RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 ROCK2O75116 1388 aaKnown RBP27.2■■□□□ 1.95
PDLIM2-204ENST00000397760 CARD11Q9BXL7 1154 aa27.2■■□□□ 1.94
PDLIM2-204ENST00000397760 HSPA5P11021 654 aaKnown RBP27.19■■□□□ 1.94
PDLIM2-204ENST00000397760 NBPF1Q3BBV0 1214 aa27.18■■□□□ 1.94
PDLIM2-204ENST00000397760 RIMS1Q86UR5 1692 aaKnown RBP27.17■■□□□ 1.94
PDLIM2-204ENST00000397760 IFT172Q9UG01 1749 aa27.17■■□□□ 1.94
PDLIM2-204ENST00000397760 VGFO15240 615 aaPredicted RBP27.17■■□□□ 1.94
PDLIM2-204ENST00000397760 A2ML1A8K2U0 1454 aa27.17■■□□□ 1.94
PDLIM2-204ENST00000397760 TRPM1Q7Z4N2 1603 aa27.17■■□□□ 1.94
PDLIM2-204ENST00000397760 NEXMIFQ5QGS0 1516 aa27.16■■□□□ 1.94
PDLIM2-204ENST00000397760 NUTM2DQ5VT03 806 aaPredicted RBP27.16■■□□□ 1.94
PDLIM2-204ENST00000397760 NRXN1Q9ULB1 1477 aa27.15■■□□□ 1.94
PDLIM2-204ENST00000397760 NLRP1Q9C000 1473 aa27.15■■□□□ 1.94
PDLIM2-204ENST00000397760 GTF3C3Q9Y5Q9 886 aa27.14■■□□□ 1.94
PDLIM2-204ENST00000397760 PPLO60437 1756 aa27.14■■□□□ 1.94
PDLIM2-204ENST00000397760 GPRASP1Q5JY77 1395 aa27.13■■□□□ 1.93
PDLIM2-204ENST00000397760 MYO5BQ9ULV0 1848 aa27.11■■□□□ 1.93
PDLIM2-204ENST00000397760 USP47Q96K76 1375 aa27.11■■□□□ 1.93
PDLIM2-204ENST00000397760 ZFYVE9O95405 1425 aa27.1■■□□□ 1.93
PDLIM2-204ENST00000397760 CFAP70Q5T0N1 1121 aa27.1■■□□□ 1.93
PDLIM2-204ENST00000397760 PIK3C2GO75747 1445 aa27.09■■□□□ 1.93
PDLIM2-204ENST00000397760 RIMS2Q9UQ26 1411 aa27.07■■□□□ 1.92
PDLIM2-204ENST00000397760 C14orf93Q9H972 538 aaKnown RBP27.05■■□□□ 1.92
PDLIM2-204ENST00000397760 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.04■■□□□ 1.92
PDLIM2-204ENST00000397760 KDM5AP29375 1690 aaKnown RBP27.03■■□□□ 1.92
PDLIM2-204ENST00000397760 HDGFP51858 240 aaKnown RBP27.03■■□□□ 1.92
PDLIM2-204ENST00000397760 KIAA1210Q9ULL0 1709 aa27.03■■□□□ 1.92
PDLIM2-204ENST00000397760 PTPRMP28827 1452 aa27.02■■□□□ 1.92
PDLIM2-204ENST00000397760 LAMC1P11047 1609 aa27.02■■□□□ 1.92
PDLIM2-204ENST00000397760 UBR1Q8IWV7 1749 aa27.02■■□□□ 1.92
PDLIM2-204ENST00000397760 TMEM2Q9UHN6 1383 aa27.01■■□□□ 1.92
PDLIM2-204ENST00000397760 ST20-MTHFSA0A0A6YYL1 179 aa27■■□□□ 1.91
PDLIM2-204ENST00000397760 SENP3Q9H4L4 574 aaPredicted RBP26.99■■□□□ 1.91
PDLIM2-204ENST00000397760 THEMISQ8N1K5 641 aaPredicted RBP26.98■■□□□ 1.91
PDLIM2-204ENST00000397760 MYO3AQ8NEV4 1616 aa26.98■■□□□ 1.91
PDLIM2-204ENST00000397760 SCAF11Q99590 1463 aaKnown RBP26.96■■□□□ 1.91
PDLIM2-204ENST00000397760 TMEM132EQ6IEE7 984 aa26.94■■□□□ 1.9
PDLIM2-204ENST00000397760 SETBP1Q9Y6X0 1596 aa26.94■■□□□ 1.9
PDLIM2-204ENST00000397760 C11orf95C9JLR9 678 aaPredicted RBP26.93■■□□□ 1.9
PDLIM2-204ENST00000397760 CEP170BQ9Y4F5 1589 aaPredicted RBP26.92■■□□□ 1.9
PDLIM2-204ENST00000397760 EID1Q9Y6B2 187 aa26.92■■□□□ 1.9
PDLIM2-204ENST00000397760 TXNDC2Q86VQ3 553 aa26.91■■□□□ 1.9
PDLIM2-204ENST00000397760 YTHDC1Q96MU7 727 aaKnown RBP26.91■■□□□ 1.9
PDLIM2-204ENST00000397760 LTKP29376 864 aa26.9■■□□□ 1.9
PDLIM2-204ENST00000397760 WASHC2AQ641Q2 1341 aa26.9■■□□□ 1.9
PDLIM2-204ENST00000397760 ADGRB1O14514 1584 aa26.9■■□□□ 1.9
PDLIM2-204ENST00000397760 SLIT1O75093 1534 aa26.9■■□□□ 1.9
PDLIM2-204ENST00000397760 ARHGAP23Q9P227 1491 aa26.89■■□□□ 1.9
PDLIM2-204ENST00000397760 KDM4FA0A1W2PPD8 638 aa26.89■■□□□ 1.9
PDLIM2-204ENST00000397760 IQGAP1P46940 1657 aa26.88■■□□□ 1.89
PDLIM2-204ENST00000397760 SETD1BQ9UPS6 1966 aaKnown RBP26.88■■□□□ 1.89
PDLIM2-204ENST00000397760 EIF3AQ14152 1382 aaKnown RBP26.88■■□□□ 1.89
PDLIM2-204ENST00000397760 ALKQ9UM73 1620 aa26.87■■□□□ 1.89
PDLIM2-204ENST00000397760 DDX10Q13206 875 aaKnown RBP26.87■■□□□ 1.89
PDLIM2-204ENST00000397760 BCANQ96GW7 911 aa26.87■■□□□ 1.89
PDLIM2-204ENST00000397760 TRAK1Q9UPV9 953 aa26.86■■□□□ 1.89
PDLIM2-204ENST00000397760 CCDC7Q96M83 1385 aa26.86■■□□□ 1.89
PDLIM2-204ENST00000397760 TESK2Q96S53 571 aa26.85■■□□□ 1.89
PDLIM2-204ENST00000397760 KIF7Q2M1P5 1343 aa26.84■■□□□ 1.89
PDLIM2-204ENST00000397760 PLEKHG1Q9ULL1 1385 aa26.84■■□□□ 1.89
PDLIM2-204ENST00000397760 ZNF142P52746 1687 aaPredicted RBP26.83■■□□□ 1.89
PDLIM2-204ENST00000397760 ASXL1Q8IXJ9 1541 aa26.82■■□□□ 1.88
PDLIM2-204ENST00000397760 STK26Q9P289 416 aa26.8■■□□□ 1.88
PDLIM2-204ENST00000397760 NRXN3Q9Y4C0 1643 aa26.79■■□□□ 1.88
PDLIM2-204ENST00000397760 YTHDC2Q9H6S0 1430 aaKnown RBP26.78■■□□□ 1.88
PDLIM2-204ENST00000397760 TMF1P82094 1093 aa26.78■■□□□ 1.88
PDLIM2-204ENST00000397760 ANKLE2Q86XL3 938 aa26.77■■□□□ 1.88
PDLIM2-204ENST00000397760 POLR3GLQ9BT43 218 aa26.77■■□□□ 1.88
PDLIM2-204ENST00000397760 CENPJQ9HC77 1338 aaPredicted RBP26.77■■□□□ 1.88
PDLIM2-204ENST00000397760 METP08581 1390 aa26.76■■□□□ 1.87
PDLIM2-204ENST00000397760 ADAMTS13Q76LX8 1427 aa26.75■■□□□ 1.87
PDLIM2-204ENST00000397760 SLC24A1O60721 1099 aa26.74■■□□□ 1.87
PDLIM2-204ENST00000397760 DISP3Q9P2K9 1392 aa26.74■■□□□ 1.87
PDLIM2-204ENST00000397760 SLC26A8Q96RN1 970 aa26.73■■□□□ 1.87
PDLIM2-204ENST00000397760 LRPPRCP42704 1394 aaKnown RBP26.73■■□□□ 1.87
PDLIM2-204ENST00000397760 SETD1AO15047 1707 aaKnown RBP26.73■■□□□ 1.87
PDLIM2-204ENST00000397760 POLR1AO95602 1720 aaPredicted RBP26.71■■□□□ 1.87
PDLIM2-204ENST00000397760 TBX22Q9Y458 520 aa26.7■■□□□ 1.87
PDLIM2-204ENST00000397760 MED14O60244 1454 aa26.7■■□□□ 1.86
PDLIM2-204ENST00000397760 SBNO2Q9Y2G9 1366 aa26.7■■□□□ 1.86
PDLIM2-204ENST00000397760 ABCC11Q96J66 1382 aa26.69■■□□□ 1.86
PDLIM2-204ENST00000397760 CDCA8Q53HL2 280 aa26.67■■□□□ 1.86
PDLIM2-204ENST00000397760 PRAM1Q96QH2 718 aa26.67■■□□□ 1.86
PDLIM2-204ENST00000397760 POGKQ9P215 609 aa26.67■■□□□ 1.86
PDLIM2-204ENST00000397760 ARHGEF28Q8N1W1 1705 aaKnown RBP26.67■■□□□ 1.86
PDLIM2-204ENST00000397760 SAFB2Q14151 953 aaKnown RBP eCLIP26.65■■□□□ 1.86
PDLIM2-204ENST00000397760 DLC1Q96QB1 1528 aa26.64■■□□□ 1.85
PDLIM2-204ENST00000397760 DIP2AQ14689 1571 aa26.62■■□□□ 1.85
PDLIM2-204ENST00000397760 NCKAP5LQ9HCH0 1330 aa26.62■■□□□ 1.85
PDLIM2-204ENST00000397760 QRICH2Q9H0J4 1663 aa26.61■■□□□ 1.85
PDLIM2-204ENST00000397760 WAPLQ7Z5K2 1190 aa26.6■■□□□ 1.85
PDLIM2-204ENST00000397760 SIRT1Q96EB6 747 aa26.6■■□□□ 1.85
PDLIM2-204ENST00000397760 TECPR2O15040 1411 aa26.6■■□□□ 1.85
PDLIM2-204ENST00000397760 NPHP4O75161 1426 aaPredicted RBP26.59■■□□□ 1.85
PDLIM2-204ENST00000397760 PTPRUQ92729 1446 aa26.59■■□□□ 1.85
PDLIM2-204ENST00000397760 AMOTL2Q9Y2J4 779 aa26.57■■□□□ 1.84
PDLIM2-204ENST00000397760 EVC2Q86UK5 1308 aa26.57■■□□□ 1.84
PDLIM2-204ENST00000397760 MINK1Q8N4C8 1332 aaPredicted RBP26.57■■□□□ 1.84
PDLIM2-204ENST00000397760 PLEKHH1Q9ULM0 1364 aa26.57■■□□□ 1.84
PDLIM2-204ENST00000397760 HSPA2P54652 639 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 219.2 ms