RNA–Protein interactions for RNA: ENST00000396183.7

CTNNB1-202, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-202ENST00000396183 FRAT1Q92837 279 aaPredicted RBP18.39■□□□□ 0.53
CTNNB1-202ENST00000396183 ABCC1P33527 1531 aa18.39■□□□□ 0.53
CTNNB1-202ENST00000396183 BCL2L13Q9BXK5 485 aa18.39■□□□□ 0.53
CTNNB1-202ENST00000396183 CLASP1Q7Z460 1538 aa18.39■□□□□ 0.53
CTNNB1-202ENST00000396183 GGNBP2Q9H3C7 697 aa18.38■□□□□ 0.53
CTNNB1-202ENST00000396183 CARD14Q9BXL6 1004 aa18.38■□□□□ 0.53
CTNNB1-202ENST00000396183 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
CTNNB1-202ENST00000396183 ATP10AO60312 1499 aa18.37■□□□□ 0.53
CTNNB1-202ENST00000396183 KDM5DQ9BY66 1539 aa18.37■□□□□ 0.53
CTNNB1-202ENST00000396183 SHROOM2Q13796 1616 aa18.36■□□□□ 0.53
CTNNB1-202ENST00000396183 ATP7AQ04656 1500 aa18.36■□□□□ 0.53
CTNNB1-202ENST00000396183 EIF3AQ14152 1382 aaKnown RBP18.36■□□□□ 0.53
CTNNB1-202ENST00000396183 TRHP20396 242 aaPredicted RBP18.36■□□□□ 0.53
CTNNB1-202ENST00000396183 C20orf194Q5TEA3 1177 aa18.36■□□□□ 0.53
CTNNB1-202ENST00000396183 AMER1Q5JTC6 1135 aaPredicted RBP18.36■□□□□ 0.53
CTNNB1-202ENST00000396183 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
CTNNB1-202ENST00000396183 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
CTNNB1-202ENST00000396183 VGFO15240 615 aaPredicted RBP18.34■□□□□ 0.53
CTNNB1-202ENST00000396183 CRBNQ96SW2 442 aa18.34■□□□□ 0.53
CTNNB1-202ENST00000396183 PRAM1Q96QH2 718 aa18.34■□□□□ 0.53
CTNNB1-202ENST00000396183 UHRF1BP1LA0JNW5 1464 aa18.33■□□□□ 0.53
CTNNB1-202ENST00000396183 MAST1Q9Y2H9 1570 aa18.33■□□□□ 0.52
CTNNB1-202ENST00000396183 WAPLQ7Z5K2 1190 aa18.33■□□□□ 0.52
CTNNB1-202ENST00000396183 MTHFSP49914 203 aa18.32■□□□□ 0.52
CTNNB1-202ENST00000396183 RGS3P49796 1198 aa18.31■□□□□ 0.52
CTNNB1-202ENST00000396183 GOLGA2Q08379 1002 aa18.31■□□□□ 0.52
CTNNB1-202ENST00000396183 NBR1Q14596 966 aa18.31■□□□□ 0.52
CTNNB1-202ENST00000396183 PARD3Q8TEW0 1356 aa18.3■□□□□ 0.52
CTNNB1-202ENST00000396183 CLUAP1Q96AJ1 413 aa18.3■□□□□ 0.52
CTNNB1-202ENST00000396183 LAS1LQ9Y4W2 734 aaKnown RBP18.3■□□□□ 0.52
CTNNB1-202ENST00000396183 ZFYVE16Q7Z3T8 1539 aa18.3■□□□□ 0.52
CTNNB1-202ENST00000396183 YEATS2Q9ULM3 1422 aa18.29■□□□□ 0.52
CTNNB1-202ENST00000396183 RTEL1-TNFRSF6BF6WH68 1400 aa18.28■□□□□ 0.52
CTNNB1-202ENST00000396183 SMG6Q86US8 1419 aaKnown RBP18.28■□□□□ 0.52
CTNNB1-202ENST00000396183 ZNF518AQ6AHZ1 1483 aa18.28■□□□□ 0.52
CTNNB1-202ENST00000396183 MAGI2Q86UL8 1455 aa18.28■□□□□ 0.52
CTNNB1-202ENST00000396183 SCAF11Q99590 1463 aaKnown RBP18.28■□□□□ 0.52
CTNNB1-202ENST00000396183 COL17A1Q9UMD9 1497 aaPredicted RBP18.27■□□□□ 0.52
CTNNB1-202ENST00000396183 BCAR3O75815 825 aa18.27■□□□□ 0.52
CTNNB1-202ENST00000396183 CEBPAP49715 358 aaPredicted RBP18.27■□□□□ 0.52
CTNNB1-202ENST00000396183 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
CTNNB1-202ENST00000396183 GPRASP1Q5JY77 1395 aa18.27■□□□□ 0.51
CTNNB1-202ENST00000396183 NPATQ14207 1427 aa18.26■□□□□ 0.51
CTNNB1-202ENST00000396183 DMRT2Q9Y5R5 561 aa18.26■□□□□ 0.51
CTNNB1-202ENST00000396183 TXNDC2Q86VQ3 553 aa18.25■□□□□ 0.51
CTNNB1-202ENST00000396183 C14orf93Q9H972 538 aaKnown RBP18.25■□□□□ 0.51
CTNNB1-202ENST00000396183 EVC2Q86UK5 1308 aa18.24■□□□□ 0.51
CTNNB1-202ENST00000396183 NSD3Q9BZ95 1437 aa18.24■□□□□ 0.51
CTNNB1-202ENST00000396183 CABP1Q9NZU7 370 aa18.23■□□□□ 0.51
CTNNB1-202ENST00000396183 PRDM15P57071 1507 aaPredicted RBP18.23■□□□□ 0.51
CTNNB1-202ENST00000396183 CFAP53Q96M91 514 aa18.22■□□□□ 0.51
CTNNB1-202ENST00000396183 NCKAP5LQ9HCH0 1330 aa18.22■□□□□ 0.51
CTNNB1-202ENST00000396183 MSH5O43196 834 aa18.21■□□□□ 0.51
CTNNB1-202ENST00000396183 IQGAP3Q86VI3 1631 aa18.21■□□□□ 0.51
CTNNB1-202ENST00000396183 SLC24A1O60721 1099 aa18.21■□□□□ 0.51
CTNNB1-202ENST00000396183 PLEKHH1Q9ULM0 1364 aa18.21■□□□□ 0.5
CTNNB1-202ENST00000396183 PLXNC1O60486 1568 aa18.2■□□□□ 0.5
CTNNB1-202ENST00000396183 E9PCH4 1651 aa18.2■□□□□ 0.5
CTNNB1-202ENST00000396183 UNC13BO14795 1591 aa18.2■□□□□ 0.5
CTNNB1-202ENST00000396183 LRPPRCP42704 1394 aaKnown RBP18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 POGZQ7Z3K3 1410 aa18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 CLTCL1P53675 1640 aa18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 TCP11L2Q8N4U5 519 aa18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 CGNL1Q0VF96 1302 aa18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 TRPM1Q7Z4N2 1603 aa18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 TCERG1O14776 1098 aaKnown RBP18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 ANP32AP39687 249 aaKnown RBP18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 PDE3BQ13370 1112 aa18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 ANP32EQ9BTT0 268 aa18.19■□□□□ 0.5
CTNNB1-202ENST00000396183 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
CTNNB1-202ENST00000396183 ELL2O00472 640 aaPredicted RBP18.17■□□□□ 0.5
CTNNB1-202ENST00000396183 ERICH6BQ5W0A0 696 aa18.17■□□□□ 0.5
CTNNB1-202ENST00000396183 PANK1Q8TE04 598 aa18.17■□□□□ 0.5
CTNNB1-202ENST00000396183 CDK19Q9BWU1 502 aa18.17■□□□□ 0.5
CTNNB1-202ENST00000396183 COG6Q9Y2V7 657 aa18.17■□□□□ 0.5
CTNNB1-202ENST00000396183 HMOX1P09601 288 aa18.17■□□□□ 0.5
CTNNB1-202ENST00000396183 RBM33Q96EV2 1170 aaKnown RBP18.17■□□□□ 0.5
CTNNB1-202ENST00000396183 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
CTNNB1-202ENST00000396183 ZBTB7CA1YPR0 619 aa18.16■□□□□ 0.5
CTNNB1-202ENST00000396183 TSR2Q969E8 191 aaKnown RBP18.16■□□□□ 0.5
CTNNB1-202ENST00000396183 PTPRTO14522 1441 aa18.16■□□□□ 0.5
CTNNB1-202ENST00000396183 C14orf37Q86TY3 774 aa18.15■□□□□ 0.5
CTNNB1-202ENST00000396183 SLC52A1Q9NWF4 448 aa18.15■□□□□ 0.5
CTNNB1-202ENST00000396183 DUSP27Q5VZP5 1158 aa18.15■□□□□ 0.5
CTNNB1-202ENST00000396183 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.14■□□□□ 0.49
CTNNB1-202ENST00000396183 ZRANB1Q9UGI0 708 aa18.13■□□□□ 0.49
CTNNB1-202ENST00000396183 MAPK8IP3Q9UPT6 1336 aa18.13■□□□□ 0.49
CTNNB1-202ENST00000396183 HDGFL2Q7Z4V5 671 aaPredicted RBP18.13■□□□□ 0.49
CTNNB1-202ENST00000396183 TSPOAP1O95153 1857 aa18.12■□□□□ 0.49
CTNNB1-202ENST00000396183 TRPM2O94759 1503 aa18.12■□□□□ 0.49
CTNNB1-202ENST00000396183 TERF2IPQ9NYB0 399 aa18.12■□□□□ 0.49
CTNNB1-202ENST00000396183 TNNQ9UQP3 1299 aa18.11■□□□□ 0.49
CTNNB1-202ENST00000396183 NEFMP07197 916 aa18.1■□□□□ 0.49
CTNNB1-202ENST00000396183 SLC4A3P48751 1232 aa18.1■□□□□ 0.49
CTNNB1-202ENST00000396183 WWC1Q8IX03 1113 aa18.09■□□□□ 0.49
CTNNB1-202ENST00000396183 THUMPD2Q9BTF0 503 aaKnown RBP18.09■□□□□ 0.49
CTNNB1-202ENST00000396183 PAK3O75914 559 aaPredicted RBP18.08■□□□□ 0.49
CTNNB1-202ENST00000396183 SLFN5Q08AF3 891 aa18.08■□□□□ 0.49
CTNNB1-202ENST00000396183 RRS1Q15050 365 aaKnown RBP18.08■□□□□ 0.49
CTNNB1-202ENST00000396183 NUTM2GQ5VZR2 741 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms