RNA–Protein interactions for RNA: ENST00000377833.8

CUBN-202, Transcript of cubilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUBN, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-202ENST00000377833 ZKSCAN1P17029 563 aaPredicted RBP7.38□□□□□ -1.23
CUBN-202ENST00000377833 NBR1Q14596 966 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 ACBD3Q9H3P7 528 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 PDCP20941 246 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 MPHOSPH9Q99550 1183 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 U2SURPO15042 1029 aaKnown RBP7.38□□□□□ -1.23
CUBN-202ENST00000377833 HIP1O00291 1037 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 CEP89Q96ST8 783 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 RALGAPBQ86X10 1494 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 PRXQ9BXM0 1461 aa7.38□□□□□ -1.23
CUBN-202ENST00000377833 DHX57Q6P158 1386 aaKnown RBP7.37□□□□□ -1.23
CUBN-202ENST00000377833 DHX29Q7Z478 1369 aaKnown RBP7.37□□□□□ -1.23
CUBN-202ENST00000377833 ERC2O15083 957 aa7.37□□□□□ -1.23
CUBN-202ENST00000377833 TEX14Q8IWB6 1497 aa7.37□□□□□ -1.23
CUBN-202ENST00000377833 HMGB1P09429 215 aaKnown RBP7.37□□□□□ -1.23
CUBN-202ENST00000377833 FRAT1Q92837 279 aaPredicted RBP7.37□□□□□ -1.23
CUBN-202ENST00000377833 BCL11AQ9H165 835 aa7.37□□□□□ -1.23
CUBN-202ENST00000377833 ITPRIPQ8IWB1 547 aa7.37□□□□□ -1.23
CUBN-202ENST00000377833 NAP1L2Q9ULW6 460 aaPredicted RBP7.37□□□□□ -1.23
CUBN-202ENST00000377833 RPGRIP1LQ68CZ1 1315 aa7.36□□□□□ -1.23
CUBN-202ENST00000377833 CCDC47Q96A33 483 aaKnown RBP7.36□□□□□ -1.23
CUBN-202ENST00000377833 MYO5CQ9NQX4 1742 aa7.36□□□□□ -1.23
CUBN-202ENST00000377833 DDX58O95786 925 aaKnown RBP7.36□□□□□ -1.23
CUBN-202ENST00000377833 MCM2P49736 904 aa7.36□□□□□ -1.23
CUBN-202ENST00000377833 ATAD2Q6PL18 1390 aa7.36□□□□□ -1.23
CUBN-202ENST00000377833 NOL10Q9BSC4 688 aaKnown RBP7.36□□□□□ -1.23
CUBN-202ENST00000377833 COG3Q96JB2 828 aa7.36□□□□□ -1.23
CUBN-202ENST00000377833 RGL3Q3MIN7 710 aa7.36□□□□□ -1.23
CUBN-202ENST00000377833 GORABQ5T7V8 394 aa7.36□□□□□ -1.23
CUBN-202ENST00000377833 LETM1O95202 739 aaPredicted RBP7.35□□□□□ -1.23
CUBN-202ENST00000377833 U2AF1L5P0DN76 240 aaPredicted RBP7.35□□□□□ -1.23
CUBN-202ENST00000377833 U2AF1Q01081 240 aaKnown RBP eCLIP7.35□□□□□ -1.23
CUBN-202ENST00000377833 NAP1L5Q96NT1 182 aaPredicted RBP7.35□□□□□ -1.23
CUBN-202ENST00000377833 DHX16O60231 1041 aaKnown RBP7.35□□□□□ -1.23
CUBN-202ENST00000377833 SHROOM2Q13796 1616 aa7.35□□□□□ -1.23
CUBN-202ENST00000377833 TTC5Q8N0Z6 440 aa7.35□□□□□ -1.23
CUBN-202ENST00000377833 CAGE1Q8TC20 777 aa7.35□□□□□ -1.23
CUBN-202ENST00000377833 API5Q9BZZ5 524 aaKnown RBP7.35□□□□□ -1.23
CUBN-202ENST00000377833 BRMS1Q9HCU9 246 aa7.35□□□□□ -1.23
CUBN-202ENST00000377833 PLEKHH1Q9ULM0 1364 aa7.35□□□□□ -1.23
CUBN-202ENST00000377833 RGS3P49796 1198 aa7.35□□□□□ -1.23
CUBN-202ENST00000377833 GPRASP1Q5JY77 1395 aa7.34□□□□□ -1.23
CUBN-202ENST00000377833 NUP160Q12769 1436 aa7.34□□□□□ -1.23
CUBN-202ENST00000377833 TDRD9Q8NDG6 1382 aaKnown RBP7.34□□□□□ -1.23
CUBN-202ENST00000377833 IPO9Q96P70 1041 aaKnown RBP7.34□□□□□ -1.24
CUBN-202ENST00000377833 TCEAL9Q9UHQ7 104 aa7.34□□□□□ -1.24
CUBN-202ENST00000377833 MAP7D2Q96T17 732 aa7.33□□□□□ -1.24
CUBN-202ENST00000377833 FAM161AQ3B820 660 aa7.33□□□□□ -1.24
CUBN-202ENST00000377833 CALRP27797 417 aaKnown RBP7.33□□□□□ -1.24
CUBN-202ENST00000377833 ZKSCAN2Q63HK3 967 aa7.33□□□□□ -1.24
CUBN-202ENST00000377833 LUC7LQ9NQ29 371 aaKnown RBP7.33□□□□□ -1.24
CUBN-202ENST00000377833 KIF1BO60333 1816 aa7.33□□□□□ -1.24
CUBN-202ENST00000377833 CAMSAP2Q08AD1 1489 aa7.33□□□□□ -1.24
CUBN-202ENST00000377833 GNAI1P63096 354 aa7.33□□□□□ -1.24
CUBN-202ENST00000377833 TEX35Q5T0J7 233 aa7.33□□□□□ -1.24
CUBN-202ENST00000377833 SUPT16HQ9Y5B9 1047 aaKnown RBP7.33□□□□□ -1.24
CUBN-202ENST00000377833 DCTN1Q14203 1278 aa7.33□□□□□ -1.24
CUBN-202ENST00000377833 XBP1P17861 261 aa7.33□□□□□ -1.24
CUBN-202ENST00000377833 ARGLU1Q9NWB6 273 aaPredicted RBP7.33□□□□□ -1.24
CUBN-202ENST00000377833 KIAA1107Q9UPP5 1409 aa7.32□□□□□ -1.24
CUBN-202ENST00000377833 A0A0G2JS52 829 aa7.32□□□□□ -1.24
CUBN-202ENST00000377833 DIAPH3Q9NSV4 1193 aa7.32□□□□□ -1.24
CUBN-202ENST00000377833 ERBINQ96RT1 1412 aa7.32□□□□□ -1.24
CUBN-202ENST00000377833 IQCEQ6IPM2 695 aa7.32□□□□□ -1.24
CUBN-202ENST00000377833 HSPA5P11021 654 aaKnown RBP7.32□□□□□ -1.24
CUBN-202ENST00000377833 SYNE3Q6ZMZ3 975 aa7.32□□□□□ -1.24
CUBN-202ENST00000377833 NKTRP30414 1462 aaKnown RBP7.32□□□□□ -1.24
CUBN-202ENST00000377833 PSMA5P28066 241 aa7.32□□□□□ -1.24
CUBN-202ENST00000377833 DUOX2Q9NRD8 1548 aa7.32□□□□□ -1.24
CUBN-202ENST00000377833 NOM1Q5C9Z4 860 aaKnown RBP7.32□□□□□ -1.24
CUBN-202ENST00000377833 AKAP17AQ02040 695 aaKnown RBP7.32□□□□□ -1.24
CUBN-202ENST00000377833 PLXNC1O60486 1568 aa7.32□□□□□ -1.24
CUBN-202ENST00000377833 C1orf141Q5JVX7 400 aa7.31□□□□□ -1.24
CUBN-202ENST00000377833 CC2D1BQ5T0F9 858 aaKnown RBP7.31□□□□□ -1.24
CUBN-202ENST00000377833 JMYQ8N9B5 988 aa7.31□□□□□ -1.24
CUBN-202ENST00000377833 RASSF8Q8NHQ8 419 aa7.31□□□□□ -1.24
CUBN-202ENST00000377833 ABCC11Q96J66 1382 aa7.31□□□□□ -1.24
CUBN-202ENST00000377833 SART3Q15020 963 aaKnown RBP7.31□□□□□ -1.24
CUBN-202ENST00000377833 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.31□□□□□ -1.24
CUBN-202ENST00000377833 PPP6R1Q9UPN7 881 aa7.31□□□□□ -1.24
CUBN-202ENST00000377833 NUCB2P80303 420 aa7.31□□□□□ -1.24
CUBN-202ENST00000377833 ERC1Q8IUD2 1116 aa7.31□□□□□ -1.24
CUBN-202ENST00000377833 HMGN5P82970 282 aaKnown RBP7.31□□□□□ -1.24
CUBN-202ENST00000377833 SLC52A1Q9NWF4 448 aa7.31□□□□□ -1.24
CUBN-202ENST00000377833 FANCIQ9NVI1 1328 aa7.3□□□□□ -1.24
CUBN-202ENST00000377833 CLSTN1O94985 981 aa7.3□□□□□ -1.24
CUBN-202ENST00000377833 KDM5AP29375 1690 aaKnown RBP7.3□□□□□ -1.24
CUBN-202ENST00000377833 GOLGA6L19H0YKK7 550 aa7.3□□□□□ -1.24
CUBN-202ENST00000377833 MBD3O95983 291 aa7.3□□□□□ -1.24
CUBN-202ENST00000377833 MAST1Q9Y2H9 1570 aa7.3□□□□□ -1.24
CUBN-202ENST00000377833 TRIM29Q14134 588 aa7.3□□□□□ -1.24
CUBN-202ENST00000377833 TRIM21P19474 475 aaKnown RBP7.3□□□□□ -1.24
CUBN-202ENST00000377833 SLC3A2P08195 630 aaKnown RBP7.3□□□□□ -1.24
CUBN-202ENST00000377833 CCDC173Q0VFZ6 552 aa7.3□□□□□ -1.24
CUBN-202ENST00000377833 ADAMTS12P58397 1594 aa7.29□□□□□ -1.24
CUBN-202ENST00000377833 DNAI2Q9GZS0 605 aa7.29□□□□□ -1.24
CUBN-202ENST00000377833 DHX37Q8IY37 1157 aaKnown RBP7.29□□□□□ -1.24
CUBN-202ENST00000377833 OSCARQ8IYS5 282 aa7.29□□□□□ -1.24
CUBN-202ENST00000377833 CWC15Q9P013 229 aaKnown RBP7.29□□□□□ -1.24
CUBN-202ENST00000377833 LMOD2Q6P5Q4 547 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms