RNA–Protein interactions for RNA: ENST00000390847.1

SNORA40.2-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 128 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.2-201ENST00000390847 DDRGK1Q96HY6 314 aa9.43□□□□□ -0.9
SNORA40.2-201ENST00000390847 FAM217BQ9NTX9 383 aaPredicted RBP9.43□□□□□ -0.9
SNORA40.2-201ENST00000390847 LAPTM4BQ86VI4 370 aa9.42□□□□□ -0.9
SNORA40.2-201ENST00000390847 POTEMA6NI47 508 aa9.41□□□□□ -0.9
SNORA40.2-201ENST00000390847 DDX11L8A8MPP1 907 aa9.41□□□□□ -0.9
SNORA40.2-201ENST00000390847 SULF1Q8IWU6 871 aa9.41□□□□□ -0.9
SNORA40.2-201ENST00000390847 BHMG1C9JSJ3 638 aaPredicted RBP9.4□□□□□ -0.9
SNORA40.2-201ENST00000390847 SLC4A3P48751 1232 aa9.4□□□□□ -0.9
SNORA40.2-201ENST00000390847 SWT1Q5T5J6 900 aaKnown RBP9.4□□□□□ -0.9
SNORA40.2-201ENST00000390847 GOLGA8CPA6NN73 597 aa9.39□□□□□ -0.91
SNORA40.2-201ENST00000390847 RNF40O75150 1001 aa9.39□□□□□ -0.91
SNORA40.2-201ENST00000390847 RDH13Q8NBN7 331 aa9.39□□□□□ -0.91
SNORA40.2-201ENST00000390847 BEGAINQ9BUH8 593 aa9.39□□□□□ -0.91
SNORA40.2-201ENST00000390847 CDAN1Q8IWY9 1227 aa9.38□□□□□ -0.91
SNORA40.2-201ENST00000390847 ZFRQ96KR1 1074 aaKnown RBP9.38□□□□□ -0.91
SNORA40.2-201ENST00000390847 KRTAP3-3Q9BYR6 98 aa9.38□□□□□ -0.91
SNORA40.2-201ENST00000390847 KRTAP3-2Q9BYR7 98 aa9.38□□□□□ -0.91
SNORA40.2-201ENST00000390847 PLEKHG3A1L390 1219 aa9.37□□□□□ -0.91
SNORA40.2-201ENST00000390847 HRO43593 1189 aa9.37□□□□□ -0.91
SNORA40.2-201ENST00000390847 RSPH4AQ5TD94 716 aa9.37□□□□□ -0.91
SNORA40.2-201ENST00000390847 SAMD7Q7Z3H4 446 aa9.37□□□□□ -0.91
SNORA40.2-201ENST00000390847 SLF2Q8IX21 1173 aa9.35□□□□□ -0.91
SNORA40.2-201ENST00000390847 CD46P15529 392 aa9.34□□□□□ -0.91
SNORA40.2-201ENST00000390847 ANKK1Q8NFD2 765 aa9.34□□□□□ -0.91
SNORA40.2-201ENST00000390847 LRCH3Q96II8 777 aa9.34□□□□□ -0.91
SNORA40.2-201ENST00000390847 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.33□□□□□ -0.92
SNORA40.2-201ENST00000390847 ATP1B4Q9UN42 357 aaPredicted RBP9.33□□□□□ -0.92
SNORA40.2-201ENST00000390847 NUTM1Q86Y26 1132 aa9.32□□□□□ -0.92
SNORA40.2-201ENST00000390847 RSPH6AQ9H0K4 717 aa9.32□□□□□ -0.92
SNORA40.2-201ENST00000390847 WNT2BQ93097 391 aa9.31□□□□□ -0.92
SNORA40.2-201ENST00000390847 SLC10A3P09131 477 aa9.3□□□□□ -0.92
SNORA40.2-201ENST00000390847 TBC1D2Q9BYX2 928 aa9.3□□□□□ -0.92
SNORA40.2-201ENST00000390847 DIXDC1Q155Q3 683 aa9.29□□□□□ -0.92
SNORA40.2-201ENST00000390847 CFHP08603 1231 aa9.28□□□□□ -0.92
SNORA40.2-201ENST00000390847 GCGRP47871 477 aa9.28□□□□□ -0.92
SNORA40.2-201ENST00000390847 BCAMP50895 628 aa9.28□□□□□ -0.92
SNORA40.2-201ENST00000390847 SH3D19Q5HYK7 790 aa9.28□□□□□ -0.92
SNORA40.2-201ENST00000390847 NECTIN2Q92692 538 aa9.28□□□□□ -0.92
SNORA40.2-201ENST00000390847 POLR3EQ9NVU0 708 aa9.28□□□□□ -0.92
SNORA40.2-201ENST00000390847 SOWAHBA6NEL2 793 aa9.27□□□□□ -0.93
SNORA40.2-201ENST00000390847 KDM4AO75164 1064 aa9.27□□□□□ -0.93
SNORA40.2-201ENST00000390847 SPIRE2Q8WWL2 714 aa9.27□□□□□ -0.93
SNORA40.2-201ENST00000390847 PCMTD1Q96MG8 357 aaPredicted RBP9.27□□□□□ -0.93
SNORA40.2-201ENST00000390847 PPP4CP60510 307 aa9.26□□□□□ -0.93
SNORA40.2-201ENST00000390847 MYSM1Q5VVJ2 828 aa9.26□□□□□ -0.93
SNORA40.2-201ENST00000390847 GOPCQ9HD26 462 aa9.26□□□□□ -0.93
SNORA40.2-201ENST00000390847 HPS5Q9UPZ3 1129 aa9.26□□□□□ -0.93
SNORA40.2-201ENST00000390847 GTF3C3Q9Y5Q9 886 aa9.26□□□□□ -0.93
SNORA40.2-201ENST00000390847 SKIV2LQ15477 1246 aaKnown RBP9.25□□□□□ -0.93
SNORA40.2-201ENST00000390847 KCTD12Q96CX2 325 aaKnown RBP9.25□□□□□ -0.93
SNORA40.2-201ENST00000390847 KMT5BQ4FZB7 885 aa9.24□□□□□ -0.93
SNORA40.2-201ENST00000390847 TSR3Q9UJK0 312 aaKnown RBP9.24□□□□□ -0.93
SNORA40.2-201ENST00000390847 CLK2P49760 499 aaKnown RBP9.23□□□□□ -0.93
SNORA40.2-201ENST00000390847 USP46P62068 366 aa9.23□□□□□ -0.93
SNORA40.2-201ENST00000390847 RIC3Q7Z5B4 369 aa9.23□□□□□ -0.93
SNORA40.2-201ENST00000390847 MOXD2PA6NHM9 499 aa9.21□□□□□ -0.94
SNORA40.2-201ENST00000390847 NDUFV2P19404 249 aa9.21□□□□□ -0.94
SNORA40.2-201ENST00000390847 FUT2Q10981 343 aa9.21□□□□□ -0.94
SNORA40.2-201ENST00000390847 GRIPAP1Q4V328 841 aa9.21□□□□□ -0.94
SNORA40.2-201ENST00000390847 THSD4Q6ZMP0 1018 aa9.21□□□□□ -0.94
SNORA40.2-201ENST00000390847 PROCA1Q8NCQ7 364 aaPredicted RBP9.21□□□□□ -0.94
SNORA40.2-201ENST00000390847 PRR14Q9BWN1 585 aa9.21□□□□□ -0.94
SNORA40.2-201ENST00000390847 HOXA2O43364 376 aa9.2□□□□□ -0.94
SNORA40.2-201ENST00000390847 CSPP1Q1MSJ5 1256 aa9.2□□□□□ -0.94
SNORA40.2-201ENST00000390847 RSBN1LQ6PCB5 846 aaPredicted RBP9.2□□□□□ -0.94
SNORA40.2-201ENST00000390847 WBP1LQ9NX94 342 aa9.2□□□□□ -0.94
SNORA40.2-201ENST00000390847 LIMD1Q9UGP4 676 aa9.2□□□□□ -0.94
SNORA40.2-201ENST00000390847 MYT1LQ9UL68 1186 aa9.2□□□□□ -0.94
SNORA40.2-201ENST00000390847 PCDH10Q9P2E7 1040 aa9.19□□□□□ -0.94
SNORA40.2-201ENST00000390847 SPTLC1O15269 473 aa9.18□□□□□ -0.94
SNORA40.2-201ENST00000390847 ACTN4O43707 911 aaKnown RBP9.18□□□□□ -0.94
SNORA40.2-201ENST00000390847 ATP6V1AP38606 617 aa9.18□□□□□ -0.94
SNORA40.2-201ENST00000390847 APLP1P51693 650 aa9.18□□□□□ -0.94
SNORA40.2-201ENST00000390847 PTPN5P54829 565 aa9.18□□□□□ -0.94
SNORA40.2-201ENST00000390847 FDX1P10109 184 aa9.17□□□□□ -0.94
SNORA40.2-201ENST00000390847 GUCA2AQ02747 115 aa9.17□□□□□ -0.94
SNORA40.2-201ENST00000390847 HLA-CQ95604 372 aa9.17□□□□□ -0.94
SNORA40.2-201ENST00000390847 PUS10Q3MIT2 529 aaKnown RBP9.16□□□□□ -0.94
SNORA40.2-201ENST00000390847 NUTM2BA6NNL0 878 aaPredicted RBP9.15□□□□□ -0.94
SNORA40.2-201ENST00000390847 NUTM2EB1AL46 878 aaPredicted RBP9.15□□□□□ -0.94
SNORA40.2-201ENST00000390847 GJA5P36382 358 aa9.15□□□□□ -0.94
SNORA40.2-201ENST00000390847 NUTM2DQ5VT03 806 aaPredicted RBP9.15□□□□□ -0.94
SNORA40.2-201ENST00000390847 NUTM2AQ8IVF1 878 aaPredicted RBP9.15□□□□□ -0.94
SNORA40.2-201ENST00000390847 PCDHB3Q9Y5E6 796 aa9.15□□□□□ -0.94
SNORA40.2-201ENST00000390847 PCDHB15Q9Y5E8 787 aa9.15□□□□□ -0.94
SNORA40.2-201ENST00000390847 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.14□□□□□ -0.95
SNORA40.2-201ENST00000390847 PCDHGC3Q9UN70 934 aa9.13□□□□□ -0.95
SNORA40.2-201ENST00000390847 C6orf229H3BNL8 230 aa9.12□□□□□ -0.95
SNORA40.2-201ENST00000390847 QPCTQ16769 361 aa9.12□□□□□ -0.95
SNORA40.2-201ENST00000390847 TUSC1Q2TAM9 212 aa9.12□□□□□ -0.95
SNORA40.2-201ENST00000390847 MORN1Q5T089 497 aa9.12□□□□□ -0.95
SNORA40.2-201ENST00000390847 NYAP1Q6ZVC0 841 aa9.12□□□□□ -0.95
SNORA40.2-201ENST00000390847 CABLES1Q8TDN4 633 aa9.12□□□□□ -0.95
SNORA40.2-201ENST00000390847 ZBTB3Q9H5J0 574 aa9.12□□□□□ -0.95
SNORA40.2-201ENST00000390847 PRPF38BQ5VTL8 546 aaKnown RBP9.11□□□□□ -0.95
SNORA40.2-201ENST00000390847 SPNS2Q8IVW8 549 aa9.11□□□□□ -0.95
SNORA40.2-201ENST00000390847 SLC27A5Q9Y2P5 690 aa9.11□□□□□ -0.95
SNORA40.2-201ENST00000390847 NR1I2O75469 434 aa9.1□□□□□ -0.95
SNORA40.2-201ENST00000390847 HRCP23327 699 aa9.1□□□□□ -0.95
SNORA40.2-201ENST00000390847 COPS2P61201 443 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms