RNA–Protein interactions for RNA: ENST00000389048.7

ALK-201, Transcript of ALK receptor tyrosine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALK, Length 6,220 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-201ENST00000389048 CPLX1O14810 134 aa18.94■□□□□ 0.62
ALK-201ENST00000389048 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
ALK-201ENST00000389048 SKOR2Q2VWA4 1001 aaPredicted RBP18.94■□□□□ 0.62
ALK-201ENST00000389048 TEX35Q5T0J7 233 aa18.94■□□□□ 0.62
ALK-201ENST00000389048 NLRP13Q86W25 1043 aa18.94■□□□□ 0.62
ALK-201ENST00000389048 EVA1CP58658 441 aa18.94■□□□□ 0.62
ALK-201ENST00000389048 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.93■□□□□ 0.62
ALK-201ENST00000389048 ZKSCAN2Q63HK3 967 aa18.93■□□□□ 0.62
ALK-201ENST00000389048 ATP6V1DQ9Y5K8 247 aa18.93■□□□□ 0.62
ALK-201ENST00000389048 CARMIL1Q5VZK9 1371 aa18.93■□□□□ 0.62
ALK-201ENST00000389048 CUX2O14529 1486 aa18.93■□□□□ 0.62
ALK-201ENST00000389048 IPO7O95373 1038 aaKnown RBP18.93■□□□□ 0.62
ALK-201ENST00000389048 IFIT2P09913 472 aaKnown RBP18.93■□□□□ 0.62
ALK-201ENST00000389048 KLHL34Q8N239 644 aa18.93■□□□□ 0.62
ALK-201ENST00000389048 RUFY1Q96T51 708 aa18.93■□□□□ 0.62
ALK-201ENST00000389048 RNF214Q8ND24 703 aa18.92■□□□□ 0.62
ALK-201ENST00000389048 HDAC5Q9UQL6 1122 aa18.92■□□□□ 0.62
ALK-201ENST00000389048 CCDC27Q2M243 656 aa18.92■□□□□ 0.62
ALK-201ENST00000389048 VPS37DQ86XT2 251 aa18.91■□□□□ 0.62
ALK-201ENST00000389048 SASS6Q6UVJ0 657 aa18.91■□□□□ 0.62
ALK-201ENST00000389048 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
ALK-201ENST00000389048 ZFYVE27Q5T4F4 411 aa18.9■□□□□ 0.62
ALK-201ENST00000389048 NOL10Q9BSC4 688 aaKnown RBP18.9■□□□□ 0.62
ALK-201ENST00000389048 PLCD4Q9BRC7 762 aa18.89■□□□□ 0.62
ALK-201ENST00000389048 APAF1O14727 1248 aa18.89■□□□□ 0.61
ALK-201ENST00000389048 MNS1Q8NEH6 495 aa18.89■□□□□ 0.61
ALK-201ENST00000389048 MYBBP1AQ9BQG0 1328 aaKnown RBP18.89■□□□□ 0.61
ALK-201ENST00000389048 RBM10P98175 930 aaKnown RBP18.88■□□□□ 0.61
ALK-201ENST00000389048 CT47A1Q5JQC4 288 aaPredicted RBP18.88■□□□□ 0.61
ALK-201ENST00000389048 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
ALK-201ENST00000389048 MAP7D2Q96T17 732 aa18.87■□□□□ 0.61
ALK-201ENST00000389048 KIF15Q9NS87 1388 aa18.87■□□□□ 0.61
ALK-201ENST00000389048 FAM43AQ8N2R8 423 aa18.87■□□□□ 0.61
ALK-201ENST00000389048 ANKRD20A12PQ8NF67 263 aa18.87■□□□□ 0.61
ALK-201ENST00000389048 SMC3Q9UQE7 1217 aa18.87■□□□□ 0.61
ALK-201ENST00000389048 WASHC2CQ9Y4E1 1318 aa18.87■□□□□ 0.61
ALK-201ENST00000389048 ZKSCAN1P17029 563 aaPredicted RBP18.87■□□□□ 0.61
ALK-201ENST00000389048 LNPKQ9C0E8 428 aa18.87■□□□□ 0.61
ALK-201ENST00000389048 EID1Q9Y6B2 187 aa18.87■□□□□ 0.61
ALK-201ENST00000389048 MPNDQ8N594 471 aa18.86■□□□□ 0.61
ALK-201ENST00000389048 MINK1Q8N4C8 1332 aaPredicted RBP18.86■□□□□ 0.61
ALK-201ENST00000389048 TTC5Q8N0Z6 440 aa18.86■□□□□ 0.61
ALK-201ENST00000389048 TEFQ10587 303 aa18.86■□□□□ 0.61
ALK-201ENST00000389048 STK11IPQ8N1F8 1099 aa18.86■□□□□ 0.61
ALK-201ENST00000389048 CAGE1Q8TC20 777 aa18.86■□□□□ 0.61
ALK-201ENST00000389048 PKNOX2Q96KN3 472 aa18.86■□□□□ 0.61
ALK-201ENST00000389048 AK7Q96M32 723 aa18.86■□□□□ 0.61
ALK-201ENST00000389048 HSP90AB2PQ58FF8 381 aa18.85■□□□□ 0.61
ALK-201ENST00000389048 CCDC43Q96MW1 224 aaKnown RBP18.85■□□□□ 0.61
ALK-201ENST00000389048 AIMP1Q12904 312 aaKnown RBP18.85■□□□□ 0.61
ALK-201ENST00000389048 COG3Q96JB2 828 aa18.85■□□□□ 0.61
ALK-201ENST00000389048 CCDC47Q96A33 483 aaKnown RBP18.85■□□□□ 0.61
ALK-201ENST00000389048 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
ALK-201ENST00000389048 CHMP4AQ9BY43 222 aa18.84■□□□□ 0.61
ALK-201ENST00000389048 MAPK8IP2Q13387 824 aaPredicted RBP18.83■□□□□ 0.61
ALK-201ENST00000389048 ODF2Q5BJF6 829 aa18.83■□□□□ 0.61
ALK-201ENST00000389048 RUFY2Q8WXA3 655 aa18.83■□□□□ 0.61
ALK-201ENST00000389048 NEUROD6Q96NK8 337 aa18.83■□□□□ 0.6
ALK-201ENST00000389048 CWC22Q9HCG8 908 aaKnown RBP18.83■□□□□ 0.6
ALK-201ENST00000389048 NEXNQ0ZGT2 675 aa18.82■□□□□ 0.6
ALK-201ENST00000389048 CPLX2Q6PUV4 134 aaKnown RBP18.82■□□□□ 0.6
ALK-201ENST00000389048 TRDNQ13061 729 aa18.82■□□□□ 0.6
ALK-201ENST00000389048 ERICH2A1L162 156 aa18.82■□□□□ 0.6
ALK-201ENST00000389048 E9PSI1 815 aa18.82■□□□□ 0.6
ALK-201ENST00000389048 FKBP5Q13451 457 aaPredicted RBP18.82■□□□□ 0.6
ALK-201ENST00000389048 HMOX1P09601 288 aa18.82■□□□□ 0.6
ALK-201ENST00000389048 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
ALK-201ENST00000389048 BRPF1P55201 1214 aaPredicted RBP18.82■□□□□ 0.6
ALK-201ENST00000389048 RIPK4P57078 832 aa18.82■□□□□ 0.6
ALK-201ENST00000389048 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
ALK-201ENST00000389048 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.81■□□□□ 0.6
ALK-201ENST00000389048 REC8O95072 547 aa18.81■□□□□ 0.6
ALK-201ENST00000389048 EPS15P42566 896 aa18.81■□□□□ 0.6
ALK-201ENST00000389048 CEBPZQ03701 1054 aaKnown RBP18.81■□□□□ 0.6
ALK-201ENST00000389048 ATP2B1P20020 1258 aa18.8■□□□□ 0.6
ALK-201ENST00000389048 WASHC4Q2M389 1173 aa18.8■□□□□ 0.6
ALK-201ENST00000389048 ABCC8Q09428 1581 aa18.8■□□□□ 0.6
ALK-201ENST00000389048 CHMP5Q9NZZ3 219 aa18.8■□□□□ 0.6
ALK-201ENST00000389048 FAM177BA6PVY3 158 aa18.8■□□□□ 0.6
ALK-201ENST00000389048 PANK1Q8TE04 598 aa18.8■□□□□ 0.6
ALK-201ENST00000389048 FMNL2Q96PY5 1086 aa18.8■□□□□ 0.6
ALK-201ENST00000389048 HOOK1Q9UJC3 728 aaKnown RBP18.8■□□□□ 0.6
ALK-201ENST00000389048 SPC24Q8NBT2 197 aa18.8■□□□□ 0.6
ALK-201ENST00000389048 CGNL1Q0VF96 1302 aa18.79■□□□□ 0.6
ALK-201ENST00000389048 G3BP1Q13283 466 aaKnown RBP eCLIP18.79■□□□□ 0.6
ALK-201ENST00000389048 NUTM2GQ5VZR2 741 aa18.79■□□□□ 0.6
ALK-201ENST00000389048 H0YHG0 523 aa18.78■□□□□ 0.6
ALK-201ENST00000389048 SMC2O95347 1197 aa18.78■□□□□ 0.6
ALK-201ENST00000389048 DZIP1LQ8IYY4 767 aaKnown RBP18.78■□□□□ 0.6
ALK-201ENST00000389048 IL27Q8NEV9 243 aa18.78■□□□□ 0.6
ALK-201ENST00000389048 CCDC73Q6ZRK6 1079 aa18.77■□□□□ 0.6
ALK-201ENST00000389048 BRPF3Q9ULD4 1205 aa18.77■□□□□ 0.6
ALK-201ENST00000389048 NFKBIBQ15653 356 aa18.77■□□□□ 0.6
ALK-201ENST00000389048 CAVIN1Q6NZI2 390 aaKnown RBP18.76■□□□□ 0.59
ALK-201ENST00000389048 C22orf23Q9BZE7 217 aa18.76■□□□□ 0.59
ALK-201ENST00000389048 NASPP49321 788 aaPredicted RBP18.76■□□□□ 0.59
ALK-201ENST00000389048 ARGLU1Q9NWB6 273 aaPredicted RBP18.76■□□□□ 0.59
ALK-201ENST00000389048 HSP90B2PQ58FF3 399 aa18.76■□□□□ 0.59
ALK-201ENST00000389048 NOM1Q5C9Z4 860 aaKnown RBP18.75■□□□□ 0.59
ALK-201ENST00000389048 INTS3Q68E01 1043 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 367.3 ms