RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 LRCH3Q96II8 777 aa6.97□□□□□ -1.29
RNU6-550P-201ENST00000391057 GPCPD1Q9NPB8 672 aa6.97□□□□□ -1.29
RNU6-550P-201ENST00000391057 MYT1LQ9UL68 1186 aa6.97□□□□□ -1.29
RNU6-550P-201ENST00000391057 RNF40O75150 1001 aa6.96□□□□□ -1.3
RNU6-550P-201ENST00000391057 SPNS2Q8IVW8 549 aa6.96□□□□□ -1.3
RNU6-550P-201ENST00000391057 DAXXQ9UER7 740 aaPredicted RBP6.96□□□□□ -1.3
RNU6-550P-201ENST00000391057 SLF2Q8IX21 1173 aa6.95□□□□□ -1.3
RNU6-550P-201ENST00000391057 PARP9Q8IXQ6 854 aa6.95□□□□□ -1.3
RNU6-550P-201ENST00000391057 KCTD12Q96CX2 325 aaKnown RBP6.95□□□□□ -1.3
RNU6-550P-201ENST00000391057 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.95□□□□□ -1.3
RNU6-550P-201ENST00000391057 NEUROD2Q15784 382 aa6.94□□□□□ -1.3
RNU6-550P-201ENST00000391057 SULF1Q8IWU6 871 aa6.94□□□□□ -1.3
RNU6-550P-201ENST00000391057 SOWAHBA6NEL2 793 aa6.93□□□□□ -1.3
RNU6-550P-201ENST00000391057 BCAMP50895 628 aa6.93□□□□□ -1.3
RNU6-550P-201ENST00000391057 GIGYF2Q6Y7W6 1299 aaKnown RBP6.93□□□□□ -1.3
RNU6-550P-201ENST00000391057 TMUB1Q9BVT8 246 aa6.93□□□□□ -1.3
RNU6-550P-201ENST00000391057 DDX11L8A8MPP1 907 aa6.92□□□□□ -1.3
RNU6-550P-201ENST00000391057 BRPF1P55201 1214 aaPredicted RBP6.92□□□□□ -1.3
RNU6-550P-201ENST00000391057 RSPH4AQ5TD94 716 aa6.92□□□□□ -1.3
RNU6-550P-201ENST00000391057 THSD4Q6ZMP0 1018 aa6.92□□□□□ -1.3
RNU6-550P-201ENST00000391057 RDH13Q8NBN7 331 aa6.92□□□□□ -1.3
RNU6-550P-201ENST00000391057 NECTIN2Q92692 538 aa6.92□□□□□ -1.3
RNU6-550P-201ENST00000391057 RNF166Q96A37 237 aaPredicted RBP6.92□□□□□ -1.3
RNU6-550P-201ENST00000391057 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
RNU6-550P-201ENST00000391057 GPBP1L1Q9HC44 474 aaPredicted RBP6.92□□□□□ -1.3
RNU6-550P-201ENST00000391057 KDM4CQ9H3R0 1056 aa6.91□□□□□ -1.3
RNU6-550P-201ENST00000391057 FAM217BQ9NTX9 383 aaPredicted RBP6.91□□□□□ -1.3
RNU6-550P-201ENST00000391057 HPS5Q9UPZ3 1129 aa6.91□□□□□ -1.3
RNU6-550P-201ENST00000391057 SSTR3P32745 418 aaPredicted RBP6.9□□□□□ -1.3
RNU6-550P-201ENST00000391057 PPP4CP60510 307 aa6.9□□□□□ -1.3
RNU6-550P-201ENST00000391057 TSR3Q9UJK0 312 aaKnown RBP6.9□□□□□ -1.3
RNU6-550P-201ENST00000391057 CFHP08603 1231 aa6.88□□□□□ -1.31
RNU6-550P-201ENST00000391057 SLC10A3P09131 477 aa6.88□□□□□ -1.31
RNU6-550P-201ENST00000391057 MS4A1P11836 297 aa6.88□□□□□ -1.31
RNU6-550P-201ENST00000391057 CD46P15529 392 aa6.88□□□□□ -1.31
RNU6-550P-201ENST00000391057 PTPN5P54829 565 aa6.88□□□□□ -1.31
RNU6-550P-201ENST00000391057 MMRN1Q13201 1228 aa6.87□□□□□ -1.31
RNU6-550P-201ENST00000391057 KMT5BQ4FZB7 885 aa6.87□□□□□ -1.31
RNU6-550P-201ENST00000391057 PRR14Q9BWN1 585 aa6.86□□□□□ -1.31
RNU6-550P-201ENST00000391057 WBP1LQ9NX94 342 aa6.86□□□□□ -1.31
RNU6-550P-201ENST00000391057 GCGRP47871 477 aa6.85□□□□□ -1.31
RNU6-550P-201ENST00000391057 NYAP1Q6ZVC0 841 aa6.85□□□□□ -1.31
RNU6-550P-201ENST00000391057 DDRGK1Q96HY6 314 aa6.85□□□□□ -1.31
RNU6-550P-201ENST00000391057 BEGAINQ9BUH8 593 aa6.85□□□□□ -1.31
RNU6-550P-201ENST00000391057 HCSTQ9UBK5 93 aa6.85□□□□□ -1.31
RNU6-550P-201ENST00000391057 NUTM1Q86Y26 1132 aa6.84□□□□□ -1.31
RNU6-550P-201ENST00000391057 APLP1P51693 650 aa6.83□□□□□ -1.32
RNU6-550P-201ENST00000391057 FAM117AQ9C073 453 aa6.83□□□□□ -1.32
RNU6-550P-201ENST00000391057 ACTN4O43707 911 aaKnown RBP6.82□□□□□ -1.32
RNU6-550P-201ENST00000391057 KDM4AO75164 1064 aa6.82□□□□□ -1.32
RNU6-550P-201ENST00000391057 USP46P62068 366 aa6.81□□□□□ -1.32
RNU6-550P-201ENST00000391057 DIXDC1Q155Q3 683 aa6.81□□□□□ -1.32
RNU6-550P-201ENST00000391057 GRIPAP1Q4V328 841 aa6.81□□□□□ -1.32
RNU6-550P-201ENST00000391057 FUT2Q10981 343 aa6.8□□□□□ -1.32
RNU6-550P-201ENST00000391057 IL27Q8NEV9 243 aa6.8□□□□□ -1.32
RNU6-550P-201ENST00000391057 SPIRE2Q8WWL2 714 aa6.8□□□□□ -1.32
RNU6-550P-201ENST00000391057 TBC1D2Q9BYX2 928 aa6.8□□□□□ -1.32
RNU6-550P-201ENST00000391057 PCDHB3Q9Y5E6 796 aa6.8□□□□□ -1.32
RNU6-550P-201ENST00000391057 PLEKHG3A1L390 1219 aa6.79□□□□□ -1.32
RNU6-550P-201ENST00000391057 RSPH6AQ9H0K4 717 aa6.79□□□□□ -1.32
RNU6-550P-201ENST00000391057 HOXA2O43364 376 aa6.78□□□□□ -1.32
RNU6-550P-201ENST00000391057 ATP6V1AP38606 617 aa6.78□□□□□ -1.32
RNU6-550P-201ENST00000391057 PUS10Q3MIT2 529 aaKnown RBP6.77□□□□□ -1.33
RNU6-550P-201ENST00000391057 PLSCR2Q9NRY7 297 aa6.77□□□□□ -1.33
RNU6-550P-201ENST00000391057 NR1I2O75469 434 aa6.76□□□□□ -1.33
RNU6-550P-201ENST00000391057 COPS2P61201 443 aa6.76□□□□□ -1.33
RNU6-550P-201ENST00000391057 SH3D19Q5HYK7 790 aa6.76□□□□□ -1.33
RNU6-550P-201ENST00000391057 MORN1Q5T089 497 aa6.76□□□□□ -1.33
RNU6-550P-201ENST00000391057 MYSM1Q5VVJ2 828 aa6.76□□□□□ -1.33
RNU6-550P-201ENST00000391057 BLOC1S3Q6QNY0 202 aa6.76□□□□□ -1.33
RNU6-550P-201ENST00000391057 MOXD2PA6NHM9 499 aa6.75□□□□□ -1.33
RNU6-550P-201ENST00000391057 NDUFV2P19404 249 aa6.75□□□□□ -1.33
RNU6-550P-201ENST00000391057 HLA-CQ95604 372 aa6.75□□□□□ -1.33
RNU6-550P-201ENST00000391057 MTRQ99707 1265 aa6.75□□□□□ -1.33
RNU6-550P-201ENST00000391057 IL21Q9HBE4 155 aa6.75□□□□□ -1.33
RNU6-550P-201ENST00000391057 FDX1P10109 184 aa6.74□□□□□ -1.33
RNU6-550P-201ENST00000391057 CLK2P49760 499 aaKnown RBP6.74□□□□□ -1.33
RNU6-550P-201ENST00000391057 GUCA2AQ02747 115 aa6.74□□□□□ -1.33
RNU6-550P-201ENST00000391057 RSBN1LQ6PCB5 846 aaPredicted RBP6.74□□□□□ -1.33
RNU6-550P-201ENST00000391057 RIC3Q7Z5B4 369 aa6.74□□□□□ -1.33
RNU6-550P-201ENST00000391057 ATP1B4Q9UN42 357 aaPredicted RBP6.74□□□□□ -1.33
RNU6-550P-201ENST00000391057 SPTLC1O15269 473 aa6.73□□□□□ -1.33
RNU6-550P-201ENST00000391057 GJA5P36382 358 aa6.73□□□□□ -1.33
RNU6-550P-201ENST00000391057 SKIV2LQ15477 1246 aaKnown RBP6.73□□□□□ -1.33
RNU6-550P-201ENST00000391057 Q3C1V9 767 aa6.73□□□□□ -1.33
RNU6-550P-201ENST00000391057 TJAP1Q5JTD0 557 aa6.73□□□□□ -1.33
RNU6-550P-201ENST00000391057 POLR3EQ9NVU0 708 aa6.73□□□□□ -1.33
RNU6-550P-201ENST00000391057 SLC27A5Q9Y2P5 690 aa6.73□□□□□ -1.33
RNU6-550P-201ENST00000391057 ITGBL1O95965 494 aaPredicted RBP6.72□□□□□ -1.33
RNU6-550P-201ENST00000391057 TMEM132AQ24JP5 1023 aa6.72□□□□□ -1.33
RNU6-550P-201ENST00000391057 PCMTD1Q96MG8 357 aaPredicted RBP6.72□□□□□ -1.33
RNU6-550P-201ENST00000391057 GOPCQ9HD26 462 aa6.72□□□□□ -1.33
RNU6-550P-201ENST00000391057 ZPR1O75312 459 aa6.71□□□□□ -1.34
RNU6-550P-201ENST00000391057 FMNL1O95466 1100 aaPredicted RBP6.71□□□□□ -1.34
RNU6-550P-201ENST00000391057 KCNC4Q03721 635 aa6.71□□□□□ -1.34
RNU6-550P-201ENST00000391057 CSPP1Q1MSJ5 1256 aa6.71□□□□□ -1.34
RNU6-550P-201ENST00000391057 SCUBE3Q8IX30 993 aa6.71□□□□□ -1.34
RNU6-550P-201ENST00000391057 LIMD1Q9UGP4 676 aa6.71□□□□□ -1.34
RNU6-550P-201ENST00000391057 TUSC1Q2TAM9 212 aa6.7□□□□□ -1.34
RNU6-550P-201ENST00000391057 PCDHGC3Q9UN70 934 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms