RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 SLC26A8Q96RN1 970 aa22.5■■□□□ 1.19
HDAC6-204ENST00000376643 TMEM94Q12767 1356 aa22.5■■□□□ 1.19
HDAC6-204ENST00000376643 IQGAP3Q86VI3 1631 aa22.49■■□□□ 1.19
HDAC6-204ENST00000376643 PHF23Q9BUL5 403 aaPredicted RBP22.49■■□□□ 1.19
HDAC6-204ENST00000376643 ZFYVE9O95405 1425 aa22.48■■□□□ 1.19
HDAC6-204ENST00000376643 RIMS2Q9UQ26 1411 aa22.48■■□□□ 1.19
HDAC6-204ENST00000376643 PROSER2Q86WR7 435 aaPredicted RBP22.48■■□□□ 1.19
HDAC6-204ENST00000376643 NUP155O75694 1391 aa22.48■■□□□ 1.19
HDAC6-204ENST00000376643 NWD1Q149M9 1564 aa22.47■■□□□ 1.19
HDAC6-204ENST00000376643 FAM135BQ49AJ0 1406 aa22.47■■□□□ 1.19
HDAC6-204ENST00000376643 TMEM131LA2VDJ0 1609 aa22.46■■□□□ 1.19
HDAC6-204ENST00000376643 CHGAP10645 457 aaKnown RBP22.45■■□□□ 1.18
HDAC6-204ENST00000376643 ITGAEP38570 1179 aa22.45■■□□□ 1.18
HDAC6-204ENST00000376643 MSH6P52701 1360 aa22.44■■□□□ 1.18
HDAC6-204ENST00000376643 E9PCH4 1651 aa22.43■■□□□ 1.18
HDAC6-204ENST00000376643 TBX22Q9Y458 520 aa22.43■■□□□ 1.18
HDAC6-204ENST00000376643 XIRP1Q702N8 1843 aaKnown RBP22.42■■□□□ 1.18
HDAC6-204ENST00000376643 DIP2AQ14689 1571 aa22.42■■□□□ 1.18
HDAC6-204ENST00000376643 NCOA3Q9Y6Q9 1424 aa22.41■■□□□ 1.18
HDAC6-204ENST00000376643 PIK3R4Q99570 1358 aa22.4■■□□□ 1.18
HDAC6-204ENST00000376643 SENP3Q9H4L4 574 aaPredicted RBP22.37■■□□□ 1.17
HDAC6-204ENST00000376643 MYO5BQ9ULV0 1848 aa22.36■■□□□ 1.17
HDAC6-204ENST00000376643 RRBP1Q9P2E9 1410 aaKnown RBP22.36■■□□□ 1.17
HDAC6-204ENST00000376643 CHD2O14647 1828 aaKnown RBP22.34■■□□□ 1.17
HDAC6-204ENST00000376643 TRPM2O94759 1503 aa22.32■■□□□ 1.16
HDAC6-204ENST00000376643 C14orf37Q86TY3 774 aa22.32■■□□□ 1.16
HDAC6-204ENST00000376643 PPARGC1BQ86YN6 1023 aaKnown RBP22.32■■□□□ 1.16
HDAC6-204ENST00000376643 ADAMTS13Q76LX8 1427 aa22.31■■□□□ 1.16
HDAC6-204ENST00000376643 ROBO1Q9Y6N7 1651 aa22.31■■□□□ 1.16
HDAC6-204ENST00000376643 SLAIN2Q9P270 581 aa22.31■■□□□ 1.16
HDAC6-204ENST00000376643 SPHKAPQ2M3C7 1700 aa22.29■■□□□ 1.16
HDAC6-204ENST00000376643 CADPS2Q86UW7 1296 aa22.29■■□□□ 1.16
HDAC6-204ENST00000376643 RBM33Q96EV2 1170 aaKnown RBP22.29■■□□□ 1.16
HDAC6-204ENST00000376643 ZNF326Q5BKZ1 582 aaKnown RBP22.27■■□□□ 1.16
HDAC6-204ENST00000376643 ATF3P18847 181 aa22.26■■□□□ 1.15
HDAC6-204ENST00000376643 NUTM2DQ5VT03 806 aaPredicted RBP22.26■■□□□ 1.15
HDAC6-204ENST00000376643 C19orf44Q9H6X5 657 aa22.26■■□□□ 1.15
HDAC6-204ENST00000376643 NAIPQ13075 1403 aa22.24■■□□□ 1.15
HDAC6-204ENST00000376643 SETBP1Q9Y6X0 1596 aa22.24■■□□□ 1.15
HDAC6-204ENST00000376643 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
HDAC6-204ENST00000376643 JCADQ9P266 1359 aa22.23■■□□□ 1.15
HDAC6-204ENST00000376643 HFM1A2PYH4 1435 aa22.23■■□□□ 1.15
HDAC6-204ENST00000376643 DCCP43146 1447 aa22.22■■□□□ 1.15
HDAC6-204ENST00000376643 PHLPP1O60346 1717 aa22.19■■□□□ 1.14
HDAC6-204ENST00000376643 TRIM52Q96A61 297 aa22.18■■□□□ 1.14
HDAC6-204ENST00000376643 CLTCL1P53675 1640 aa22.16■■□□□ 1.14
HDAC6-204ENST00000376643 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.15■■□□□ 1.14
HDAC6-204ENST00000376643 SPATA31A6Q5VVP1 1343 aa22.15■■□□□ 1.14
HDAC6-204ENST00000376643 VGFO15240 615 aaPredicted RBP22.15■■□□□ 1.14
HDAC6-204ENST00000376643 KIF1BO60333 1816 aa22.15■■□□□ 1.14
HDAC6-204ENST00000376643 PTPRUQ92729 1446 aa22.14■■□□□ 1.14
HDAC6-204ENST00000376643 RPGRIP1LQ68CZ1 1315 aa22.14■■□□□ 1.14
HDAC6-204ENST00000376643 ACIN1Q9UKV3 1341 aaKnown RBP22.14■■□□□ 1.14
HDAC6-204ENST00000376643 SLC4A1APQ9BWU0 796 aaKnown RBP22.14■■□□□ 1.13
HDAC6-204ENST00000376643 NEXMIFQ5QGS0 1516 aa22.14■■□□□ 1.13
HDAC6-204ENST00000376643 XRN1Q8IZH2 1706 aaKnown RBP22.14■■□□□ 1.13
HDAC6-204ENST00000376643 NRXN3Q9Y4C0 1643 aa22.13■■□□□ 1.13
HDAC6-204ENST00000376643 AHDC1Q5TGY3 1603 aaPredicted RBP22.13■■□□□ 1.13
HDAC6-204ENST00000376643 COL16A1Q07092 1604 aaPredicted RBP22.11■■□□□ 1.13
HDAC6-204ENST00000376643 RGS17Q9UGC6 210 aaPredicted RBP22.11■■□□□ 1.13
HDAC6-204ENST00000376643 METP08581 1390 aa22.1■■□□□ 1.13
HDAC6-204ENST00000376643 ADGRL3Q9HAR2 1447 aa22.07■■□□□ 1.12
HDAC6-204ENST00000376643 BRINP3Q76B58 766 aa22.07■■□□□ 1.12
HDAC6-204ENST00000376643 MEX3CQ5U5Q3 659 aaKnown RBP22.06■■□□□ 1.12
HDAC6-204ENST00000376643 PTCH1Q13635 1447 aa22.06■■□□□ 1.12
HDAC6-204ENST00000376643 MST1RQ04912 1400 aa22.04■■□□□ 1.12
HDAC6-204ENST00000376643 ASXL1Q8IXJ9 1541 aa22.03■■□□□ 1.12
HDAC6-204ENST00000376643 ZNF772Q68DY9 489 aaPredicted RBP22.03■■□□□ 1.12
HDAC6-204ENST00000376643 SHPRHQ149N8 1683 aa22.03■■□□□ 1.12
HDAC6-204ENST00000376643 POTEAQ6S8J7 498 aa22.02■■□□□ 1.12
HDAC6-204ENST00000376643 CCDC144AA2RUR9 1427 aa22.02■■□□□ 1.12
HDAC6-204ENST00000376643 PRAG1Q86YV5 1406 aa22.02■■□□□ 1.12
HDAC6-204ENST00000376643 SETD5Q9C0A6 1442 aa22■■□□□ 1.11
HDAC6-204ENST00000376643 LRRC59Q96AG4 307 aaKnown RBP22■■□□□ 1.11
HDAC6-204ENST00000376643 ANKRD30BQ9BXX2 1392 aa21.97■■□□□ 1.11
HDAC6-204ENST00000376643 NHSL1Q5SYE7 1610 aa21.95■■□□□ 1.1
HDAC6-204ENST00000376643 LRP6O75581 1613 aa21.95■■□□□ 1.1
HDAC6-204ENST00000376643 NALCNQ8IZF0 1738 aa21.94■■□□□ 1.1
HDAC6-204ENST00000376643 PPLO60437 1756 aa21.94■■□□□ 1.1
HDAC6-204ENST00000376643 MPHOSPH9Q99550 1183 aa21.94■■□□□ 1.1
HDAC6-204ENST00000376643 SETD1AO15047 1707 aaKnown RBP21.93■■□□□ 1.1
HDAC6-204ENST00000376643 C1orf167Q5SNV9 1468 aa21.92■■□□□ 1.1
HDAC6-204ENST00000376643 ROBO2Q9HCK4 1378 aa21.92■■□□□ 1.1
HDAC6-204ENST00000376643 NUTM2BA6NNL0 878 aaPredicted RBP21.9■■□□□ 1.1
HDAC6-204ENST00000376643 NUTM2EB1AL46 878 aaPredicted RBP21.9■■□□□ 1.1
HDAC6-204ENST00000376643 NUTM2AQ8IVF1 878 aaPredicted RBP21.9■■□□□ 1.1
HDAC6-204ENST00000376643 FOXD1Q16676 465 aa21.88■■□□□ 1.09
HDAC6-204ENST00000376643 SPATA31E1Q6ZUB1 1445 aa21.88■■□□□ 1.09
HDAC6-204ENST00000376643 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
HDAC6-204ENST00000376643 RXRBP28702 533 aa21.86■■□□□ 1.09
HDAC6-204ENST00000376643 RGL3Q3MIN7 710 aa21.86■■□□□ 1.09
HDAC6-204ENST00000376643 LAMC1P11047 1609 aa21.86■■□□□ 1.09
HDAC6-204ENST00000376643 TECPR2O15040 1411 aa21.85■■□□□ 1.09
HDAC6-204ENST00000376643 CDC42BPGQ6DT37 1551 aa21.85■■□□□ 1.09
HDAC6-204ENST00000376643 LRPPRCP42704 1394 aaKnown RBP21.84■■□□□ 1.09
HDAC6-204ENST00000376643 CDK12Q9NYV4 1490 aaPredicted RBP21.83■■□□□ 1.09
HDAC6-204ENST00000376643 SOS2Q07890 1332 aaPredicted RBP21.83■■□□□ 1.09
HDAC6-204ENST00000376643 ADGRF5Q8IZF2 1346 aa21.83■■□□□ 1.09
HDAC6-204ENST00000376643 AFF2P51816 1311 aa21.82■■□□□ 1.08
HDAC6-204ENST00000376643 NPHP3Q7Z494 1330 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms