RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 RBM33Q96EV2 1170 aaKnown RBP29.62■■■□□ 2.33
COL11A2-204ENST00000395194 TMEM94Q12767 1356 aa29.62■■■□□ 2.33
COL11A2-204ENST00000395194 TMEM131LA2VDJ0 1609 aa29.6■■■□□ 2.33
COL11A2-204ENST00000395194 KCNA6P17658 529 aa29.59■■■□□ 2.33
COL11A2-204ENST00000395194 ROCK1Q13464 1354 aa29.58■■■□□ 2.33
COL11A2-204ENST00000395194 IQGAP3Q86VI3 1631 aa29.58■■■□□ 2.33
COL11A2-204ENST00000395194 NWD1Q149M9 1564 aa29.57■■■□□ 2.32
COL11A2-204ENST00000395194 ZFYVE9O95405 1425 aa29.57■■■□□ 2.32
COL11A2-204ENST00000395194 RIMS2Q9UQ26 1411 aa29.57■■■□□ 2.32
COL11A2-204ENST00000395194 CHGAP10645 457 aaKnown RBP29.57■■■□□ 2.32
COL11A2-204ENST00000395194 PROSER2Q86WR7 435 aaPredicted RBP29.57■■■□□ 2.32
COL11A2-204ENST00000395194 PHF23Q9BUL5 403 aaPredicted RBP29.56■■■□□ 2.32
COL11A2-204ENST00000395194 PPP1R15AO75807 674 aaPredicted RBP29.55■■■□□ 2.32
COL11A2-204ENST00000395194 NKTRP30414 1462 aaKnown RBP29.52■■■□□ 2.32
COL11A2-204ENST00000395194 CHD2O14647 1828 aaKnown RBP29.52■■■□□ 2.32
COL11A2-204ENST00000395194 PLEKHG1Q9ULL1 1385 aa29.52■■■□□ 2.32
COL11A2-204ENST00000395194 NUTM2DQ5VT03 806 aaPredicted RBP29.51■■■□□ 2.31
COL11A2-204ENST00000395194 NUP155O75694 1391 aa29.51■■■□□ 2.31
COL11A2-204ENST00000395194 ROBO1Q9Y6N7 1651 aa29.5■■■□□ 2.31
COL11A2-204ENST00000395194 FAM135BQ49AJ0 1406 aa29.45■■■□□ 2.31
COL11A2-204ENST00000395194 HDGFP51858 240 aaKnown RBP29.44■■■□□ 2.3
COL11A2-204ENST00000395194 MSH6P52701 1360 aa29.42■■■□□ 2.3
COL11A2-204ENST00000395194 SPHKAPQ2M3C7 1700 aa29.4■■■□□ 2.3
COL11A2-204ENST00000395194 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.4■■■□□ 2.3
COL11A2-204ENST00000395194 ADAMTS13Q76LX8 1427 aa29.38■■■□□ 2.29
COL11A2-204ENST00000395194 TBX22Q9Y458 520 aa29.36■■■□□ 2.29
COL11A2-204ENST00000395194 DIP2AQ14689 1571 aa29.35■■■□□ 2.29
COL11A2-204ENST00000395194 PHLPP1O60346 1717 aa29.34■■■□□ 2.29
COL11A2-204ENST00000395194 C14orf37Q86TY3 774 aa29.32■■■□□ 2.28
COL11A2-204ENST00000395194 SLAIN2Q9P270 581 aa29.31■■■□□ 2.28
COL11A2-204ENST00000395194 RGS17Q9UGC6 210 aaPredicted RBP29.29■■■□□ 2.28
COL11A2-204ENST00000395194 TRPM2O94759 1503 aa29.29■■■□□ 2.28
COL11A2-204ENST00000395194 RRBP1Q9P2E9 1410 aaKnown RBP29.28■■■□□ 2.28
COL11A2-204ENST00000395194 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.28■■■□□ 2.28
COL11A2-204ENST00000395194 NRXN3Q9Y4C0 1643 aa29.27■■■□□ 2.28
COL11A2-204ENST00000395194 ZNF326Q5BKZ1 582 aaKnown RBP29.26■■■□□ 2.27
COL11A2-204ENST00000395194 CLTCL1P53675 1640 aa29.26■■■□□ 2.27
COL11A2-204ENST00000395194 PTPRUQ92729 1446 aa29.25■■■□□ 2.27
COL11A2-204ENST00000395194 PIK3R4Q99570 1358 aa29.25■■■□□ 2.27
COL11A2-204ENST00000395194 NAIPQ13075 1403 aa29.22■■■□□ 2.27
COL11A2-204ENST00000395194 AMOTL2Q9Y2J4 779 aa29.22■■■□□ 2.27
COL11A2-204ENST00000395194 NCOA3Q9Y6Q9 1424 aa29.21■■■□□ 2.27
COL11A2-204ENST00000395194 COL16A1Q07092 1604 aaPredicted RBP29.2■■■□□ 2.27
COL11A2-204ENST00000395194 KIF1BO60333 1816 aa29.2■■■□□ 2.27
COL11A2-204ENST00000395194 SETBP1Q9Y6X0 1596 aa29.2■■■□□ 2.26
COL11A2-204ENST00000395194 XRN1Q8IZH2 1706 aaKnown RBP29.19■■■□□ 2.26
COL11A2-204ENST00000395194 ATF3P18847 181 aa29.17■■■□□ 2.26
COL11A2-204ENST00000395194 C19orf44Q9H6X5 657 aa29.16■■■□□ 2.26
COL11A2-204ENST00000395194 NEXMIFQ5QGS0 1516 aa29.15■■■□□ 2.26
COL11A2-204ENST00000395194 JCADQ9P266 1359 aa29.15■■■□□ 2.26
COL11A2-204ENST00000395194 CADPS2Q86UW7 1296 aa29.15■■■□□ 2.26
COL11A2-204ENST00000395194 POTEAQ6S8J7 498 aa29.14■■■□□ 2.26
COL11A2-204ENST00000395194 TRIM52Q96A61 297 aa29.13■■■□□ 2.25
COL11A2-204ENST00000395194 METP08581 1390 aa29.12■■■□□ 2.25
COL11A2-204ENST00000395194 AHDC1Q5TGY3 1603 aaPredicted RBP29.1■■■□□ 2.25
COL11A2-204ENST00000395194 HFM1A2PYH4 1435 aa29.07■■■□□ 2.24
COL11A2-204ENST00000395194 LRP6O75581 1613 aa29.05■■■□□ 2.24
COL11A2-204ENST00000395194 BRINP3Q76B58 766 aa29.05■■■□□ 2.24
COL11A2-204ENST00000395194 NALCNQ8IZF0 1738 aa29.05■■■□□ 2.24
COL11A2-204ENST00000395194 SETD1AO15047 1707 aaKnown RBP29.04■■■□□ 2.24
COL11A2-204ENST00000395194 SHPRHQ149N8 1683 aa29.04■■■□□ 2.24
COL11A2-204ENST00000395194 DCCP43146 1447 aa29.03■■■□□ 2.24
COL11A2-204ENST00000395194 SLC4A1APQ9BWU0 796 aaKnown RBP29.02■■■□□ 2.24
COL11A2-204ENST00000395194 ASXL1Q8IXJ9 1541 aa29.01■■■□□ 2.23
COL11A2-204ENST00000395194 MST1RQ04912 1400 aa29.01■■■□□ 2.23
COL11A2-204ENST00000395194 MEX3CQ5U5Q3 659 aaKnown RBP28.99■■■□□ 2.23
COL11A2-204ENST00000395194 ADGRL3Q9HAR2 1447 aa28.98■■■□□ 2.23
COL11A2-204ENST00000395194 PPLO60437 1756 aa28.98■■■□□ 2.23
COL11A2-204ENST00000395194 NHSL1Q5SYE7 1610 aa28.98■■■□□ 2.23
COL11A2-204ENST00000395194 SPATA31A6Q5VVP1 1343 aa28.97■■■□□ 2.23
COL11A2-204ENST00000395194 FOXD1Q16676 465 aa28.96■■■□□ 2.23
COL11A2-204ENST00000395194 NUTM2BA6NNL0 878 aaPredicted RBP28.93■■■□□ 2.22
COL11A2-204ENST00000395194 NUTM2EB1AL46 878 aaPredicted RBP28.93■■■□□ 2.22
COL11A2-204ENST00000395194 NUTM2AQ8IVF1 878 aaPredicted RBP28.93■■■□□ 2.22
COL11A2-204ENST00000395194 VGFO15240 615 aaPredicted RBP28.92■■■□□ 2.22
COL11A2-204ENST00000395194 DDX17Q92841 729 aaKnown RBP28.92■■■□□ 2.22
COL11A2-204ENST00000395194 ROBO2Q9HCK4 1378 aa28.89■■■□□ 2.22
COL11A2-204ENST00000395194 PTCH1Q13635 1447 aa28.88■■■□□ 2.21
COL11A2-204ENST00000395194 SETD5Q9C0A6 1442 aa28.86■■■□□ 2.21
COL11A2-204ENST00000395194 RPGRIP1LQ68CZ1 1315 aa28.86■■■□□ 2.21
COL11A2-204ENST00000395194 C1orf167Q5SNV9 1468 aa28.84■■■□□ 2.21
COL11A2-204ENST00000395194 ZNF772Q68DY9 489 aaPredicted RBP28.83■■■□□ 2.21
COL11A2-204ENST00000395194 CCDC144AA2RUR9 1427 aa28.82■■■□□ 2.2
COL11A2-204ENST00000395194 RGL3Q3MIN7 710 aa28.81■■■□□ 2.2
COL11A2-204ENST00000395194 LRRC59Q96AG4 307 aaKnown RBP28.8■■■□□ 2.2
COL11A2-204ENST00000395194 IFT172Q9UG01 1749 aa28.8■■■□□ 2.2
COL11A2-204ENST00000395194 PNPLA6Q8IY17 1366 aa28.78■■■□□ 2.2
COL11A2-204ENST00000395194 ADGRF5Q8IZF2 1346 aa28.78■■■□□ 2.2
COL11A2-204ENST00000395194 ORAI2Q96SN7 254 aa28.77■■■□□ 2.2
COL11A2-204ENST00000395194 MPHOSPH9Q99550 1183 aa28.77■■■□□ 2.2
COL11A2-204ENST00000395194 PRAG1Q86YV5 1406 aa28.77■■■□□ 2.2
COL11A2-204ENST00000395194 AFF2P51816 1311 aa28.76■■■□□ 2.19
COL11A2-204ENST00000395194 SPATA31E1Q6ZUB1 1445 aa28.74■■■□□ 2.19
COL11A2-204ENST00000395194 LAMC1P11047 1609 aa28.73■■■□□ 2.19
COL11A2-204ENST00000395194 C8orf37Q96NL8 207 aa28.72■■■□□ 2.19
COL11A2-204ENST00000395194 STK26Q9P289 416 aa28.72■■■□□ 2.19
COL11A2-204ENST00000395194 RXRBP28702 533 aa28.7■■■□□ 2.18
COL11A2-204ENST00000395194 CDC42BPGQ6DT37 1551 aa28.68■■■□□ 2.18
COL11A2-204ENST00000395194 ADAMTS2O95450 1211 aa28.68■■■□□ 2.18
COL11A2-204ENST00000395194 ANKRD30BQ9BXX2 1392 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms