RNA–Protein interactions for RNA: ENST00000378546.8

FAAP20-202, Transcript of FA core complex associated protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAAP20, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-202ENST00000378546 SENP3Q9H4L4 574 aaPredicted RBP38.6■■■■□ 3.77
FAAP20-202ENST00000378546 RIMS2Q9UQ26 1411 aa38.6■■■■□ 3.77
FAAP20-202ENST00000378546 HDGFP51858 240 aaKnown RBP38.58■■■■□ 3.77
FAAP20-202ENST00000378546 ZFYVE9O95405 1425 aa38.57■■■■□ 3.77
FAAP20-202ENST00000378546 ALKQ9UM73 1620 aa38.55■■■■□ 3.76
FAAP20-202ENST00000378546 HSPA1LP34931 641 aa38.54■■■■□ 3.76
FAAP20-202ENST00000378546 SPHKAPQ2M3C7 1700 aa38.53■■■■□ 3.76
FAAP20-202ENST00000378546 PLEKHG1Q9ULL1 1385 aa38.52■■■■□ 3.76
FAAP20-202ENST00000378546 XIRP1Q702N8 1843 aaKnown RBP38.52■■■■□ 3.76
FAAP20-202ENST00000378546 NAIPQ13075 1403 aa38.51■■■■□ 3.76
FAAP20-202ENST00000378546 KCNA6P17658 529 aa38.5■■■■□ 3.75
FAAP20-202ENST00000378546 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.49■■■■□ 3.75
FAAP20-202ENST00000378546 NWD1Q149M9 1564 aa38.45■■■■□ 3.75
FAAP20-202ENST00000378546 NUTM2DQ5VT03 806 aaPredicted RBP38.45■■■■□ 3.75
FAAP20-202ENST00000378546 TMEM94Q12767 1356 aa38.44■■■■□ 3.74
FAAP20-202ENST00000378546 NKTRP30414 1462 aaKnown RBP38.43■■■■□ 3.74
FAAP20-202ENST00000378546 PROSER2Q86WR7 435 aaPredicted RBP38.43■■■■□ 3.74
FAAP20-202ENST00000378546 HFM1A2PYH4 1435 aa38.41■■■■□ 3.74
FAAP20-202ENST00000378546 TRIM52Q96A61 297 aa38.39■■■■□ 3.74
FAAP20-202ENST00000378546 RBM33Q96EV2 1170 aaKnown RBP38.36■■■■□ 3.73
FAAP20-202ENST00000378546 CHD2O14647 1828 aaKnown RBP38.35■■■■□ 3.73
FAAP20-202ENST00000378546 DIP2AQ14689 1571 aa38.35■■■■□ 3.73
FAAP20-202ENST00000378546 ZNF326Q5BKZ1 582 aaKnown RBP38.33■■■■□ 3.73
FAAP20-202ENST00000378546 TRPM2O94759 1503 aa38.32■■■■□ 3.72
FAAP20-202ENST00000378546 CLTCL1P53675 1640 aa38.31■■■■□ 3.72
FAAP20-202ENST00000378546 TBX22Q9Y458 520 aa38.3■■■■□ 3.72
FAAP20-202ENST00000378546 ADAMTS13Q76LX8 1427 aa38.29■■■■□ 3.72
FAAP20-202ENST00000378546 MED1Q15648 1581 aaPredicted RBP38.28■■■■□ 3.72
FAAP20-202ENST00000378546 ILDR2Q71H61 639 aa38.28■■■■□ 3.72
FAAP20-202ENST00000378546 MSH6P52701 1360 aa38.28■■■■□ 3.72
FAAP20-202ENST00000378546 KIF1BO60333 1816 aa38.25■■■■□ 3.71
FAAP20-202ENST00000378546 SLC4A1APQ9BWU0 796 aaKnown RBP38.23■■■■□ 3.71
FAAP20-202ENST00000378546 C14orf37Q86TY3 774 aa38.21■■■■□ 3.71
FAAP20-202ENST00000378546 PIK3R4Q99570 1358 aa38.2■■■■□ 3.71
FAAP20-202ENST00000378546 ROBO1Q9Y6N7 1651 aa38.18■■■■□ 3.7
FAAP20-202ENST00000378546 FAM135BQ49AJ0 1406 aa38.17■■■■□ 3.7
FAAP20-202ENST00000378546 SETBP1Q9Y6X0 1596 aa38.16■■■■□ 3.7
FAAP20-202ENST00000378546 NRXN3Q9Y4C0 1643 aa38.15■■■■□ 3.7
FAAP20-202ENST00000378546 NEXMIFQ5QGS0 1516 aa38.14■■■■□ 3.7
FAAP20-202ENST00000378546 PHF23Q9BUL5 403 aaPredicted RBP38.11■■■■□ 3.69
FAAP20-202ENST00000378546 AMOTL2Q9Y2J4 779 aa38.09■■■■□ 3.69
FAAP20-202ENST00000378546 NCOA3Q9Y6Q9 1424 aa38.09■■■■□ 3.69
FAAP20-202ENST00000378546 PTPRUQ92729 1446 aa38.06■■■■□ 3.68
FAAP20-202ENST00000378546 SLAIN2Q9P270 581 aa38.05■■■■□ 3.68
FAAP20-202ENST00000378546 XRN1Q8IZH2 1706 aaKnown RBP38.04■■■■□ 3.68
FAAP20-202ENST00000378546 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.02■■■■□ 3.68
FAAP20-202ENST00000378546 FOXD1Q16676 465 aa38.01■■■■□ 3.68
FAAP20-202ENST00000378546 SOCS7O14512 581 aa38■■■■□ 3.67
FAAP20-202ENST00000378546 ATF3P18847 181 aa37.99■■■■□ 3.67
FAAP20-202ENST00000378546 METP08581 1390 aa37.98■■■■□ 3.67
FAAP20-202ENST00000378546 PHLPP1O60346 1717 aa37.98■■■■□ 3.67
FAAP20-202ENST00000378546 CADPS2Q86UW7 1296 aa37.97■■■■□ 3.67
FAAP20-202ENST00000378546 C19orf44Q9H6X5 657 aa37.97■■■■□ 3.67
FAAP20-202ENST00000378546 VGFO15240 615 aaPredicted RBP37.96■■■■□ 3.67
FAAP20-202ENST00000378546 CCDC144AA2RUR9 1427 aa37.95■■■■□ 3.67
FAAP20-202ENST00000378546 PPLO60437 1756 aa37.93■■■■□ 3.66
FAAP20-202ENST00000378546 MPHOSPH9Q99550 1183 aa37.93■■■■□ 3.66
FAAP20-202ENST00000378546 RPGRIP1LQ68CZ1 1315 aa37.92■■■■□ 3.66
FAAP20-202ENST00000378546 SETD5Q9C0A6 1442 aa37.88■■■■□ 3.66
FAAP20-202ENST00000378546 DCCP43146 1447 aa37.86■■■■□ 3.65
FAAP20-202ENST00000378546 ACIN1Q9UKV3 1341 aaKnown RBP37.85■■■■□ 3.65
FAAP20-202ENST00000378546 SETD1AO15047 1707 aaKnown RBP37.84■■■■□ 3.65
FAAP20-202ENST00000378546 COL16A1Q07092 1604 aaPredicted RBP37.8■■■■□ 3.64
FAAP20-202ENST00000378546 RGL3Q3MIN7 710 aa37.8■■■■□ 3.64
FAAP20-202ENST00000378546 NALCNQ8IZF0 1738 aa37.79■■■■□ 3.64
FAAP20-202ENST00000378546 ADGRL3Q9HAR2 1447 aa37.78■■■■□ 3.64
FAAP20-202ENST00000378546 JCADQ9P266 1359 aa37.78■■■■□ 3.64
FAAP20-202ENST00000378546 RAB3GAP2Q9H2M9 1393 aa37.76■■■■□ 3.64
FAAP20-202ENST00000378546 AHDC1Q5TGY3 1603 aaPredicted RBP37.76■■■■□ 3.63
FAAP20-202ENST00000378546 PTCH1Q13635 1447 aa37.75■■■■□ 3.63
FAAP20-202ENST00000378546 SPATA31E1Q6ZUB1 1445 aa37.74■■■■□ 3.63
FAAP20-202ENST00000378546 IFT172Q9UG01 1749 aa37.73■■■■□ 3.63
FAAP20-202ENST00000378546 MST1RQ04912 1400 aa37.72■■■■□ 3.63
FAAP20-202ENST00000378546 BRINP3Q76B58 766 aa37.72■■■■□ 3.63
FAAP20-202ENST00000378546 ASXL1Q8IXJ9 1541 aa37.71■■■■□ 3.63
FAAP20-202ENST00000378546 ANKRD30BQ9BXX2 1392 aa37.69■■■■□ 3.62
FAAP20-202ENST00000378546 ROBO2Q9HCK4 1378 aa37.68■■■■□ 3.62
FAAP20-202ENST00000378546 ADGRF5Q8IZF2 1346 aa37.68■■■■□ 3.62
FAAP20-202ENST00000378546 PRAG1Q86YV5 1406 aa37.62■■■■□ 3.61
FAAP20-202ENST00000378546 RGS17Q9UGC6 210 aaPredicted RBP37.62■■■■□ 3.61
FAAP20-202ENST00000378546 SHPRHQ149N8 1683 aa37.62■■■■□ 3.61
FAAP20-202ENST00000378546 NHSL1Q5SYE7 1610 aa37.6■■■■□ 3.61
FAAP20-202ENST00000378546 SPATA31A6Q5VVP1 1343 aa37.59■■■■□ 3.61
FAAP20-202ENST00000378546 MEX3CQ5U5Q3 659 aaKnown RBP37.57■■■■□ 3.6
FAAP20-202ENST00000378546 PIK3C2GO75747 1445 aa37.56■■■■□ 3.6
FAAP20-202ENST00000378546 STK26Q9P289 416 aa37.56■■■■□ 3.6
FAAP20-202ENST00000378546 C1orf167Q5SNV9 1468 aa37.54■■■■□ 3.6
FAAP20-202ENST00000378546 LRP6O75581 1613 aa37.52■■■■□ 3.6
FAAP20-202ENST00000378546 LRPPRCP42704 1394 aaKnown RBP37.49■■■■□ 3.59
FAAP20-202ENST00000378546 KNDC1Q76NI1 1749 aa37.49■■■■□ 3.59
FAAP20-202ENST00000378546 TMEM132EQ6IEE7 984 aa37.48■■■■□ 3.59
FAAP20-202ENST00000378546 DDX17Q92841 729 aaKnown RBP37.48■■■■□ 3.59
FAAP20-202ENST00000378546 CDC42BPGQ6DT37 1551 aa37.47■■■■□ 3.59
FAAP20-202ENST00000378546 MYOM2P54296 1465 aa37.47■■■■□ 3.59
FAAP20-202ENST00000378546 POTEAQ6S8J7 498 aa37.47■■■■□ 3.59
FAAP20-202ENST00000378546 TECPR2O15040 1411 aa37.46■■■■□ 3.59
FAAP20-202ENST00000378546 NUTM2BA6NNL0 878 aaPredicted RBP37.46■■■■□ 3.59
FAAP20-202ENST00000378546 NUTM2EB1AL46 878 aaPredicted RBP37.46■■■■□ 3.59
FAAP20-202ENST00000378546 NUTM2AQ8IVF1 878 aaPredicted RBP37.46■■■■□ 3.59
FAAP20-202ENST00000378546 LAMC1P11047 1609 aa37.46■■■■□ 3.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms