RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 PLEKHG1Q9ULL1 1385 aa28.76■■■□□ 2.2
TMEM88B-201ENST00000378821 HSPA1LP34931 641 aa28.76■■■□□ 2.19
TMEM88B-201ENST00000378821 HDGFP51858 240 aaKnown RBP28.76■■■□□ 2.19
TMEM88B-201ENST00000378821 SLC26A8Q96RN1 970 aa28.76■■■□□ 2.19
TMEM88B-201ENST00000378821 NAIPQ13075 1403 aa28.75■■■□□ 2.19
TMEM88B-201ENST00000378821 NWD1Q149M9 1564 aa28.75■■■□□ 2.19
TMEM88B-201ENST00000378821 SCAF1Q9H7N4 1312 aaKnown RBP28.72■■■□□ 2.19
TMEM88B-201ENST00000378821 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.7■■■□□ 2.18
TMEM88B-201ENST00000378821 NKTRP30414 1462 aaKnown RBP28.7■■■□□ 2.18
TMEM88B-201ENST00000378821 CHD2O14647 1828 aaKnown RBP28.69■■■□□ 2.18
TMEM88B-201ENST00000378821 SPHKAPQ2M3C7 1700 aa28.69■■■□□ 2.18
TMEM88B-201ENST00000378821 TMEM94Q12767 1356 aa28.67■■■□□ 2.18
TMEM88B-201ENST00000378821 TBX22Q9Y458 520 aa28.67■■■□□ 2.18
TMEM88B-201ENST00000378821 ILDR2Q71H61 639 aa28.66■■■□□ 2.18
TMEM88B-201ENST00000378821 HFM1A2PYH4 1435 aa28.66■■■□□ 2.18
TMEM88B-201ENST00000378821 ADAMTS13Q76LX8 1427 aa28.63■■■□□ 2.17
TMEM88B-201ENST00000378821 PPP1R15AO75807 674 aaPredicted RBP28.63■■■□□ 2.17
TMEM88B-201ENST00000378821 CHGAP10645 457 aaKnown RBP28.63■■■□□ 2.17
TMEM88B-201ENST00000378821 PROSER2Q86WR7 435 aaPredicted RBP28.62■■■□□ 2.17
TMEM88B-201ENST00000378821 DIP2AQ14689 1571 aa28.62■■■□□ 2.17
TMEM88B-201ENST00000378821 BCANQ96GW7 911 aa28.61■■■□□ 2.17
TMEM88B-201ENST00000378821 FAM135BQ49AJ0 1406 aa28.6■■■□□ 2.17
TMEM88B-201ENST00000378821 PIK3R4Q99570 1358 aa28.59■■■□□ 2.17
TMEM88B-201ENST00000378821 TRPM2O94759 1503 aa28.58■■■□□ 2.17
TMEM88B-201ENST00000378821 MED1Q15648 1581 aaPredicted RBP28.56■■■□□ 2.16
TMEM88B-201ENST00000378821 NCOA3Q9Y6Q9 1424 aa28.56■■■□□ 2.16
TMEM88B-201ENST00000378821 CLTCL1P53675 1640 aa28.54■■■□□ 2.16
TMEM88B-201ENST00000378821 NUTM2DQ5VT03 806 aaPredicted RBP28.54■■■□□ 2.16
TMEM88B-201ENST00000378821 RBM33Q96EV2 1170 aaKnown RBP28.52■■■□□ 2.16
TMEM88B-201ENST00000378821 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
TMEM88B-201ENST00000378821 SETBP1Q9Y6X0 1596 aa28.52■■■□□ 2.16
TMEM88B-201ENST00000378821 NRXN3Q9Y4C0 1643 aa28.51■■■□□ 2.15
TMEM88B-201ENST00000378821 MSH6P52701 1360 aa28.5■■■□□ 2.15
TMEM88B-201ENST00000378821 KIF1BO60333 1816 aa28.48■■■□□ 2.15
TMEM88B-201ENST00000378821 ROBO1Q9Y6N7 1651 aa28.47■■■□□ 2.15
TMEM88B-201ENST00000378821 NEXMIFQ5QGS0 1516 aa28.47■■■□□ 2.15
TMEM88B-201ENST00000378821 SOCS7O14512 581 aa28.46■■■□□ 2.15
TMEM88B-201ENST00000378821 PTPRUQ92729 1446 aa28.45■■■□□ 2.15
TMEM88B-201ENST00000378821 TRIM52Q96A61 297 aa28.44■■■□□ 2.14
TMEM88B-201ENST00000378821 SLAIN2Q9P270 581 aa28.43■■■□□ 2.14
TMEM88B-201ENST00000378821 ZNF326Q5BKZ1 582 aaKnown RBP28.42■■■□□ 2.14
TMEM88B-201ENST00000378821 XRN1Q8IZH2 1706 aaKnown RBP28.41■■■□□ 2.14
TMEM88B-201ENST00000378821 SLC4A1APQ9BWU0 796 aaKnown RBP28.41■■■□□ 2.14
TMEM88B-201ENST00000378821 AMOTL2Q9Y2J4 779 aa28.41■■■□□ 2.14
TMEM88B-201ENST00000378821 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.39■■■□□ 2.14
TMEM88B-201ENST00000378821 C19orf44Q9H6X5 657 aa28.38■■■□□ 2.13
TMEM88B-201ENST00000378821 METP08581 1390 aa28.37■■■□□ 2.13
TMEM88B-201ENST00000378821 RPGRIP1LQ68CZ1 1315 aa28.34■■■□□ 2.13
TMEM88B-201ENST00000378821 CADPS2Q86UW7 1296 aa28.33■■■□□ 2.13
TMEM88B-201ENST00000378821 VGFO15240 615 aaPredicted RBP28.31■■■□□ 2.12
TMEM88B-201ENST00000378821 SETD1AO15047 1707 aaKnown RBP28.3■■■□□ 2.12
TMEM88B-201ENST00000378821 DCCP43146 1447 aa28.3■■■□□ 2.12
TMEM88B-201ENST00000378821 ACIN1Q9UKV3 1341 aaKnown RBP28.3■■■□□ 2.12
TMEM88B-201ENST00000378821 PPLO60437 1756 aa28.29■■■□□ 2.12
TMEM88B-201ENST00000378821 PHLPP1O60346 1717 aa28.29■■■□□ 2.12
TMEM88B-201ENST00000378821 C14orf37Q86TY3 774 aa28.28■■■□□ 2.12
TMEM88B-201ENST00000378821 ATF3P18847 181 aa28.27■■■□□ 2.12
TMEM88B-201ENST00000378821 MPHOSPH9Q99550 1183 aa28.27■■■□□ 2.12
TMEM88B-201ENST00000378821 FOXD1Q16676 465 aa28.25■■■□□ 2.11
TMEM88B-201ENST00000378821 PHF23Q9BUL5 403 aaPredicted RBP28.25■■■□□ 2.11
TMEM88B-201ENST00000378821 PRAG1Q86YV5 1406 aa28.25■■■□□ 2.11
TMEM88B-201ENST00000378821 COL16A1Q07092 1604 aaPredicted RBP28.25■■■□□ 2.11
TMEM88B-201ENST00000378821 AHDC1Q5TGY3 1603 aaPredicted RBP28.23■■■□□ 2.11
TMEM88B-201ENST00000378821 SPATA31E1Q6ZUB1 1445 aa28.22■■■□□ 2.11
TMEM88B-201ENST00000378821 RGS17Q9UGC6 210 aaPredicted RBP28.22■■■□□ 2.11
TMEM88B-201ENST00000378821 SETD5Q9C0A6 1442 aa28.21■■■□□ 2.11
TMEM88B-201ENST00000378821 CCDC144AA2RUR9 1427 aa28.2■■■□□ 2.11
TMEM88B-201ENST00000378821 ADGRL3Q9HAR2 1447 aa28.19■■■□□ 2.1
TMEM88B-201ENST00000378821 JCADQ9P266 1359 aa28.19■■■□□ 2.1
TMEM88B-201ENST00000378821 PTCH1Q13635 1447 aa28.18■■■□□ 2.1
TMEM88B-201ENST00000378821 MST1RQ04912 1400 aa28.18■■■□□ 2.1
TMEM88B-201ENST00000378821 NALCNQ8IZF0 1738 aa28.17■■■□□ 2.1
TMEM88B-201ENST00000378821 IFT172Q9UG01 1749 aa28.17■■■□□ 2.1
TMEM88B-201ENST00000378821 BRINP3Q76B58 766 aa28.16■■■□□ 2.1
TMEM88B-201ENST00000378821 ANKRD30BQ9BXX2 1392 aa28.12■■■□□ 2.09
TMEM88B-201ENST00000378821 ROBO2Q9HCK4 1378 aa28.12■■■□□ 2.09
TMEM88B-201ENST00000378821 ASXL1Q8IXJ9 1541 aa28.12■■■□□ 2.09
TMEM88B-201ENST00000378821 SHPRHQ149N8 1683 aa28.1■■■□□ 2.09
TMEM88B-201ENST00000378821 ADGRF5Q8IZF2 1346 aa28.1■■■□□ 2.09
TMEM88B-201ENST00000378821 NHSL1Q5SYE7 1610 aa28.09■■■□□ 2.09
TMEM88B-201ENST00000378821 RAB3GAP2Q9H2M9 1393 aa28.09■■■□□ 2.09
TMEM88B-201ENST00000378821 SPATA31A6Q5VVP1 1343 aa28.08■■■□□ 2.09
TMEM88B-201ENST00000378821 RGL3Q3MIN7 710 aa28.07■■■□□ 2.08
TMEM88B-201ENST00000378821 PIK3C2GO75747 1445 aa28.04■■■□□ 2.08
TMEM88B-201ENST00000378821 LAMC1P11047 1609 aa28.03■■■□□ 2.08
TMEM88B-201ENST00000378821 C1orf167Q5SNV9 1468 aa28.03■■■□□ 2.08
TMEM88B-201ENST00000378821 TECPR2O15040 1411 aa28.03■■■□□ 2.08
TMEM88B-201ENST00000378821 POTEAQ6S8J7 498 aa28.02■■■□□ 2.08
TMEM88B-201ENST00000378821 LRP6O75581 1613 aa28.02■■■□□ 2.08
TMEM88B-201ENST00000378821 HRCP23327 699 aa28.01■■■□□ 2.07
TMEM88B-201ENST00000378821 NRXN1Q9ULB1 1477 aa28■■■□□ 2.07
TMEM88B-201ENST00000378821 LRPPRCP42704 1394 aaKnown RBP27.99■■■□□ 2.07
TMEM88B-201ENST00000378821 ABCC11Q96J66 1382 aa27.99■■■□□ 2.07
TMEM88B-201ENST00000378821 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
TMEM88B-201ENST00000378821 MYOM2P54296 1465 aa27.96■■■□□ 2.07
TMEM88B-201ENST00000378821 LRRC59Q96AG4 307 aaKnown RBP27.96■■■□□ 2.07
TMEM88B-201ENST00000378821 CDC42BPGQ6DT37 1551 aa27.95■■■□□ 2.07
TMEM88B-201ENST00000378821 C14orf93Q9H972 538 aaKnown RBP27.94■■■□□ 2.06
TMEM88B-201ENST00000378821 SIRT1Q96EB6 747 aa27.92■■■□□ 2.06
TMEM88B-201ENST00000378821 TMEM132EQ6IEE7 984 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms