RNA–Protein interactions for RNA: ENST00000384344.1

RNU6-39P-201, Transcript of RNA, U6 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU6-39P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-39P-201ENST00000384344 ZFRQ96KR1 1074 aaKnown RBP7.35□□□□□ -1.23
RNU6-39P-201ENST00000384344 TMEM134Q9H6X4 195 aa7.35□□□□□ -1.23
RNU6-39P-201ENST00000384344 GPCPD1Q9NPB8 672 aa7.35□□□□□ -1.23
RNU6-39P-201ENST00000384344 SLF2Q8IX21 1173 aa7.34□□□□□ -1.23
RNU6-39P-201ENST00000384344 DAXXQ9UER7 740 aaPredicted RBP7.34□□□□□ -1.23
RNU6-39P-201ENST00000384344 C3orf80F5H4A9 247 aa7.33□□□□□ -1.24
RNU6-39P-201ENST00000384344 RNF40O75150 1001 aa7.33□□□□□ -1.24
RNU6-39P-201ENST00000384344 WNT2BQ93097 391 aa7.33□□□□□ -1.24
RNU6-39P-201ENST00000384344 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.33□□□□□ -1.24
RNU6-39P-201ENST00000384344 SWT1Q5T5J6 900 aaKnown RBP7.32□□□□□ -1.24
RNU6-39P-201ENST00000384344 SAMD7Q7Z3H4 446 aa7.32□□□□□ -1.24
RNU6-39P-201ENST00000384344 PHOX2BQ99453 314 aa7.32□□□□□ -1.24
RNU6-39P-201ENST00000384344 GIGYF2Q6Y7W6 1299 aaKnown RBP7.31□□□□□ -1.24
RNU6-39P-201ENST00000384344 PARP9Q8IXQ6 854 aa7.31□□□□□ -1.24
RNU6-39P-201ENST00000384344 MYT1LQ9UL68 1186 aa7.31□□□□□ -1.24
RNU6-39P-201ENST00000384344 RDH13Q8NBN7 331 aa7.3□□□□□ -1.24
RNU6-39P-201ENST00000384344 NLRP7Q8WX94 980 aa7.3□□□□□ -1.24
RNU6-39P-201ENST00000384344 DDX11L8A8MPP1 907 aa7.29□□□□□ -1.24
RNU6-39P-201ENST00000384344 KCTD12Q96CX2 325 aaKnown RBP7.29□□□□□ -1.24
RNU6-39P-201ENST00000384344 PRR14Q9BWN1 585 aa7.29□□□□□ -1.24
RNU6-39P-201ENST00000384344 SOWAHBA6NEL2 793 aa7.28□□□□□ -1.24
RNU6-39P-201ENST00000384344 BRPF1P55201 1214 aaPredicted RBP7.28□□□□□ -1.24
RNU6-39P-201ENST00000384344 PPP4CP60510 307 aa7.28□□□□□ -1.24
RNU6-39P-201ENST00000384344 KDM4CQ9H3R0 1056 aa7.28□□□□□ -1.24
RNU6-39P-201ENST00000384344 FAM217BQ9NTX9 383 aaPredicted RBP7.28□□□□□ -1.24
RNU6-39P-201ENST00000384344 SSTR3P32745 418 aaPredicted RBP7.27□□□□□ -1.25
RNU6-39P-201ENST00000384344 DDRGK1Q96HY6 314 aa7.27□□□□□ -1.25
RNU6-39P-201ENST00000384344 TMUB1Q9BVT8 246 aa7.27□□□□□ -1.25
RNU6-39P-201ENST00000384344 GPBP1L1Q9HC44 474 aaPredicted RBP7.27□□□□□ -1.25
RNU6-39P-201ENST00000384344 TSR3Q9UJK0 312 aaKnown RBP7.27□□□□□ -1.25
RNU6-39P-201ENST00000384344 KMT5BQ4FZB7 885 aa7.26□□□□□ -1.25
RNU6-39P-201ENST00000384344 HPS5Q9UPZ3 1129 aa7.26□□□□□ -1.25
RNU6-39P-201ENST00000384344 BCAMP50895 628 aa7.25□□□□□ -1.25
RNU6-39P-201ENST00000384344 DIXDC1Q155Q3 683 aa7.25□□□□□ -1.25
RNU6-39P-201ENST00000384344 THSD4Q6ZMP0 1018 aa7.25□□□□□ -1.25
RNU6-39P-201ENST00000384344 NYAP1Q6ZVC0 841 aa7.25□□□□□ -1.25
RNU6-39P-201ENST00000384344 RNF166Q96A37 237 aaPredicted RBP7.25□□□□□ -1.25
RNU6-39P-201ENST00000384344 NUTM1Q86Y26 1132 aa7.24□□□□□ -1.25
RNU6-39P-201ENST00000384344 BEGAINQ9BUH8 593 aa7.24□□□□□ -1.25
RNU6-39P-201ENST00000384344 CFHP08603 1231 aa7.23□□□□□ -1.25
RNU6-39P-201ENST00000384344 CD46P15529 392 aa7.23□□□□□ -1.25
RNU6-39P-201ENST00000384344 GRIPAP1Q4V328 841 aa7.23□□□□□ -1.25
RNU6-39P-201ENST00000384344 REPIN1Q9BWE0 567 aaKnown RBP7.23□□□□□ -1.25
RNU6-39P-201ENST00000384344 MS4A1P11836 297 aa7.22□□□□□ -1.25
RNU6-39P-201ENST00000384344 PTPN5P54829 565 aa7.22□□□□□ -1.25
RNU6-39P-201ENST00000384344 GCGRP47871 477 aa7.21□□□□□ -1.26
RNU6-39P-201ENST00000384344 USP46P62068 366 aa7.21□□□□□ -1.26
RNU6-39P-201ENST00000384344 RSPH6AQ9H0K4 717 aa7.21□□□□□ -1.26
RNU6-39P-201ENST00000384344 HCSTQ9UBK5 93 aa7.21□□□□□ -1.26
RNU6-39P-201ENST00000384344 KDM4AO75164 1064 aa7.2□□□□□ -1.26
RNU6-39P-201ENST00000384344 SLC10A3P09131 477 aa7.2□□□□□ -1.26
RNU6-39P-201ENST00000384344 WBP1LQ9NX94 342 aa7.2□□□□□ -1.26
RNU6-39P-201ENST00000384344 IL27Q8NEV9 243 aa7.19□□□□□ -1.26
RNU6-39P-201ENST00000384344 FAM117AQ9C073 453 aa7.19□□□□□ -1.26
RNU6-39P-201ENST00000384344 ACTN4O43707 911 aaKnown RBP7.18□□□□□ -1.26
RNU6-39P-201ENST00000384344 ATP1B4Q9UN42 357 aaPredicted RBP7.18□□□□□ -1.26
RNU6-39P-201ENST00000384344 PCDHB3Q9Y5E6 796 aa7.17□□□□□ -1.26
RNU6-39P-201ENST00000384344 ATP6V1AP38606 617 aa7.16□□□□□ -1.26
RNU6-39P-201ENST00000384344 TBC1D2Q9BYX2 928 aa7.16□□□□□ -1.26
RNU6-39P-201ENST00000384344 NR1I2O75469 434 aa7.15□□□□□ -1.26
RNU6-39P-201ENST00000384344 APLP1P51693 650 aa7.15□□□□□ -1.26
RNU6-39P-201ENST00000384344 FUT2Q10981 343 aa7.15□□□□□ -1.26
RNU6-39P-201ENST00000384344 TMEM132AQ24JP5 1023 aa7.15□□□□□ -1.26
RNU6-39P-201ENST00000384344 SPIRE2Q8WWL2 714 aa7.15□□□□□ -1.26
RNU6-39P-201ENST00000384344 SH3D19Q5HYK7 790 aa7.14□□□□□ -1.27
RNU6-39P-201ENST00000384344 PLEKHG3A1L390 1219 aa7.13□□□□□ -1.27
RNU6-39P-201ENST00000384344 HOXA2O43364 376 aa7.13□□□□□ -1.27
RNU6-39P-201ENST00000384344 GJA5P36382 358 aa7.13□□□□□ -1.27
RNU6-39P-201ENST00000384344 Q3C1V9 767 aa7.13□□□□□ -1.27
RNU6-39P-201ENST00000384344 PCMTD1Q96MG8 357 aaPredicted RBP7.13□□□□□ -1.27
RNU6-39P-201ENST00000384344 GOPCQ9HD26 462 aa7.13□□□□□ -1.27
RNU6-39P-201ENST00000384344 SKIV2LQ15477 1246 aaKnown RBP7.12□□□□□ -1.27
RNU6-39P-201ENST00000384344 MYSM1Q5VVJ2 828 aa7.12□□□□□ -1.27
RNU6-39P-201ENST00000384344 RIC3Q7Z5B4 369 aa7.12□□□□□ -1.27
RNU6-39P-201ENST00000384344 FDX1P10109 184 aa7.11□□□□□ -1.27
RNU6-39P-201ENST00000384344 CLK2P49760 499 aaKnown RBP7.11□□□□□ -1.27
RNU6-39P-201ENST00000384344 MOXD2PA6NHM9 499 aa7.1□□□□□ -1.27
RNU6-39P-201ENST00000384344 COPS2P61201 443 aa7.1□□□□□ -1.27
RNU6-39P-201ENST00000384344 PUS10Q3MIT2 529 aaKnown RBP7.1□□□□□ -1.27
RNU6-39P-201ENST00000384344 MORN1Q5T089 497 aa7.1□□□□□ -1.27
RNU6-39P-201ENST00000384344 RSBN1LQ6PCB5 846 aaPredicted RBP7.1□□□□□ -1.27
RNU6-39P-201ENST00000384344 IL21Q9HBE4 155 aa7.1□□□□□ -1.27
RNU6-39P-201ENST00000384344 POLR3EQ9NVU0 708 aa7.1□□□□□ -1.27
RNU6-39P-201ENST00000384344 SPTLC1O15269 473 aa7.09□□□□□ -1.27
RNU6-39P-201ENST00000384344 BLOC1S3Q6QNY0 202 aa7.09□□□□□ -1.27
RNU6-39P-201ENST00000384344 MTRQ99707 1265 aa7.09□□□□□ -1.27
RNU6-39P-201ENST00000384344 SPDYE5A6NIY4 337 aa7.08□□□□□ -1.28
RNU6-39P-201ENST00000384344 FMNL1O95466 1100 aaPredicted RBP7.08□□□□□ -1.28
RNU6-39P-201ENST00000384344 NDUFV2P19404 249 aa7.08□□□□□ -1.28
RNU6-39P-201ENST00000384344 TUSC1Q2TAM9 212 aa7.08□□□□□ -1.28
RNU6-39P-201ENST00000384344 NUTM2BA6NNL0 878 aaPredicted RBP7.07□□□□□ -1.28
RNU6-39P-201ENST00000384344 NUTM2EB1AL46 878 aaPredicted RBP7.07□□□□□ -1.28
RNU6-39P-201ENST00000384344 C6orf229H3BNL8 230 aa7.07□□□□□ -1.28
RNU6-39P-201ENST00000384344 KCNC4Q03721 635 aa7.07□□□□□ -1.28
RNU6-39P-201ENST00000384344 CSPP1Q1MSJ5 1256 aa7.07□□□□□ -1.28
RNU6-39P-201ENST00000384344 NUTM2DQ5VT03 806 aaPredicted RBP7.07□□□□□ -1.28
RNU6-39P-201ENST00000384344 NUTM2AQ8IVF1 878 aaPredicted RBP7.07□□□□□ -1.28
RNU6-39P-201ENST00000384344 ZBTB3Q9H5J0 574 aa7.07□□□□□ -1.28
RNU6-39P-201ENST00000384344 SLC27A5Q9Y2P5 690 aa7.07□□□□□ -1.28
RNU6-39P-201ENST00000384344 SALL2Q9Y467 1007 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms