RNA–Protein interactions for RNA: ENST00000381272.5

SMC6-202, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-202ENST00000381272 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.88□□□□□ -1.31
SMC6-202ENST00000381272 TMEM134Q9H6X4 195 aa6.88□□□□□ -1.31
SMC6-202ENST00000381272 MAP2K5Q13163 448 aa6.86□□□□□ -1.31
SMC6-202ENST00000381272 MINK1Q8N4C8 1332 aaPredicted RBP6.84□□□□□ -1.31
SMC6-202ENST00000381272 IRF6O14896 467 aa6.84□□□□□ -1.31
SMC6-202ENST00000381272 ITGBL1O95965 494 aaPredicted RBP6.83□□□□□ -1.32
SMC6-202ENST00000381272 IFFO2Q5TF58 517 aa6.83□□□□□ -1.32
SMC6-202ENST00000381272 BCANQ96GW7 911 aa6.83□□□□□ -1.32
SMC6-202ENST00000381272 PRR14Q9BWN1 585 aa6.83□□□□□ -1.32
SMC6-202ENST00000381272 APLP1P51693 650 aa6.82□□□□□ -1.32
SMC6-202ENST00000381272 RSPH4AQ5TD94 716 aa6.82□□□□□ -1.32
SMC6-202ENST00000381272 ZC3H15Q8WU90 426 aaKnown RBP6.82□□□□□ -1.32
SMC6-202ENST00000381272 PHOX2BQ99453 314 aa6.82□□□□□ -1.32
SMC6-202ENST00000381272 DAXXQ9UER7 740 aaPredicted RBP6.81□□□□□ -1.32
SMC6-202ENST00000381272 ZMYND10O75800 440 aa6.8□□□□□ -1.32
SMC6-202ENST00000381272 KCNC4Q03721 635 aa6.8□□□□□ -1.32
SMC6-202ENST00000381272 KRI1Q8N9T8 703 aaKnown RBP6.8□□□□□ -1.32
SMC6-202ENST00000381272 BARGINQ6ZT62 677 aa6.8□□□□□ -1.32
SMC6-202ENST00000381272 NLRP7Q8WX94 980 aa6.8□□□□□ -1.32
SMC6-202ENST00000381272 CCDC102AQ96A19 550 aa6.8□□□□□ -1.32
SMC6-202ENST00000381272 KMT5BQ4FZB7 885 aa6.79□□□□□ -1.32
SMC6-202ENST00000381272 CFHP08603 1231 aa6.78□□□□□ -1.32
SMC6-202ENST00000381272 SLC10A3P09131 477 aa6.78□□□□□ -1.32
SMC6-202ENST00000381272 TJAP1Q5JTD0 557 aa6.78□□□□□ -1.32
SMC6-202ENST00000381272 SULF1Q8IWU6 871 aa6.78□□□□□ -1.32
SMC6-202ENST00000381272 MTRQ99707 1265 aa6.78□□□□□ -1.32
SMC6-202ENST00000381272 DDX11L8A8MPP1 907 aa6.78□□□□□ -1.32
SMC6-202ENST00000381272 IL21Q9HBE4 155 aa6.78□□□□□ -1.32
SMC6-202ENST00000381272 RDH13Q8NBN7 331 aa6.77□□□□□ -1.33
SMC6-202ENST00000381272 PCDHB3Q9Y5E6 796 aa6.77□□□□□ -1.33
SMC6-202ENST00000381272 ACTN4O43707 911 aaKnown RBP6.76□□□□□ -1.33
SMC6-202ENST00000381272 MDM2Q00987 491 aaPredicted RBP6.76□□□□□ -1.33
SMC6-202ENST00000381272 A0A0G2JS52 829 aa6.75□□□□□ -1.33
SMC6-202ENST00000381272 COPS2P61201 443 aa6.75□□□□□ -1.33
SMC6-202ENST00000381272 CLCN1P35523 988 aa6.73□□□□□ -1.33
SMC6-202ENST00000381272 ZNF516Q92618 1163 aa6.73□□□□□ -1.33
SMC6-202ENST00000381272 BLOC1S3Q6QNY0 202 aa6.73□□□□□ -1.33
SMC6-202ENST00000381272 GPCPD1Q9NPB8 672 aa6.73□□□□□ -1.33
SMC6-202ENST00000381272 ZPR1O75312 459 aa6.72□□□□□ -1.33
SMC6-202ENST00000381272 GCGRP47871 477 aa6.72□□□□□ -1.33
SMC6-202ENST00000381272 NR1I2O75469 434 aa6.71□□□□□ -1.34
SMC6-202ENST00000381272 CD46P15529 392 aa6.71□□□□□ -1.34
SMC6-202ENST00000381272 AK7Q96M32 723 aa6.71□□□□□ -1.34
SMC6-202ENST00000381272 FUT2Q10981 343 aa6.7□□□□□ -1.34
SMC6-202ENST00000381272 TTLL12Q14166 644 aaPredicted RBP6.7□□□□□ -1.34
SMC6-202ENST00000381272 AMHR2Q16671 573 aa6.7□□□□□ -1.34
SMC6-202ENST00000381272 FAM217BQ9NTX9 383 aaPredicted RBP6.7□□□□□ -1.34
SMC6-202ENST00000381272 RGS20O76081 388 aa6.69□□□□□ -1.34
SMC6-202ENST00000381272 ATP6V1AP38606 617 aa6.69□□□□□ -1.34
SMC6-202ENST00000381272 PUS10Q3MIT2 529 aaKnown RBP6.69□□□□□ -1.34
SMC6-202ENST00000381272 TMUB1Q9BVT8 246 aa6.69□□□□□ -1.34
SMC6-202ENST00000381272 GRIPAP1Q4V328 841 aa6.69□□□□□ -1.34
SMC6-202ENST00000381272 NKX2-3Q8TAU0 364 aa6.69□□□□□ -1.34
SMC6-202ENST00000381272 TRIM66O15016 1216 aa6.68□□□□□ -1.34
SMC6-202ENST00000381272 SCUBE3Q8IX30 993 aa6.68□□□□□ -1.34
SMC6-202ENST00000381272 KDM4AO75164 1064 aa6.67□□□□□ -1.34
SMC6-202ENST00000381272 GGCXP38435 758 aa6.67□□□□□ -1.34
SMC6-202ENST00000381272 MORN1Q5T089 497 aa6.67□□□□□ -1.34
SMC6-202ENST00000381272 REPIN1Q9BWE0 567 aaKnown RBP6.67□□□□□ -1.34
SMC6-202ENST00000381272 SLC24A3Q9HC58 644 aa6.67□□□□□ -1.34
SMC6-202ENST00000381272 SSTR3P32745 418 aaPredicted RBP6.66□□□□□ -1.34
SMC6-202ENST00000381272 PPP1R18Q6NYC8 613 aa6.66□□□□□ -1.34
SMC6-202ENST00000381272 TLL1O43897 1013 aa6.66□□□□□ -1.34
SMC6-202ENST00000381272 GIGYF2Q6Y7W6 1299 aaKnown RBP6.66□□□□□ -1.34
SMC6-202ENST00000381272 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.66□□□□□ -1.34
SMC6-202ENST00000381272 ADH1BP00325 375 aa6.65□□□□□ -1.34
SMC6-202ENST00000381272 USP46P62068 366 aa6.65□□□□□ -1.34
SMC6-202ENST00000381272 PARP9Q8IXQ6 854 aa6.64□□□□□ -1.35
SMC6-202ENST00000381272 SLC27A5Q9Y2P5 690 aa6.64□□□□□ -1.35
SMC6-202ENST00000381272 NUTM1Q86Y26 1132 aa6.64□□□□□ -1.35
SMC6-202ENST00000381272 SPSB2Q99619 263 aa6.64□□□□□ -1.35
SMC6-202ENST00000381272 FMNL1O95466 1100 aaPredicted RBP6.63□□□□□ -1.35
SMC6-202ENST00000381272 PDE4DQ08499 809 aa6.63□□□□□ -1.35
SMC6-202ENST00000381272 SALL2Q9Y467 1007 aaPredicted RBP6.63□□□□□ -1.35
SMC6-202ENST00000381272 Q3C1V9 767 aa6.62□□□□□ -1.35
SMC6-202ENST00000381272 HOXA2O43364 376 aa6.62□□□□□ -1.35
SMC6-202ENST00000381272 THAP11Q96EK4 314 aa6.62□□□□□ -1.35
SMC6-202ENST00000381272 SLC6A16Q9GZN6 736 aa6.62□□□□□ -1.35
SMC6-202ENST00000381272 S1PR4O95977 384 aa6.61□□□□□ -1.35
SMC6-202ENST00000381272 BEGAINQ9BUH8 593 aa6.61□□□□□ -1.35
SMC6-202ENST00000381272 RNF223E7ERA6 249 aa6.6□□□□□ -1.35
SMC6-202ENST00000381272 BRICD5Q6PL45 260 aa6.6□□□□□ -1.35
SMC6-202ENST00000381272 MS4A1P11836 297 aa6.59□□□□□ -1.35
SMC6-202ENST00000381272 DIXDC1Q155Q3 683 aa6.59□□□□□ -1.35
SMC6-202ENST00000381272 RNF19BQ6ZMZ0 732 aa6.59□□□□□ -1.35
SMC6-202ENST00000381272 ANKLE1Q8NAG6 615 aa6.59□□□□□ -1.35
SMC6-202ENST00000381272 SPIRE2Q8WWL2 714 aa6.59□□□□□ -1.35
SMC6-202ENST00000381272 HLA-CQ95604 372 aa6.59□□□□□ -1.35
SMC6-202ENST00000381272 PRKD2Q9BZL6 878 aa6.59□□□□□ -1.35
SMC6-202ENST00000381272 V9GY48 417 aaPredicted RBP6.58□□□□□ -1.36
SMC6-202ENST00000381272 FAM160A2Q8N612 972 aaPredicted RBP6.57□□□□□ -1.36
SMC6-202ENST00000381272 PPEF1O14829 653 aaPredicted RBP6.57□□□□□ -1.36
SMC6-202ENST00000381272 FDX1P10109 184 aa6.57□□□□□ -1.36
SMC6-202ENST00000381272 GUCA2AQ02747 115 aa6.57□□□□□ -1.36
SMC6-202ENST00000381272 MSS51Q4VC12 460 aa6.57□□□□□ -1.36
SMC6-202ENST00000381272 USB1Q9BQ65 265 aaKnown RBP6.57□□□□□ -1.36
SMC6-202ENST00000381272 MOXD2PA6NHM9 499 aa6.55□□□□□ -1.36
SMC6-202ENST00000381272 TBC1D2Q9BYX2 928 aa6.55□□□□□ -1.36
SMC6-202ENST00000381272 NDUFV2P19404 249 aa6.55□□□□□ -1.36
SMC6-202ENST00000381272 PRDM9Q9NQV7 894 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms