RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 PNNQ9H307 717 aaKnown RBP10.78□□□□□ -0.68
VPS36-201ENST00000378060 CFAP65Q6ZU64 1925 aaKnown RBP10.78□□□□□ -0.68
VPS36-201ENST00000378060 ATP10AO60312 1499 aa10.77□□□□□ -0.68
VPS36-201ENST00000378060 KTN1Q86UP2 1357 aaKnown RBP10.77□□□□□ -0.68
VPS36-201ENST00000378060 PZPP20742 1482 aa10.77□□□□□ -0.69
VPS36-201ENST00000378060 CEP152O94986 1710 aa10.77□□□□□ -0.69
VPS36-201ENST00000378060 MPHOSPH9Q99550 1183 aa10.77□□□□□ -0.69
VPS36-201ENST00000378060 L1TD1Q5T7N2 865 aaKnown RBP10.76□□□□□ -0.69
VPS36-201ENST00000378060 RCAN3Q9UKA8 241 aa10.76□□□□□ -0.69
VPS36-201ENST00000378060 PKD2Q13563 968 aa10.75□□□□□ -0.69
VPS36-201ENST00000378060 UNC13BO14795 1591 aa10.75□□□□□ -0.69
VPS36-201ENST00000378060 FAM135AQ9P2D6 1515 aa10.75□□□□□ -0.69
VPS36-201ENST00000378060 PTMAP06454 111 aaKnown RBP10.75□□□□□ -0.69
VPS36-201ENST00000378060 MAGI2Q86UL8 1455 aa10.75□□□□□ -0.69
VPS36-201ENST00000378060 PDE3BQ13370 1112 aa10.74□□□□□ -0.69
VPS36-201ENST00000378060 DEPDC5O75140 1603 aa10.74□□□□□ -0.69
VPS36-201ENST00000378060 CFAP44Q96MT7 982 aa10.74□□□□□ -0.69
VPS36-201ENST00000378060 EIF2AK4Q9P2K8 1649 aaKnown RBP10.73□□□□□ -0.69
VPS36-201ENST00000378060 TNNT2P45379 298 aaPredicted RBP10.73□□□□□ -0.69
VPS36-201ENST00000378060 ROCK2O75116 1388 aaKnown RBP10.73□□□□□ -0.69
VPS36-201ENST00000378060 HSP90AB1P08238 724 aaKnown RBP10.72□□□□□ -0.69
VPS36-201ENST00000378060 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
VPS36-201ENST00000378060 HSCBQ8IWL3 235 aa10.72□□□□□ -0.69
VPS36-201ENST00000378060 NAP1L5Q96NT1 182 aaPredicted RBP10.72□□□□□ -0.69
VPS36-201ENST00000378060 IPO9Q96P70 1041 aaKnown RBP10.72□□□□□ -0.69
VPS36-201ENST00000378060 RNF17Q9BXT8 1623 aaKnown RBP10.72□□□□□ -0.69
VPS36-201ENST00000378060 PRDM15P57071 1507 aaPredicted RBP10.72□□□□□ -0.69
VPS36-201ENST00000378060 CLTCQ00610 1675 aaKnown RBP10.71□□□□□ -0.69
VPS36-201ENST00000378060 IQGAP3Q86VI3 1631 aa10.71□□□□□ -0.69
VPS36-201ENST00000378060 L3MBTL2Q969R5 705 aa10.71□□□□□ -0.69
VPS36-201ENST00000378060 RTN4Q9NQC3 1192 aaKnown RBP10.71□□□□□ -0.69
VPS36-201ENST00000378060 E9PCH4 1651 aa10.71□□□□□ -0.69
VPS36-201ENST00000378060 KANK1Q14678 1352 aa10.71□□□□□ -0.7
VPS36-201ENST00000378060 HAP1P54257 671 aaPredicted RBP10.7□□□□□ -0.7
VPS36-201ENST00000378060 NLRP13Q86W25 1043 aa10.7□□□□□ -0.7
VPS36-201ENST00000378060 CEBPAP49715 358 aaPredicted RBP10.7□□□□□ -0.7
VPS36-201ENST00000378060 POGKQ9P215 609 aa10.7□□□□□ -0.7
VPS36-201ENST00000378060 UGGT1Q9NYU2 1555 aa10.69□□□□□ -0.7
VPS36-201ENST00000378060 DNTTIP2Q5QJE6 756 aaKnown RBP10.69□□□□□ -0.7
VPS36-201ENST00000378060 ABCC3O15438 1527 aa10.69□□□□□ -0.7
VPS36-201ENST00000378060 FBXO31Q5XUX0 539 aaPredicted RBP10.69□□□□□ -0.7
VPS36-201ENST00000378060 KDM5DQ9BY66 1539 aa10.69□□□□□ -0.7
VPS36-201ENST00000378060 BCORL1Q5H9F3 1711 aa10.68□□□□□ -0.7
VPS36-201ENST00000378060 U2SURPO15042 1029 aaKnown RBP10.68□□□□□ -0.7
VPS36-201ENST00000378060 MORC1Q86VD1 984 aa10.68□□□□□ -0.7
VPS36-201ENST00000378060 REREQ9P2R6 1566 aa10.68□□□□□ -0.7
VPS36-201ENST00000378060 VWDEQ8N2E2 1590 aa10.68□□□□□ -0.7
VPS36-201ENST00000378060 CAMSAP1Q5T5Y3 1602 aa10.68□□□□□ -0.7
VPS36-201ENST00000378060 ZRSR1Q15695 479 aaKnown RBP10.68□□□□□ -0.7
VPS36-201ENST00000378060 SENP3Q9H4L4 574 aaPredicted RBP10.68□□□□□ -0.7
VPS36-201ENST00000378060 IPO8O15397 1037 aaKnown RBP10.67□□□□□ -0.7
VPS36-201ENST00000378060 PTMSP20962 102 aa10.67□□□□□ -0.7
VPS36-201ENST00000378060 USP35Q9P2H5 1018 aa10.67□□□□□ -0.7
VPS36-201ENST00000378060 RWDD1Q9H446 243 aaPredicted RBP10.66□□□□□ -0.7
VPS36-201ENST00000378060 AGLP35573 1532 aa10.66□□□□□ -0.7
VPS36-201ENST00000378060 NPATQ14207 1427 aa10.66□□□□□ -0.7
VPS36-201ENST00000378060 MADDQ8WXG6 1647 aa10.66□□□□□ -0.7
VPS36-201ENST00000378060 TET3O43151 1660 aa10.66□□□□□ -0.7
VPS36-201ENST00000378060 FER1L4A9Z1Z3 1794 aa10.66□□□□□ -0.7
VPS36-201ENST00000378060 EFCAB6Q5THR3 1501 aa10.66□□□□□ -0.7
VPS36-201ENST00000378060 PLA2R1Q13018 1463 aa10.65□□□□□ -0.7
VPS36-201ENST00000378060 ZBED9Q6R2W3 1325 aa10.64□□□□□ -0.71
VPS36-201ENST00000378060 FANCIQ9NVI1 1328 aa10.64□□□□□ -0.71
VPS36-201ENST00000378060 RIMS1Q86UR5 1692 aaKnown RBP10.64□□□□□ -0.71
VPS36-201ENST00000378060 GOLGA2Q08379 1002 aa10.64□□□□□ -0.71
VPS36-201ENST00000378060 PRKRIP1Q9H875 184 aaPredicted RBP10.64□□□□□ -0.71
VPS36-201ENST00000378060 ANKRD30BQ9BXX2 1392 aa10.64□□□□□ -0.71
VPS36-201ENST00000378060 PMFBP1Q8TBY8 1022 aa10.64□□□□□ -0.71
VPS36-201ENST00000378060 GBP4Q96PP9 640 aa10.63□□□□□ -0.71
VPS36-201ENST00000378060 SPHKAPQ2M3C7 1700 aa10.63□□□□□ -0.71
VPS36-201ENST00000378060 CALD1Q05682 793 aaKnown RBP10.62□□□□□ -0.71
VPS36-201ENST00000378060 C14orf37Q86TY3 774 aa10.62□□□□□ -0.71
VPS36-201ENST00000378060 MCCP23508 829 aa10.61□□□□□ -0.71
VPS36-201ENST00000378060 MSNP26038 577 aaKnown RBP10.61□□□□□ -0.71
VPS36-201ENST00000378060 ZC3H13Q5T200 1668 aaKnown RBP10.61□□□□□ -0.71
VPS36-201ENST00000378060 ZMYM3Q14202 1370 aa10.61□□□□□ -0.71
VPS36-201ENST00000378060 CLTCL1P53675 1640 aa10.61□□□□□ -0.71
VPS36-201ENST00000378060 MYBBP1AQ9BQG0 1328 aaKnown RBP10.61□□□□□ -0.71
VPS36-201ENST00000378060 SYNMO15061 1565 aa10.61□□□□□ -0.71
VPS36-201ENST00000378060 C3P01024 1663 aa10.61□□□□□ -0.71
VPS36-201ENST00000378060 PREX1Q8TCU6 1659 aa10.61□□□□□ -0.71
VPS36-201ENST00000378060 LMTK2Q8IWU2 1503 aa10.6□□□□□ -0.71
VPS36-201ENST00000378060 NUTM2DQ5VT03 806 aaPredicted RBP10.6□□□□□ -0.71
VPS36-201ENST00000378060 EIF3AQ14152 1382 aaKnown RBP10.6□□□□□ -0.71
VPS36-201ENST00000378060 NRDCO43847 1150 aa10.6□□□□□ -0.71
VPS36-201ENST00000378060 SRPK2P78362 688 aaKnown RBP10.59□□□□□ -0.71
VPS36-201ENST00000378060 MROH2AA6NES4 1674 aa10.59□□□□□ -0.71
VPS36-201ENST00000378060 ADAMTSL3P82987 1691 aa10.59□□□□□ -0.71
VPS36-201ENST00000378060 GOLGA6L6A8MZA4 724 aa10.58□□□□□ -0.72
VPS36-201ENST00000378060 CCDC144AA2RUR9 1427 aa10.58□□□□□ -0.72
VPS36-201ENST00000378060 U2AF1L5P0DN76 240 aaPredicted RBP10.58□□□□□ -0.72
VPS36-201ENST00000378060 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
VPS36-201ENST00000378060 U2AF1Q01081 240 aaKnown RBP eCLIP10.58□□□□□ -0.72
VPS36-201ENST00000378060 MYO5BQ9ULV0 1848 aa10.58□□□□□ -0.72
VPS36-201ENST00000378060 CHAF1AQ13111 956 aaPredicted RBP10.58□□□□□ -0.72
VPS36-201ENST00000378060 KDM4FA0A1W2PPD8 638 aa10.57□□□□□ -0.72
VPS36-201ENST00000378060 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
VPS36-201ENST00000378060 CENPQQ7L2Z9 268 aaPredicted RBP10.57□□□□□ -0.72
VPS36-201ENST00000378060 SLKQ9H2G2 1235 aaPredicted RBP10.57□□□□□ -0.72
VPS36-201ENST00000378060 TRPM2O94759 1503 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms