RNA–Protein interactions for RNA: ENST00000394011.7

RALGPS1-206, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 1 (best) BASIC

Gene RALGPS1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-206ENST00000394011 SLC26A8Q96RN1 970 aa29.97■■■□□ 2.39
RALGPS1-206ENST00000394011 ITGAEP38570 1179 aa29.96■■■□□ 2.39
RALGPS1-206ENST00000394011 MED1Q15648 1581 aaPredicted RBP29.95■■■□□ 2.39
RALGPS1-206ENST00000394011 KCNA6P17658 529 aa29.95■■■□□ 2.39
RALGPS1-206ENST00000394011 RIMS2Q9UQ26 1411 aa29.94■■■□□ 2.38
RALGPS1-206ENST00000394011 RRBP1Q9P2E9 1410 aaKnown RBP29.93■■■□□ 2.38
RALGPS1-206ENST00000394011 NUP155O75694 1391 aa29.92■■■□□ 2.38
RALGPS1-206ENST00000394011 PLEKHG1Q9ULL1 1385 aa29.92■■■□□ 2.38
RALGPS1-206ENST00000394011 TMEM94Q12767 1356 aa29.9■■■□□ 2.38
RALGPS1-206ENST00000394011 CHD2O14647 1828 aaKnown RBP29.9■■■□□ 2.38
RALGPS1-206ENST00000394011 NKTRP30414 1462 aaKnown RBP29.88■■■□□ 2.37
RALGPS1-206ENST00000394011 SPHKAPQ2M3C7 1700 aa29.83■■■□□ 2.37
RALGPS1-206ENST00000394011 ADAMTS13Q76LX8 1427 aa29.83■■■□□ 2.37
RALGPS1-206ENST00000394011 RBM33Q96EV2 1170 aaKnown RBP29.83■■■□□ 2.37
RALGPS1-206ENST00000394011 SENP3Q9H4L4 574 aaPredicted RBP29.82■■■□□ 2.36
RALGPS1-206ENST00000394011 PROSER2Q86WR7 435 aaPredicted RBP29.81■■■□□ 2.36
RALGPS1-206ENST00000394011 FAM135BQ49AJ0 1406 aa29.8■■■□□ 2.36
RALGPS1-206ENST00000394011 NAIPQ13075 1403 aa29.79■■■□□ 2.36
RALGPS1-206ENST00000394011 CHGAP10645 457 aaKnown RBP29.79■■■□□ 2.36
RALGPS1-206ENST00000394011 HDGFP51858 240 aaKnown RBP29.78■■■□□ 2.36
RALGPS1-206ENST00000394011 TBX22Q9Y458 520 aa29.78■■■□□ 2.36
RALGPS1-206ENST00000394011 PPP1R15AO75807 674 aaPredicted RBP29.77■■■□□ 2.36
RALGPS1-206ENST00000394011 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.77■■■□□ 2.36
RALGPS1-206ENST00000394011 BCANQ96GW7 911 aa29.77■■■□□ 2.36
RALGPS1-206ENST00000394011 DIP2AQ14689 1571 aa29.77■■■□□ 2.36
RALGPS1-206ENST00000394011 ROBO1Q9Y6N7 1651 aa29.76■■■□□ 2.36
RALGPS1-206ENST00000394011 NUTM2DQ5VT03 806 aaPredicted RBP29.76■■■□□ 2.35
RALGPS1-206ENST00000394011 NRXN3Q9Y4C0 1643 aa29.73■■■□□ 2.35
RALGPS1-206ENST00000394011 CLTCL1P53675 1640 aa29.71■■■□□ 2.35
RALGPS1-206ENST00000394011 PIK3R4Q99570 1358 aa29.68■■■□□ 2.34
RALGPS1-206ENST00000394011 MSH6P52701 1360 aa29.67■■■□□ 2.34
RALGPS1-206ENST00000394011 TRPM2O94759 1503 aa29.67■■■□□ 2.34
RALGPS1-206ENST00000394011 PTPRUQ92729 1446 aa29.67■■■□□ 2.34
RALGPS1-206ENST00000394011 SETBP1Q9Y6X0 1596 aa29.66■■■□□ 2.34
RALGPS1-206ENST00000394011 HFM1A2PYH4 1435 aa29.66■■■□□ 2.34
RALGPS1-206ENST00000394011 NCOA3Q9Y6Q9 1424 aa29.66■■■□□ 2.34
RALGPS1-206ENST00000394011 NEXMIFQ5QGS0 1516 aa29.62■■■□□ 2.33
RALGPS1-206ENST00000394011 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.62■■■□□ 2.33
RALGPS1-206ENST00000394011 XRN1Q8IZH2 1706 aaKnown RBP29.61■■■□□ 2.33
RALGPS1-206ENST00000394011 SLAIN2Q9P270 581 aa29.6■■■□□ 2.33
RALGPS1-206ENST00000394011 KIF1BO60333 1816 aa29.59■■■□□ 2.33
RALGPS1-206ENST00000394011 PHLPP1O60346 1717 aa29.57■■■□□ 2.32
RALGPS1-206ENST00000394011 PHF23Q9BUL5 403 aaPredicted RBP29.56■■■□□ 2.32
RALGPS1-206ENST00000394011 RGS17Q9UGC6 210 aaPredicted RBP29.56■■■□□ 2.32
RALGPS1-206ENST00000394011 AMOTL2Q9Y2J4 779 aa29.56■■■□□ 2.32
RALGPS1-206ENST00000394011 COL16A1Q07092 1604 aaPredicted RBP29.53■■■□□ 2.32
RALGPS1-206ENST00000394011 METP08581 1390 aa29.52■■■□□ 2.32
RALGPS1-206ENST00000394011 ZNF326Q5BKZ1 582 aaKnown RBP29.52■■■□□ 2.32
RALGPS1-206ENST00000394011 C19orf44Q9H6X5 657 aa29.51■■■□□ 2.31
RALGPS1-206ENST00000394011 SETD1AO15047 1707 aaKnown RBP29.49■■■□□ 2.31
RALGPS1-206ENST00000394011 TRIM52Q96A61 297 aa29.47■■■□□ 2.31
RALGPS1-206ENST00000394011 CADPS2Q86UW7 1296 aa29.46■■■□□ 2.31
RALGPS1-206ENST00000394011 AHDC1Q5TGY3 1603 aaPredicted RBP29.45■■■□□ 2.31
RALGPS1-206ENST00000394011 C14orf37Q86TY3 774 aa29.45■■■□□ 2.31
RALGPS1-206ENST00000394011 SLC4A1APQ9BWU0 796 aaKnown RBP29.44■■■□□ 2.3
RALGPS1-206ENST00000394011 DCCP43146 1447 aa29.44■■■□□ 2.3
RALGPS1-206ENST00000394011 PPLO60437 1756 aa29.42■■■□□ 2.3
RALGPS1-206ENST00000394011 JCADQ9P266 1359 aa29.41■■■□□ 2.3
RALGPS1-206ENST00000394011 ATF3P18847 181 aa29.41■■■□□ 2.3
RALGPS1-206ENST00000394011 NALCNQ8IZF0 1738 aa29.4■■■□□ 2.3
RALGPS1-206ENST00000394011 MST1RQ04912 1400 aa29.37■■■□□ 2.29
RALGPS1-206ENST00000394011 FOXD1Q16676 465 aa29.36■■■□□ 2.29
RALGPS1-206ENST00000394011 BRINP3Q76B58 766 aa29.36■■■□□ 2.29
RALGPS1-206ENST00000394011 SHPRHQ149N8 1683 aa29.35■■■□□ 2.29
RALGPS1-206ENST00000394011 POTEAQ6S8J7 498 aa29.35■■■□□ 2.29
RALGPS1-206ENST00000394011 ADGRL3Q9HAR2 1447 aa29.35■■■□□ 2.29
RALGPS1-206ENST00000394011 RPGRIP1LQ68CZ1 1315 aa29.34■■■□□ 2.29
RALGPS1-206ENST00000394011 ASXL1Q8IXJ9 1541 aa29.34■■■□□ 2.29
RALGPS1-206ENST00000394011 LRP6O75581 1613 aa29.34■■■□□ 2.29
RALGPS1-206ENST00000394011 VGFO15240 615 aaPredicted RBP29.33■■■□□ 2.29
RALGPS1-206ENST00000394011 PRAG1Q86YV5 1406 aa29.33■■■□□ 2.29
RALGPS1-206ENST00000394011 NHSL1Q5SYE7 1610 aa29.33■■■□□ 2.29
RALGPS1-206ENST00000394011 PTCH1Q13635 1447 aa29.31■■■□□ 2.28
RALGPS1-206ENST00000394011 IFT172Q9UG01 1749 aa29.29■■■□□ 2.28
RALGPS1-206ENST00000394011 SPATA31E1Q6ZUB1 1445 aa29.28■■■□□ 2.28
RALGPS1-206ENST00000394011 ROBO2Q9HCK4 1378 aa29.28■■■□□ 2.28
RALGPS1-206ENST00000394011 MPHOSPH9Q99550 1183 aa29.27■■■□□ 2.28
RALGPS1-206ENST00000394011 SPATA31A6Q5VVP1 1343 aa29.25■■■□□ 2.27
RALGPS1-206ENST00000394011 CCDC144AA2RUR9 1427 aa29.24■■■□□ 2.27
RALGPS1-206ENST00000394011 SETD5Q9C0A6 1442 aa29.23■■■□□ 2.27
RALGPS1-206ENST00000394011 ADGRF5Q8IZF2 1346 aa29.2■■■□□ 2.27
RALGPS1-206ENST00000394011 LAMC1P11047 1609 aa29.2■■■□□ 2.27
RALGPS1-206ENST00000394011 C1orf167Q5SNV9 1468 aa29.19■■■□□ 2.26
RALGPS1-206ENST00000394011 DDX17Q92841 729 aaKnown RBP29.17■■■□□ 2.26
RALGPS1-206ENST00000394011 RGL3Q3MIN7 710 aa29.14■■■□□ 2.26
RALGPS1-206ENST00000394011 ANKRD30BQ9BXX2 1392 aa29.13■■■□□ 2.25
RALGPS1-206ENST00000394011 PIK3C2GO75747 1445 aa29.12■■■□□ 2.25
RALGPS1-206ENST00000394011 TECPR2O15040 1411 aa29.11■■■□□ 2.25
RALGPS1-206ENST00000394011 KNDC1Q76NI1 1749 aa29.11■■■□□ 2.25
RALGPS1-206ENST00000394011 CDC42BPGQ6DT37 1551 aa29.09■■■□□ 2.25
RALGPS1-206ENST00000394011 ORAI2Q96SN7 254 aa29.09■■■□□ 2.25
RALGPS1-206ENST00000394011 PNPLA6Q8IY17 1366 aa29.09■■■□□ 2.25
RALGPS1-206ENST00000394011 LRRC59Q96AG4 307 aaKnown RBP29.08■■■□□ 2.25
RALGPS1-206ENST00000394011 RAB3GAP2Q9H2M9 1393 aa29.07■■■□□ 2.24
RALGPS1-206ENST00000394011 LRPPRCP42704 1394 aaKnown RBP29.06■■■□□ 2.24
RALGPS1-206ENST00000394011 ACIN1Q9UKV3 1341 aaKnown RBP29.06■■■□□ 2.24
RALGPS1-206ENST00000394011 MEX3CQ5U5Q3 659 aaKnown RBP29.06■■■□□ 2.24
RALGPS1-206ENST00000394011 NRXN1Q9ULB1 1477 aa29.05■■■□□ 2.24
RALGPS1-206ENST00000394011 SOS2Q07890 1332 aaPredicted RBP29.04■■■□□ 2.24
RALGPS1-206ENST00000394011 NUTM2BA6NNL0 878 aaPredicted RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms