17.47■□□□□ 0.39
TNRC18-203ENST00000399537 ACBD3Q9H3P7 528 aa17.47■□□□□ 0.39
TNRC18-203ENST00000399537 CWC22Q9HCG8 908 aaKnown RBP17.47■□□□□ 0.39
TNRC18-203ENST00000399537 RNF20Q5VTR2 975 aa17.47■□□□□ 0.39
TNRC18-203ENST00000399537 ODF2Q5BJF6 829 aa17.47■□□□□ 0.39
TNRC18-203ENST00000399537 VPS37CA5D8V6 355 aaPredicted RBP17.46■□□□□ 0.39
TNRC18-203ENST00000399537 TRAK1Q9UPV9 953 aa17.46■□□□□ 0.39
TNRC18-203ENST00000399537 IFT57Q9NWB7 429 aa17.46■□□□□ 0.39
TNRC18-203ENST00000399537 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
TNRC18-203ENST00000399537 TEFQ10587 303 aa17.45■□□□□ 0.38
TNRC18-203ENST00000399537 FAM43AQ8N2R8 423 aa17.45■□□□□ 0.38
TNRC18-203ENST00000399537 ELL2O00472 640 aaPredicted RBP17.45■□□□□ 0.38
TNRC18-203ENST00000399537 ARGLU1Q9NWB6 273 aaPredicted RBP17.45■□□□□ 0.38
TNRC18-203ENST00000399537 EVC2Q86UK5 1308 aa17.45■□□□□ 0.38
TNRC18-203ENST00000399537 ERICH2A1L162 156 aa17.45■□□□□ 0.38
TNRC18-203ENST00000399537 CAGE1Q8TC20 777 aa17.45■□□□□ 0.38
TNRC18-203ENST00000399537 SASS6Q6UVJ0 657 aa17.44■□□□□ 0.38
TNRC18-203ENST00000399537 HNRNPMP52272 730 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■■■■ 36.5
TNRC18-203ENST00000399537 MNS1Q8NEH6 495 aa17.44■□□□□ 0.38
TNRC18-203ENST00000399537 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
TNRC18-203ENST00000399537 SAFBQ15424 915 aaKnown RBP eCLIP17.43■□□□□ 0.38
TNRC18-203ENST00000399537 CCDC73Q6ZRK6 1079 aa17.43■□□□□ 0.38
TNRC18-203ENST00000399537 CNTLNQ9NXG0 1405 aa17.42■□□□□ 0.38
TNRC18-203ENST00000399537 DDX19BQ9UMR2 479 aa17.42■□□□□ 0.38
TNRC18-203ENST00000399537 G3BP1Q13283 466 aaKnown RBP eCLIP17.42■□□□□ 0.388e-8■■□□□ 13.2
TNRC18-203ENST00000399537 NASPP49321 788 aaPredicted RBP17.42■□□□□ 0.38
TNRC18-203ENST00000399537 HSP90AB2PQ58FF8 381 aa17.42■□□□□ 0.38
TNRC18-203ENST00000399537 NAT10Q9H0A0 1025 aaKnown RBP17.41■□□□□ 0.38
TNRC18-203ENST00000399537 HSP90B2PQ58FF3 399 aa17.41■□□□□ 0.38
TNRC18-203ENST00000399537 SMC3Q9UQE7 1217 aa17.41■□□□□ 0.38
TNRC18-203ENST00000399537 MAP7D2Q96T17 732 aa17.41■□□□□ 0.38
TNRC18-203ENST00000399537 SYTL4Q96C24 671 aaPredicted RBP17.4■□□□□ 0.38
TNRC18-203ENST00000399537 CHMP5Q9NZZ3 219 aa17.4■□□□□ 0.38
TNRC18-203ENST00000399537 NINLQ9Y2I6 1382 aa17.4■□□□□ 0.38
TNRC18-203ENST00000399537 OLFM4Q6UX06 510 aa17.4■□□□□ 0.38
TNRC18-203ENST00000399537 RDXP35241 583 aaKnown RBP17.39■□□□□ 0.38
TNRC18-203ENST00000399537 SAMD1Q6SPF0 538 aaPredicted RBP17.39■□□□□ 0.38
TNRC18-203ENST00000399537 PDILTQ8N807 584 aa17.39■□□□□ 0.37
TNRC18-203ENST00000399537 BRMS1Q9HCU9 246 aa17.39■□□□□ 0.37
TNRC18-203ENST00000399537 DDX58O95786 925 aaKnown RBP17.39■□□□□ 0.37
TNRC18-203ENST00000399537 MEX3CQ5U5Q3 659 aaKnown RBP17.39■□□□□ 0.37
TNRC18-203ENST00000399537 TDRD9Q8NDG6 1382 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms