RNA–Protein interactions for RNA: ENST00000378823.7

RAD50-201, Transcript of RAD50 double strand break repair protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD50, Length 8,306 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-201ENST00000378823 CALRP27797 417 aaKnown RBP13.67□□□□□ -0.22
RAD50-201ENST00000378823 BCL2L13Q9BXK5 485 aa13.67□□□□□ -0.22
RAD50-201ENST00000378823 FAM13BQ9NYF5 915 aa13.66□□□□□ -0.22
RAD50-201ENST00000378823 NOM1Q5C9Z4 860 aaKnown RBP13.66□□□□□ -0.22
RAD50-201ENST00000378823 RNF20Q5VTR2 975 aa13.66□□□□□ -0.22
RAD50-201ENST00000378823 NOL10Q9BSC4 688 aaKnown RBP13.66□□□□□ -0.22
RAD50-201ENST00000378823 KIF3BO15066 747 aa13.65□□□□□ -0.22
RAD50-201ENST00000378823 AK7Q96M32 723 aa13.65□□□□□ -0.22
RAD50-201ENST00000378823 CPLX1O14810 134 aa13.65□□□□□ -0.22
RAD50-201ENST00000378823 RSPH4AQ5TD94 716 aa13.65□□□□□ -0.22
RAD50-201ENST00000378823 WASHC2CQ9Y4E1 1318 aa13.65□□□□□ -0.22
RAD50-201ENST00000378823 SLC4A3P48751 1232 aa13.65□□□□□ -0.22
RAD50-201ENST00000378823 DDX19BQ9UMR2 479 aa13.65□□□□□ -0.22
RAD50-201ENST00000378823 SASS6Q6UVJ0 657 aa13.64□□□□□ -0.23
RAD50-201ENST00000378823 BICD2Q8TD16 824 aa13.64□□□□□ -0.23
RAD50-201ENST00000378823 PLIN1O60240 522 aa13.64□□□□□ -0.23
RAD50-201ENST00000378823 TRDNQ13061 729 aa13.64□□□□□ -0.23
RAD50-201ENST00000378823 TRIM34Q9BYJ4 488 aa13.64□□□□□ -0.23
RAD50-201ENST00000378823 WWC1Q8IX03 1113 aa13.64□□□□□ -0.23
RAD50-201ENST00000378823 APPP05067 770 aa13.64□□□□□ -0.23
RAD50-201ENST00000378823 PANK3Q9H999 370 aa13.64□□□□□ -0.23
RAD50-201ENST00000378823 CRBNQ96SW2 442 aa13.63□□□□□ -0.23
RAD50-201ENST00000378823 ARGLU1Q9NWB6 273 aaPredicted RBP13.63□□□□□ -0.23
RAD50-201ENST00000378823 FAM43AQ8N2R8 423 aa13.63□□□□□ -0.23
RAD50-201ENST00000378823 CDR1P51861 262 aa13.62□□□□□ -0.23
RAD50-201ENST00000378823 ACBD3Q9H3P7 528 aa13.62□□□□□ -0.23
RAD50-201ENST00000378823 ANO2Q9NQ90 1003 aa13.62□□□□□ -0.23
RAD50-201ENST00000378823 NUCB2P80303 420 aa13.62□□□□□ -0.23
RAD50-201ENST00000378823 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
RAD50-201ENST00000378823 EVC2Q86UK5 1308 aa13.61□□□□□ -0.23
RAD50-201ENST00000378823 TEFQ10587 303 aa13.61□□□□□ -0.23
RAD50-201ENST00000378823 COG3Q96JB2 828 aa13.61□□□□□ -0.23
RAD50-201ENST00000378823 VPS37DQ86XT2 251 aa13.61□□□□□ -0.23
RAD50-201ENST00000378823 TRAK1Q9UPV9 953 aa13.61□□□□□ -0.23
RAD50-201ENST00000378823 ST20-MTHFSA0A0A6YYL1 179 aa13.61□□□□□ -0.23
RAD50-201ENST00000378823 NAT10Q9H0A0 1025 aaKnown RBP13.61□□□□□ -0.23
RAD50-201ENST00000378823 CHMP5Q9NZZ3 219 aa13.61□□□□□ -0.23
RAD50-201ENST00000378823 CCDC88BA6NC98 1476 aa13.61□□□□□ -0.23
RAD50-201ENST00000378823 HSP90B2PQ58FF3 399 aa13.61□□□□□ -0.23
RAD50-201ENST00000378823 ELL2O00472 640 aaPredicted RBP13.61□□□□□ -0.23
RAD50-201ENST00000378823 IFIT2P09913 472 aaKnown RBP13.61□□□□□ -0.23
RAD50-201ENST00000378823 HNRNPMP52272 730 aaKnown RBP eCLIP13.6□□□□□ -0.23
RAD50-201ENST00000378823 ERICH2A1L162 156 aa13.6□□□□□ -0.23
RAD50-201ENST00000378823 IFT57Q9NWB7 429 aa13.6□□□□□ -0.23
RAD50-201ENST00000378823 COG6Q9Y2V7 657 aa13.6□□□□□ -0.23
RAD50-201ENST00000378823 INTS3Q68E01 1043 aaKnown RBP13.6□□□□□ -0.23
RAD50-201ENST00000378823 NUTM2DQ5VT03 806 aaPredicted RBP13.59□□□□□ -0.23
RAD50-201ENST00000378823 USP47Q96K76 1375 aa13.59□□□□□ -0.23
RAD50-201ENST00000378823 NUTM2FA1L443 756 aa13.59□□□□□ -0.23
RAD50-201ENST00000378823 NAP1L1P55209 391 aaKnown RBP13.59□□□□□ -0.23
RAD50-201ENST00000378823 MTERF4Q7Z6M4 381 aaKnown RBP13.59□□□□□ -0.23
RAD50-201ENST00000378823 RAD21O60216 631 aa13.59□□□□□ -0.23
RAD50-201ENST00000378823 SMC3Q9UQE7 1217 aa13.59□□□□□ -0.23
RAD50-201ENST00000378823 ODF2Q5BJF6 829 aa13.58□□□□□ -0.23
RAD50-201ENST00000378823 CTDP1Q9Y5B0 961 aaPredicted RBP13.58□□□□□ -0.23
RAD50-201ENST00000378823 TTC5Q8N0Z6 440 aa13.58□□□□□ -0.24
RAD50-201ENST00000378823 EPS15P42566 896 aa13.58□□□□□ -0.24
RAD50-201ENST00000378823 SAFBQ15424 915 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAD50-201ENST00000378823 NFXL1Q6ZNB6 911 aa13.58□□□□□ -0.24
RAD50-201ENST00000378823 EVA1CP58658 441 aa13.58□□□□□ -0.24
RAD50-201ENST00000378823 MNS1Q8NEH6 495 aa13.58□□□□□ -0.24
RAD50-201ENST00000378823 EXOC6Q8TAG9 804 aa13.58□□□□□ -0.24
RAD50-201ENST00000378823 CCDC43Q96MW1 224 aaKnown RBP13.58□□□□□ -0.24
RAD50-201ENST00000378823 NGEFQ8N5V2 710 aa13.58□□□□□ -0.24
RAD50-201ENST00000378823 CT47A1Q5JQC4 288 aaPredicted RBP13.57□□□□□ -0.24
RAD50-201ENST00000378823 VPS37CA5D8V6 355 aaPredicted RBP13.57□□□□□ -0.24
RAD50-201ENST00000378823 DDX58O95786 925 aaKnown RBP13.57□□□□□ -0.24
RAD50-201ENST00000378823 FBXO3Q9UK99 471 aa13.57□□□□□ -0.24
RAD50-201ENST00000378823 NASPP49321 788 aaPredicted RBP13.56□□□□□ -0.24
RAD50-201ENST00000378823 MAP7D2Q96T17 732 aa13.56□□□□□ -0.24
RAD50-201ENST00000378823 CCDC73Q6ZRK6 1079 aa13.56□□□□□ -0.24
RAD50-201ENST00000378823 PDS5BQ9NTI5 1447 aa13.56□□□□□ -0.24
RAD50-201ENST00000378823 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
RAD50-201ENST00000378823 DZIP1LQ8IYY4 767 aaKnown RBP13.56□□□□□ -0.24
RAD50-201ENST00000378823 CWC15Q9P013 229 aaKnown RBP13.56□□□□□ -0.24
RAD50-201ENST00000378823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.55□□□□□ -0.24
RAD50-201ENST00000378823 CECR2Q9BXF3 1484 aa13.55□□□□□ -0.24
RAD50-201ENST00000378823 DHX16O60231 1041 aaKnown RBP13.55□□□□□ -0.24
RAD50-201ENST00000378823 PRKRIP1Q9H875 184 aaPredicted RBP13.55□□□□□ -0.24
RAD50-201ENST00000378823 OLFM4Q6UX06 510 aa13.55□□□□□ -0.24
RAD50-201ENST00000378823 EIF2S2P20042 333 aaKnown RBP13.55□□□□□ -0.24
RAD50-201ENST00000378823 G3BP1Q13283 466 aaKnown RBP eCLIP13.54□□□□□ -0.24
RAD50-201ENST00000378823 DCTN1Q14203 1278 aa13.54□□□□□ -0.24
RAD50-201ENST00000378823 FBXW7Q969H0 707 aa13.54□□□□□ -0.24
RAD50-201ENST00000378823 ERC2O15083 957 aa13.54□□□□□ -0.24
RAD50-201ENST00000378823 MYO6Q9UM54 1294 aa13.54□□□□□ -0.24
RAD50-201ENST00000378823 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
RAD50-201ENST00000378823 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.54□□□□□ -0.24
RAD50-201ENST00000378823 NINLQ9Y2I6 1382 aa13.53□□□□□ -0.24
RAD50-201ENST00000378823 C22orf23Q9BZE7 217 aa13.53□□□□□ -0.24
RAD50-201ENST00000378823 CCDC39Q9UFE4 941 aa13.53□□□□□ -0.24
RAD50-201ENST00000378823 RAPGEF2Q9Y4G8 1499 aa13.53□□□□□ -0.24
RAD50-201ENST00000378823 RALYLQ86SE5 291 aaKnown RBP13.53□□□□□ -0.24
RAD50-201ENST00000378823 API5Q9BZZ5 524 aaKnown RBP13.53□□□□□ -0.24
RAD50-201ENST00000378823 BRMS1Q9HCU9 246 aa13.52□□□□□ -0.24
RAD50-201ENST00000378823 CCDC191Q8NCU4 936 aa13.52□□□□□ -0.24
RAD50-201ENST00000378823 RDXP35241 583 aaKnown RBP13.52□□□□□ -0.25
RAD50-201ENST00000378823 VGFO15240 615 aaPredicted RBP13.52□□□□□ -0.25
RAD50-201ENST00000378823 AAMPQ13685 434 aa13.51□□□□□ -0.25
RAD50-201ENST00000378823 APAF1O14727 1248 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms