RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 ZFYVE9O95405 1425 aa26.15■■□□□ 1.78
TNFSF13-205ENST00000396545 TMEM94Q12767 1356 aa26.15■■□□□ 1.78
TNFSF13-205ENST00000396545 NWD1Q149M9 1564 aa26.13■■□□□ 1.77
TNFSF13-205ENST00000396545 TMEM131LA2VDJ0 1609 aa26.12■■□□□ 1.77
TNFSF13-205ENST00000396545 MYO5BQ9ULV0 1848 aa26.12■■□□□ 1.77
TNFSF13-205ENST00000396545 ZEB1P37275 1124 aaPredicted RBP26.12■■□□□ 1.77
TNFSF13-205ENST00000396545 SENP3Q9H4L4 574 aaPredicted RBP26.12■■□□□ 1.77
TNFSF13-205ENST00000396545 RRBP1Q9P2E9 1410 aaKnown RBP26.11■■□□□ 1.77
TNFSF13-205ENST00000396545 NKTRP30414 1462 aaKnown RBP26.11■■□□□ 1.77
TNFSF13-205ENST00000396545 E9PCH4 1651 aa26.1■■□□□ 1.77
TNFSF13-205ENST00000396545 IQGAP3Q86VI3 1631 aa26.1■■□□□ 1.77
TNFSF13-205ENST00000396545 PLEKHG1Q9ULL1 1385 aa26.09■■□□□ 1.77
TNFSF13-205ENST00000396545 RIMS2Q9UQ26 1411 aa26.08■■□□□ 1.77
TNFSF13-205ENST00000396545 FAM135BQ49AJ0 1406 aa26.08■■□□□ 1.76
TNFSF13-205ENST00000396545 PROSER2Q86WR7 435 aaPredicted RBP26.07■■□□□ 1.76
TNFSF13-205ENST00000396545 BCANQ96GW7 911 aa26.04■■□□□ 1.76
TNFSF13-205ENST00000396545 RBM33Q96EV2 1170 aaKnown RBP26.03■■□□□ 1.76
TNFSF13-205ENST00000396545 PHF23Q9BUL5 403 aaPredicted RBP26.03■■□□□ 1.76
TNFSF13-205ENST00000396545 PPP1R15AO75807 674 aaPredicted RBP26.03■■□□□ 1.76
TNFSF13-205ENST00000396545 HDGFP51858 240 aaKnown RBP26.03■■□□□ 1.76
TNFSF13-205ENST00000396545 NUP155O75694 1391 aa26.01■■□□□ 1.75
TNFSF13-205ENST00000396545 CHD2O14647 1828 aaKnown RBP26■■□□□ 1.75
TNFSF13-205ENST00000396545 ITGAEP38570 1179 aa25.99■■□□□ 1.75
TNFSF13-205ENST00000396545 ROBO1Q9Y6N7 1651 aa25.99■■□□□ 1.75
TNFSF13-205ENST00000396545 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.99■■□□□ 1.75
TNFSF13-205ENST00000396545 CHGAP10645 457 aaKnown RBP25.98■■□□□ 1.75
TNFSF13-205ENST00000396545 MSH6P52701 1360 aa25.97■■□□□ 1.75
TNFSF13-205ENST00000396545 TBX22Q9Y458 520 aa25.97■■□□□ 1.75
TNFSF13-205ENST00000396545 ADAMTS13Q76LX8 1427 aa25.97■■□□□ 1.75
TNFSF13-205ENST00000396545 DIP2AQ14689 1571 aa25.94■■□□□ 1.74
TNFSF13-205ENST00000396545 NUTM2DQ5VT03 806 aaPredicted RBP25.92■■□□□ 1.74
TNFSF13-205ENST00000396545 NCOA3Q9Y6Q9 1424 aa25.9■■□□□ 1.74
TNFSF13-205ENST00000396545 PIK3R4Q99570 1358 aa25.9■■□□□ 1.74
TNFSF13-205ENST00000396545 SLAIN2Q9P270 581 aa25.9■■□□□ 1.74
TNFSF13-205ENST00000396545 RGS17Q9UGC6 210 aaPredicted RBP25.88■■□□□ 1.73
TNFSF13-205ENST00000396545 SPHKAPQ2M3C7 1700 aa25.88■■□□□ 1.73
TNFSF13-205ENST00000396545 TRPM2O94759 1503 aa25.85■■□□□ 1.73
TNFSF13-205ENST00000396545 CCER1Q8TC90 406 aaPredicted RBP25.83■■□□□ 1.73
TNFSF13-205ENST00000396545 PHLPP1O60346 1717 aa25.82■■□□□ 1.72
TNFSF13-205ENST00000396545 PTPRUQ92729 1446 aa25.81■■□□□ 1.72
TNFSF13-205ENST00000396545 NRXN3Q9Y4C0 1643 aa25.81■■□□□ 1.72
TNFSF13-205ENST00000396545 SETBP1Q9Y6X0 1596 aa25.81■■□□□ 1.72
TNFSF13-205ENST00000396545 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.8■■□□□ 1.72
TNFSF13-205ENST00000396545 NAIPQ13075 1403 aa25.8■■□□□ 1.72
TNFSF13-205ENST00000396545 C14orf37Q86TY3 774 aa25.79■■□□□ 1.72
TNFSF13-205ENST00000396545 C19orf44Q9H6X5 657 aa25.78■■□□□ 1.72
TNFSF13-205ENST00000396545 AMOTL2Q9Y2J4 779 aa25.78■■□□□ 1.72
TNFSF13-205ENST00000396545 COL16A1Q07092 1604 aaPredicted RBP25.78■■□□□ 1.72
TNFSF13-205ENST00000396545 CLTCL1P53675 1640 aa25.77■■□□□ 1.72
TNFSF13-205ENST00000396545 CADPS2Q86UW7 1296 aa25.77■■□□□ 1.72
TNFSF13-205ENST00000396545 XRN1Q8IZH2 1706 aaKnown RBP25.76■■□□□ 1.72
TNFSF13-205ENST00000396545 JCADQ9P266 1359 aa25.76■■□□□ 1.71
TNFSF13-205ENST00000396545 ATF3P18847 181 aa25.73■■□□□ 1.71
TNFSF13-205ENST00000396545 ZNF326Q5BKZ1 582 aaKnown RBP25.73■■□□□ 1.71
TNFSF13-205ENST00000396545 NEXMIFQ5QGS0 1516 aa25.73■■□□□ 1.71
TNFSF13-205ENST00000396545 AHDC1Q5TGY3 1603 aaPredicted RBP25.72■■□□□ 1.71
TNFSF13-205ENST00000396545 DCCP43146 1447 aa25.71■■□□□ 1.71
TNFSF13-205ENST00000396545 POTEAQ6S8J7 498 aa25.71■■□□□ 1.71
TNFSF13-205ENST00000396545 METP08581 1390 aa25.71■■□□□ 1.71
TNFSF13-205ENST00000396545 HFM1A2PYH4 1435 aa25.7■■□□□ 1.7
TNFSF13-205ENST00000396545 KIF1BO60333 1816 aa25.67■■□□□ 1.7
TNFSF13-205ENST00000396545 BRINP3Q76B58 766 aa25.65■■□□□ 1.7
TNFSF13-205ENST00000396545 SPATA31A6Q5VVP1 1343 aa25.64■■□□□ 1.69
TNFSF13-205ENST00000396545 LRP6O75581 1613 aa25.64■■□□□ 1.69
TNFSF13-205ENST00000396545 SHPRHQ149N8 1683 aa25.63■■□□□ 1.69
TNFSF13-205ENST00000396545 MST1RQ04912 1400 aa25.62■■□□□ 1.69
TNFSF13-205ENST00000396545 ASXL1Q8IXJ9 1541 aa25.61■■□□□ 1.69
TNFSF13-205ENST00000396545 TRIM52Q96A61 297 aa25.61■■□□□ 1.69
TNFSF13-205ENST00000396545 ADGRL3Q9HAR2 1447 aa25.6■■□□□ 1.69
TNFSF13-205ENST00000396545 SETD1AO15047 1707 aaKnown RBP25.57■■□□□ 1.68
TNFSF13-205ENST00000396545 NALCNQ8IZF0 1738 aa25.57■■□□□ 1.68
TNFSF13-205ENST00000396545 SLC4A1APQ9BWU0 796 aaKnown RBP25.57■■□□□ 1.68
TNFSF13-205ENST00000396545 NHSL1Q5SYE7 1610 aa25.56■■□□□ 1.68
TNFSF13-205ENST00000396545 PTCH1Q13635 1447 aa25.55■■□□□ 1.68
TNFSF13-205ENST00000396545 VGFO15240 615 aaPredicted RBP25.55■■□□□ 1.68
TNFSF13-205ENST00000396545 SETD5Q9C0A6 1442 aa25.55■■□□□ 1.68
TNFSF13-205ENST00000396545 RPGRIP1LQ68CZ1 1315 aa25.53■■□□□ 1.68
TNFSF13-205ENST00000396545 PRAG1Q86YV5 1406 aa25.52■■□□□ 1.68
TNFSF13-205ENST00000396545 MEX3CQ5U5Q3 659 aaKnown RBP25.52■■□□□ 1.68
TNFSF13-205ENST00000396545 PPLO60437 1756 aa25.51■■□□□ 1.67
TNFSF13-205ENST00000396545 ROBO2Q9HCK4 1378 aa25.5■■□□□ 1.67
TNFSF13-205ENST00000396545 DHX57Q6P158 1386 aaKnown RBP25.48■■□□□ 1.67
TNFSF13-205ENST00000396545 CLSPNQ9HAW4 1339 aa25.48■■□□□ 1.67
TNFSF13-205ENST00000396545 ZNF772Q68DY9 489 aaPredicted RBP25.48■■□□□ 1.67
TNFSF13-205ENST00000396545 ACIN1Q9UKV3 1341 aaKnown RBP25.47■■□□□ 1.67
TNFSF13-205ENST00000396545 C1orf167Q5SNV9 1468 aa25.46■■□□□ 1.67
TNFSF13-205ENST00000396545 RAB3GAP2Q9H2M9 1393 aa25.45■■□□□ 1.67
TNFSF13-205ENST00000396545 FOXD1Q16676 465 aa25.45■■□□□ 1.66
TNFSF13-205ENST00000396545 LRRC59Q96AG4 307 aaKnown RBP25.45■■□□□ 1.66
TNFSF13-205ENST00000396545 DDX17Q92841 729 aaKnown RBP25.44■■□□□ 1.66
TNFSF13-205ENST00000396545 NUTM2BA6NNL0 878 aaPredicted RBP25.44■■□□□ 1.66
TNFSF13-205ENST00000396545 NUTM2EB1AL46 878 aaPredicted RBP25.44■■□□□ 1.66
TNFSF13-205ENST00000396545 NUTM2AQ8IVF1 878 aaPredicted RBP25.44■■□□□ 1.66
TNFSF13-205ENST00000396545 LAMC1P11047 1609 aa25.43■■□□□ 1.66
TNFSF13-205ENST00000396545 CCDC144AA2RUR9 1427 aa25.42■■□□□ 1.66
TNFSF13-205ENST00000396545 PNPLA6Q8IY17 1366 aa25.42■■□□□ 1.66
TNFSF13-205ENST00000396545 SPATA31E1Q6ZUB1 1445 aa25.41■■□□□ 1.66
TNFSF13-205ENST00000396545 ADGRF5Q8IZF2 1346 aa25.37■■□□□ 1.65
TNFSF13-205ENST00000396545 MPHOSPH9Q99550 1183 aa25.37■■□□□ 1.65
TNFSF13-205ENST00000396545 AFF2P51816 1311 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms