RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 BANK1Q8NDB2 785 aa9.76□□□□□ -0.85
SSX3-203ENST00000376895 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
SSX3-203ENST00000376895 NUDT18Q6ZVK8 323 aa9.75□□□□□ -0.85
SSX3-203ENST00000376895 NUTM1Q86Y26 1132 aa9.75□□□□□ -0.85
SSX3-203ENST00000376895 SPIRE2Q8WWL2 714 aa9.75□□□□□ -0.85
SSX3-203ENST00000376895 LIMD1Q9UGP4 676 aa9.75□□□□□ -0.85
SSX3-203ENST00000376895 PNMA3Q9UL41 463 aa9.75□□□□□ -0.85
SSX3-203ENST00000376895 DDX11L8A8MPP1 907 aa9.74□□□□□ -0.85
SSX3-203ENST00000376895 TUSC1Q2TAM9 212 aa9.74□□□□□ -0.85
SSX3-203ENST00000376895 RIC3Q7Z5B4 369 aa9.74□□□□□ -0.85
SSX3-203ENST00000376895 PACS2Q86VP3 889 aa9.74□□□□□ -0.85
SSX3-203ENST00000376895 CCDC82Q8N4S0 544 aa9.74□□□□□ -0.85
SSX3-203ENST00000376895 TMEM134Q9H6X4 195 aa9.74□□□□□ -0.85
SSX3-203ENST00000376895 SNPHO15079 494 aa9.73□□□□□ -0.85
SSX3-203ENST00000376895 TMEM259Q4ZIN3 620 aa9.73□□□□□ -0.85
SSX3-203ENST00000376895 PPP2R2DQ66LE6 453 aa9.73□□□□□ -0.85
SSX3-203ENST00000376895 KCNH8Q96L42 1107 aa9.73□□□□□ -0.85
SSX3-203ENST00000376895 SCRIBQ14160 1630 aa9.73□□□□□ -0.85
SSX3-203ENST00000376895 POTEB2H3BUK9 544 aa9.72□□□□□ -0.85
SSX3-203ENST00000376895 TATDN2Q93075 761 aa9.72□□□□□ -0.85
SSX3-203ENST00000376895 POM121Q96HA1 1249 aa9.72□□□□□ -0.85
SSX3-203ENST00000376895 SPTLC1O15269 473 aa9.71□□□□□ -0.86
SSX3-203ENST00000376895 HOXB1P14653 301 aaPredicted RBP9.71□□□□□ -0.86
SSX3-203ENST00000376895 RSBN1LQ6PCB5 846 aaPredicted RBP9.71□□□□□ -0.86
SSX3-203ENST00000376895 COG6Q9Y2V7 657 aa9.7□□□□□ -0.86
SSX3-203ENST00000376895 GJA5P36382 358 aa9.69□□□□□ -0.86
SSX3-203ENST00000376895 FNBP4Q8N3X1 1017 aaPredicted RBP9.69□□□□□ -0.86
SSX3-203ENST00000376895 RDH13Q8NBN7 331 aa9.69□□□□□ -0.86
SSX3-203ENST00000376895 KCNK17Q96T54 332 aa9.69□□□□□ -0.86
SSX3-203ENST00000376895 C3orf80F5H4A9 247 aa9.68□□□□□ -0.86
SSX3-203ENST00000376895 MOXD2PA6NHM9 499 aa9.67□□□□□ -0.86
SSX3-203ENST00000376895 SOCS7O14512 581 aa9.67□□□□□ -0.86
SSX3-203ENST00000376895 CSPP1Q1MSJ5 1256 aa9.67□□□□□ -0.86
SSX3-203ENST00000376895 CCDC97Q96F63 343 aaPredicted RBP9.67□□□□□ -0.86
SSX3-203ENST00000376895 SNRKQ9NRH2 765 aa9.67□□□□□ -0.86
SSX3-203ENST00000376895 PROX2Q3B8N5 592 aa9.66□□□□□ -0.86
SSX3-203ENST00000376895 FBXO31Q5XUX0 539 aaPredicted RBP9.66□□□□□ -0.86
SSX3-203ENST00000376895 ZNF777Q9ULD5 760 aaPredicted RBP9.66□□□□□ -0.86
SSX3-203ENST00000376895 SMAPO00193 183 aa9.65□□□□□ -0.86
SSX3-203ENST00000376895 WWC1Q8IX03 1113 aa9.65□□□□□ -0.86
SSX3-203ENST00000376895 PRM3Q9NNZ6 103 aa9.65□□□□□ -0.86
SSX3-203ENST00000376895 KDM4AO75164 1064 aa9.64□□□□□ -0.87
SSX3-203ENST00000376895 USP46P62068 366 aa9.64□□□□□ -0.87
SSX3-203ENST00000376895 RSPH4AQ5TD94 716 aa9.64□□□□□ -0.87
SSX3-203ENST00000376895 MTMR14Q8NCE2 650 aa9.64□□□□□ -0.87
SSX3-203ENST00000376895 SERPINA10Q9UK55 444 aa9.64□□□□□ -0.87
SSX3-203ENST00000376895 LILRB3O75022 631 aa9.63□□□□□ -0.87
SSX3-203ENST00000376895 NDUFV2P19404 249 aa9.63□□□□□ -0.87
SSX3-203ENST00000376895 PRPF38BQ5VTL8 546 aaKnown RBP9.63□□□□□ -0.87
SSX3-203ENST00000376895 PODXL2Q9NZ53 605 aa9.63□□□□□ -0.87
SSX3-203ENST00000376895 NUTM2BA6NNL0 878 aaPredicted RBP9.62□□□□□ -0.87
SSX3-203ENST00000376895 NUTM2EB1AL46 878 aaPredicted RBP9.62□□□□□ -0.87
SSX3-203ENST00000376895 QPCTQ16769 361 aa9.62□□□□□ -0.87
SSX3-203ENST00000376895 NUTM2DQ5VT03 806 aaPredicted RBP9.62□□□□□ -0.87
SSX3-203ENST00000376895 NUTM2AQ8IVF1 878 aaPredicted RBP9.62□□□□□ -0.87
SSX3-203ENST00000376895 ZNF330Q9Y3S2 320 aaPredicted RBP9.62□□□□□ -0.87
SSX3-203ENST00000376895 AP1G2O75843 785 aa9.61□□□□□ -0.87
SSX3-203ENST00000376895 ZBED2Q9BTP6 218 aa9.61□□□□□ -0.87
SSX3-203ENST00000376895 ZBTB3Q9H5J0 574 aa9.61□□□□□ -0.87
SSX3-203ENST00000376895 HOXA2O43364 376 aa9.6□□□□□ -0.87
SSX3-203ENST00000376895 USP17L8P0C7I0 530 aa9.6□□□□□ -0.87
SSX3-203ENST00000376895 GCGRP47871 477 aa9.6□□□□□ -0.87
SSX3-203ENST00000376895 SLC4A3P48751 1232 aa9.6□□□□□ -0.87
SSX3-203ENST00000376895 GDPD2Q9HCC8 539 aa9.6□□□□□ -0.87
SSX3-203ENST00000376895 PLSCR2Q9NRY7 297 aa9.6□□□□□ -0.87
SSX3-203ENST00000376895 KIAA1468Q9P260 1216 aa9.6□□□□□ -0.87
SSX3-203ENST00000376895 PCDHB15Q9Y5E8 787 aa9.6□□□□□ -0.87
SSX3-203ENST00000376895 FDX1P10109 184 aa9.59□□□□□ -0.87
SSX3-203ENST00000376895 RABGEF1Q9UJ41 708 aa9.59□□□□□ -0.87
SSX3-203ENST00000376895 RTL5Q5HYW3 569 aaPredicted RBP9.58□□□□□ -0.88
SSX3-203ENST00000376895 SWT1Q5T5J6 900 aaKnown RBP9.58□□□□□ -0.88
SSX3-203ENST00000376895 CABLES1Q8TDN4 633 aa9.58□□□□□ -0.88
SSX3-203ENST00000376895 UNC13AQ9UPW8 1703 aa9.58□□□□□ -0.88
SSX3-203ENST00000376895 PDIA4P13667 645 aaKnown RBP9.57□□□□□ -0.88
SSX3-203ENST00000376895 ABL2P42684 1182 aa9.57□□□□□ -0.88
SSX3-203ENST00000376895 BICRAQ9NZM4 1560 aa9.57□□□□□ -0.88
SSX3-203ENST00000376895 HRCP23327 699 aa9.56□□□□□ -0.88
SSX3-203ENST00000376895 HDGFP51858 240 aaKnown RBP9.56□□□□□ -0.88
SSX3-203ENST00000376895 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
SSX3-203ENST00000376895 PSEN2P49810 448 aa9.55□□□□□ -0.88
SSX3-203ENST00000376895 SLC4A5Q9BY07 1137 aa9.55□□□□□ -0.88
SSX3-203ENST00000376895 SEPT9Q9UHD8 586 aaPredicted RBP9.55□□□□□ -0.88
SSX3-203ENST00000376895 ARHGAP33O14559 1287 aa9.54□□□□□ -0.88
SSX3-203ENST00000376895 SLC10A3P09131 477 aa9.54□□□□□ -0.88
SSX3-203ENST00000376895 TRIM26Q12899 539 aaPredicted RBP9.54□□□□□ -0.88
SSX3-203ENST00000376895 HELBQ8NG08 1087 aaPredicted RBP9.54□□□□□ -0.88
SSX3-203ENST00000376895 NDUFB9Q9Y6M9 179 aa9.54□□□□□ -0.88
SSX3-203ENST00000376895 MTMR2Q13614 643 aa9.53□□□□□ -0.88
SSX3-203ENST00000376895 FAM98CQ17RN3 349 aaKnown RBP9.53□□□□□ -0.88
SSX3-203ENST00000376895 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
SSX3-203ENST00000376895 SLF2Q8IX21 1173 aa9.53□□□□□ -0.88
SSX3-203ENST00000376895 ERBB3P21860 1342 aa9.53□□□□□ -0.88
SSX3-203ENST00000376895 GUCA2AQ02747 115 aa9.52□□□□□ -0.89
SSX3-203ENST00000376895 CALR3Q96L12 384 aaKnown RBP9.52□□□□□ -0.89
SSX3-203ENST00000376895 PBX2P40425 430 aa9.51□□□□□ -0.89
SSX3-203ENST00000376895 VARS2Q5ST30 1063 aaKnown RBP9.51□□□□□ -0.89
SSX3-203ENST00000376895 PCDHGC3Q9UN70 934 aa9.51□□□□□ -0.89
SSX3-203ENST00000376895 CFHP08603 1231 aa9.5□□□□□ -0.89
SSX3-203ENST00000376895 GLMNQ92990 594 aa9.5□□□□□ -0.89
SSX3-203ENST00000376895 HLA-CQ95604 372 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms