RNA–Protein interactions for RNA: ENST00000396039.1

PARD6B-202, Transcript of par-6 family cell polarity regulator beta, humanhuman

TSL 1 (best) BASIC

Gene PARD6B, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD6B-202ENST00000396039 TMEM131LA2VDJ0 1609 aa33.93■■■■□ 3.02
PARD6B-202ENST00000396039 E9PCH4 1651 aa33.92■■■■□ 3.02
PARD6B-202ENST00000396039 ZFYVE9O95405 1425 aa33.91■■■■□ 3.02
PARD6B-202ENST00000396039 TMEM94Q12767 1356 aa33.9■■■■□ 3.02
PARD6B-202ENST00000396039 SLC26A8Q96RN1 970 aa33.89■■■■□ 3.02
PARD6B-202ENST00000396039 PLEKHG1Q9ULL1 1385 aa33.88■■■■□ 3.01
PARD6B-202ENST00000396039 BCANQ96GW7 911 aa33.88■■■■□ 3.01
PARD6B-202ENST00000396039 PHF23Q9BUL5 403 aaPredicted RBP33.88■■■■□ 3.01
PARD6B-202ENST00000396039 FAM135BQ49AJ0 1406 aa33.87■■■■□ 3.01
PARD6B-202ENST00000396039 RIMS2Q9UQ26 1411 aa33.86■■■■□ 3.01
PARD6B-202ENST00000396039 CHD2O14647 1828 aaKnown RBP33.86■■■■□ 3.01
PARD6B-202ENST00000396039 PPP1R15AO75807 674 aaPredicted RBP33.85■■■■□ 3.01
PARD6B-202ENST00000396039 PROSER2Q86WR7 435 aaPredicted RBP33.85■■■■□ 3.01
PARD6B-202ENST00000396039 ABCF1Q8NE71 845 aaKnown RBP eCLIP33.83■■■■□ 3.01
PARD6B-202ENST00000396039 DIP2AQ14689 1571 aa33.8■■■■□ 3
PARD6B-202ENST00000396039 SENP3Q9H4L4 574 aaPredicted RBP33.79■■■■□ 3
PARD6B-202ENST00000396039 ROBO1Q9Y6N7 1651 aa33.79■■■■□ 3
PARD6B-202ENST00000396039 MSH6P52701 1360 aa33.78■■■■□ 3
PARD6B-202ENST00000396039 NUP155O75694 1391 aa33.77■■■■□ 3
PARD6B-202ENST00000396039 CHGAP10645 457 aaKnown RBP33.74■■■□□ 2.99
PARD6B-202ENST00000396039 TBX22Q9Y458 520 aa33.73■■■□□ 2.99
PARD6B-202ENST00000396039 NCOA3Q9Y6Q9 1424 aa33.71■■■□□ 2.99
PARD6B-202ENST00000396039 SPHKAPQ2M3C7 1700 aa33.71■■■□□ 2.99
PARD6B-202ENST00000396039 ITGAEP38570 1179 aa33.71■■■□□ 2.99
PARD6B-202ENST00000396039 PIK3R4Q99570 1358 aa33.7■■■□□ 2.98
PARD6B-202ENST00000396039 TRPM2O94759 1503 aa33.65■■■□□ 2.98
PARD6B-202ENST00000396039 ADAMTS13Q76LX8 1427 aa33.64■■■□□ 2.98
PARD6B-202ENST00000396039 RBM33Q96EV2 1170 aaKnown RBP33.64■■■□□ 2.98
PARD6B-202ENST00000396039 PHLPP1O60346 1717 aa33.62■■■□□ 2.97
PARD6B-202ENST00000396039 SLAIN2Q9P270 581 aa33.6■■■□□ 2.97
PARD6B-202ENST00000396039 RRBP1Q9P2E9 1410 aaKnown RBP33.59■■■□□ 2.97
PARD6B-202ENST00000396039 PPARGC1BQ86YN6 1023 aaKnown RBP33.56■■■□□ 2.96
PARD6B-202ENST00000396039 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.54■■■□□ 2.96
PARD6B-202ENST00000396039 NUTM2DQ5VT03 806 aaPredicted RBP33.54■■■□□ 2.96
PARD6B-202ENST00000396039 C14orf37Q86TY3 774 aa33.54■■■□□ 2.96
PARD6B-202ENST00000396039 SETBP1Q9Y6X0 1596 aa33.54■■■□□ 2.96
PARD6B-202ENST00000396039 CADPS2Q86UW7 1296 aa33.51■■■□□ 2.95
PARD6B-202ENST00000396039 KIF1BO60333 1816 aa33.51■■■□□ 2.95
PARD6B-202ENST00000396039 NRXN3Q9Y4C0 1643 aa33.5■■■□□ 2.95
PARD6B-202ENST00000396039 C19orf44Q9H6X5 657 aa33.49■■■□□ 2.95
PARD6B-202ENST00000396039 JCADQ9P266 1359 aa33.48■■■□□ 2.95
PARD6B-202ENST00000396039 XRN1Q8IZH2 1706 aaKnown RBP33.48■■■□□ 2.95
PARD6B-202ENST00000396039 ATF3P18847 181 aa33.47■■■□□ 2.95
PARD6B-202ENST00000396039 CLTCL1P53675 1640 aa33.46■■■□□ 2.95
PARD6B-202ENST00000396039 COL16A1Q07092 1604 aaPredicted RBP33.46■■■□□ 2.95
PARD6B-202ENST00000396039 ZNF326Q5BKZ1 582 aaKnown RBP33.46■■■□□ 2.95
PARD6B-202ENST00000396039 DCCP43146 1447 aa33.45■■■□□ 2.95
PARD6B-202ENST00000396039 NAIPQ13075 1403 aa33.45■■■□□ 2.95
PARD6B-202ENST00000396039 AMOTL2Q9Y2J4 779 aa33.45■■■□□ 2.95
PARD6B-202ENST00000396039 RGS17Q9UGC6 210 aaPredicted RBP33.44■■■□□ 2.94
PARD6B-202ENST00000396039 AHDC1Q5TGY3 1603 aaPredicted RBP33.43■■■□□ 2.94
PARD6B-202ENST00000396039 PTPRUQ92729 1446 aa33.42■■■□□ 2.94
PARD6B-202ENST00000396039 NEXMIFQ5QGS0 1516 aa33.41■■■□□ 2.94
PARD6B-202ENST00000396039 HFM1A2PYH4 1435 aa33.38■■■□□ 2.93
PARD6B-202ENST00000396039 SHPRHQ149N8 1683 aa33.36■■■□□ 2.93
PARD6B-202ENST00000396039 SPATA31A6Q5VVP1 1343 aa33.34■■■□□ 2.93
PARD6B-202ENST00000396039 METP08581 1390 aa33.29■■■□□ 2.92
PARD6B-202ENST00000396039 TRIM52Q96A61 297 aa33.28■■■□□ 2.92
PARD6B-202ENST00000396039 POTEAQ6S8J7 498 aa33.26■■■□□ 2.91
PARD6B-202ENST00000396039 ADGRL3Q9HAR2 1447 aa33.26■■■□□ 2.91
PARD6B-202ENST00000396039 ASXL1Q8IXJ9 1541 aa33.25■■■□□ 2.91
PARD6B-202ENST00000396039 VGFO15240 615 aaPredicted RBP33.25■■■□□ 2.91
PARD6B-202ENST00000396039 BRINP3Q76B58 766 aa33.25■■■□□ 2.91
PARD6B-202ENST00000396039 NHSL1Q5SYE7 1610 aa33.24■■■□□ 2.91
PARD6B-202ENST00000396039 NALCNQ8IZF0 1738 aa33.23■■■□□ 2.91
PARD6B-202ENST00000396039 MST1RQ04912 1400 aa33.23■■■□□ 2.91
PARD6B-202ENST00000396039 RPGRIP1LQ68CZ1 1315 aa33.23■■■□□ 2.91
PARD6B-202ENST00000396039 SETD1AO15047 1707 aaKnown RBP33.22■■■□□ 2.91
PARD6B-202ENST00000396039 SLC4A1APQ9BWU0 796 aaKnown RBP33.22■■■□□ 2.91
PARD6B-202ENST00000396039 PPLO60437 1756 aa33.21■■■□□ 2.91
PARD6B-202ENST00000396039 PTCH1Q13635 1447 aa33.2■■■□□ 2.91
PARD6B-202ENST00000396039 MEX3CQ5U5Q3 659 aaKnown RBP33.2■■■□□ 2.91
PARD6B-202ENST00000396039 LRP6O75581 1613 aa33.2■■■□□ 2.9
PARD6B-202ENST00000396039 ZNF772Q68DY9 489 aaPredicted RBP33.16■■■□□ 2.9
PARD6B-202ENST00000396039 PRAG1Q86YV5 1406 aa33.16■■■□□ 2.9
PARD6B-202ENST00000396039 SETD5Q9C0A6 1442 aa33.16■■■□□ 2.9
PARD6B-202ENST00000396039 LRRC59Q96AG4 307 aaKnown RBP33.09■■■□□ 2.89
PARD6B-202ENST00000396039 LAMC1P11047 1609 aa33.07■■■□□ 2.88
PARD6B-202ENST00000396039 CCDC144AA2RUR9 1427 aa33.07■■■□□ 2.88
PARD6B-202ENST00000396039 ACIN1Q9UKV3 1341 aaKnown RBP33.06■■■□□ 2.88
PARD6B-202ENST00000396039 C1orf167Q5SNV9 1468 aa33.04■■■□□ 2.88
PARD6B-202ENST00000396039 ROBO2Q9HCK4 1378 aa33.03■■■□□ 2.88
PARD6B-202ENST00000396039 IFT172Q9UG01 1749 aa33.01■■■□□ 2.87
PARD6B-202ENST00000396039 NUTM2BA6NNL0 878 aaPredicted RBP32.99■■■□□ 2.87
PARD6B-202ENST00000396039 NUTM2EB1AL46 878 aaPredicted RBP32.99■■■□□ 2.87
PARD6B-202ENST00000396039 NUTM2AQ8IVF1 878 aaPredicted RBP32.99■■■□□ 2.87
PARD6B-202ENST00000396039 ANKRD30BQ9BXX2 1392 aa32.97■■■□□ 2.87
PARD6B-202ENST00000396039 PNPLA6Q8IY17 1366 aa32.96■■■□□ 2.87
PARD6B-202ENST00000396039 CDC42BPGQ6DT37 1551 aa32.96■■■□□ 2.87
PARD6B-202ENST00000396039 CDK12Q9NYV4 1490 aaPredicted RBP32.95■■■□□ 2.87
PARD6B-202ENST00000396039 SPATA31E1Q6ZUB1 1445 aa32.94■■■□□ 2.86
PARD6B-202ENST00000396039 MPHOSPH9Q99550 1183 aa32.93■■■□□ 2.86
PARD6B-202ENST00000396039 KNDC1Q76NI1 1749 aa32.92■■■□□ 2.86
PARD6B-202ENST00000396039 RXRBP28702 533 aa32.92■■■□□ 2.86
PARD6B-202ENST00000396039 FOXD1Q16676 465 aa32.92■■■□□ 2.86
PARD6B-202ENST00000396039 AFF2P51816 1311 aa32.91■■■□□ 2.86
PARD6B-202ENST00000396039 TECPR2O15040 1411 aa32.89■■■□□ 2.86
PARD6B-202ENST00000396039 DDX17Q92841 729 aaKnown RBP32.89■■■□□ 2.86
PARD6B-202ENST00000396039 SOS2Q07890 1332 aaPredicted RBP32.88■■■□□ 2.85
PARD6B-202ENST00000396039 ADGRF5Q8IZF2 1346 aa32.86■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms