RNA–Protein interactions for RNA: ENST00000376486.3

MTHFR-201, Transcript of methylenetetrahydrofolate reductase, humanhuman

TSL 1 (best)

Gene MTHFR, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFR-201ENST00000376486 PHF23Q9BUL5 403 aaPredicted RBP29.62■■■□□ 2.33
MTHFR-201ENST00000376486 NWD1Q149M9 1564 aa29.6■■■□□ 2.33
MTHFR-201ENST00000376486 E9PCH4 1651 aa29.6■■■□□ 2.33
MTHFR-201ENST00000376486 PPP1R15AO75807 674 aaPredicted RBP29.6■■■□□ 2.33
MTHFR-201ENST00000376486 ITGAEP38570 1179 aa29.6■■■□□ 2.33
MTHFR-201ENST00000376486 NKTRP30414 1462 aaKnown RBP29.6■■■□□ 2.33
MTHFR-201ENST00000376486 TMEM131LA2VDJ0 1609 aa29.6■■■□□ 2.33
MTHFR-201ENST00000376486 IQGAP3Q86VI3 1631 aa29.6■■■□□ 2.33
MTHFR-201ENST00000376486 ZFYVE9O95405 1425 aa29.59■■■□□ 2.33
MTHFR-201ENST00000376486 RIMS2Q9UQ26 1411 aa29.59■■■□□ 2.33
MTHFR-201ENST00000376486 PROSER2Q86WR7 435 aaPredicted RBP29.58■■■□□ 2.33
MTHFR-201ENST00000376486 PLEKHG1Q9ULL1 1385 aa29.56■■■□□ 2.32
MTHFR-201ENST00000376486 CHGAP10645 457 aaKnown RBP29.56■■■□□ 2.32
MTHFR-201ENST00000376486 HDGFP51858 240 aaKnown RBP29.56■■■□□ 2.32
MTHFR-201ENST00000376486 PPARGC1BQ86YN6 1023 aaKnown RBP29.55■■■□□ 2.32
MTHFR-201ENST00000376486 RBM33Q96EV2 1170 aaKnown RBP29.54■■■□□ 2.32
MTHFR-201ENST00000376486 NUP155O75694 1391 aa29.52■■■□□ 2.32
MTHFR-201ENST00000376486 FAM135BQ49AJ0 1406 aa29.52■■■□□ 2.32
MTHFR-201ENST00000376486 ROBO1Q9Y6N7 1651 aa29.49■■■□□ 2.31
MTHFR-201ENST00000376486 MSH6P52701 1360 aa29.49■■■□□ 2.31
MTHFR-201ENST00000376486 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.48■■■□□ 2.31
MTHFR-201ENST00000376486 CHD2O14647 1828 aaKnown RBP29.46■■■□□ 2.31
MTHFR-201ENST00000376486 NUTM2DQ5VT03 806 aaPredicted RBP29.44■■■□□ 2.3
MTHFR-201ENST00000376486 DIP2AQ14689 1571 aa29.43■■■□□ 2.3
MTHFR-201ENST00000376486 TBX22Q9Y458 520 aa29.41■■■□□ 2.3
MTHFR-201ENST00000376486 ADAMTS13Q76LX8 1427 aa29.38■■■□□ 2.29
MTHFR-201ENST00000376486 SPHKAPQ2M3C7 1700 aa29.38■■■□□ 2.29
MTHFR-201ENST00000376486 C14orf37Q86TY3 774 aa29.37■■■□□ 2.29
MTHFR-201ENST00000376486 TRPM2O94759 1503 aa29.35■■■□□ 2.29
MTHFR-201ENST00000376486 SLAIN2Q9P270 581 aa29.34■■■□□ 2.29
MTHFR-201ENST00000376486 PIK3R4Q99570 1358 aa29.33■■■□□ 2.29
MTHFR-201ENST00000376486 PHLPP1O60346 1717 aa29.32■■■□□ 2.28
MTHFR-201ENST00000376486 NCOA3Q9Y6Q9 1424 aa29.31■■■□□ 2.28
MTHFR-201ENST00000376486 RRBP1Q9P2E9 1410 aaKnown RBP29.3■■■□□ 2.28
MTHFR-201ENST00000376486 ZNF326Q5BKZ1 582 aaKnown RBP29.28■■■□□ 2.28
MTHFR-201ENST00000376486 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.25■■■□□ 2.27
MTHFR-201ENST00000376486 RGS17Q9UGC6 210 aaPredicted RBP29.25■■■□□ 2.27
MTHFR-201ENST00000376486 SETBP1Q9Y6X0 1596 aa29.24■■■□□ 2.27
MTHFR-201ENST00000376486 CLTCL1P53675 1640 aa29.23■■■□□ 2.27
MTHFR-201ENST00000376486 NRXN3Q9Y4C0 1643 aa29.23■■■□□ 2.27
MTHFR-201ENST00000376486 NAIPQ13075 1403 aa29.23■■■□□ 2.27
MTHFR-201ENST00000376486 ATF3P18847 181 aa29.23■■■□□ 2.27
MTHFR-201ENST00000376486 CADPS2Q86UW7 1296 aa29.23■■■□□ 2.27
MTHFR-201ENST00000376486 AMOTL2Q9Y2J4 779 aa29.23■■■□□ 2.27
MTHFR-201ENST00000376486 PTPRUQ92729 1446 aa29.22■■■□□ 2.27
MTHFR-201ENST00000376486 C19orf44Q9H6X5 657 aa29.21■■■□□ 2.27
MTHFR-201ENST00000376486 JCADQ9P266 1359 aa29.21■■■□□ 2.27
MTHFR-201ENST00000376486 COL16A1Q07092 1604 aaPredicted RBP29.2■■■□□ 2.27
MTHFR-201ENST00000376486 XRN1Q8IZH2 1706 aaKnown RBP29.2■■■□□ 2.26
MTHFR-201ENST00000376486 NEXMIFQ5QGS0 1516 aa29.16■■■□□ 2.26
MTHFR-201ENST00000376486 KIF1BO60333 1816 aa29.16■■■□□ 2.26
MTHFR-201ENST00000376486 AHDC1Q5TGY3 1603 aaPredicted RBP29.13■■■□□ 2.25
MTHFR-201ENST00000376486 TRIM52Q96A61 297 aa29.13■■■□□ 2.25
MTHFR-201ENST00000376486 HFM1A2PYH4 1435 aa29.12■■■□□ 2.25
MTHFR-201ENST00000376486 DCCP43146 1447 aa29.12■■■□□ 2.25
MTHFR-201ENST00000376486 METP08581 1390 aa29.12■■■□□ 2.25
MTHFR-201ENST00000376486 POTEAQ6S8J7 498 aa29.11■■■□□ 2.25
MTHFR-201ENST00000376486 SPATA31A6Q5VVP1 1343 aa29.06■■■□□ 2.24
MTHFR-201ENST00000376486 BRINP3Q76B58 766 aa29.06■■■□□ 2.24
MTHFR-201ENST00000376486 SHPRHQ149N8 1683 aa29.05■■■□□ 2.24
MTHFR-201ENST00000376486 ASXL1Q8IXJ9 1541 aa29.04■■■□□ 2.24
MTHFR-201ENST00000376486 MEX3CQ5U5Q3 659 aaKnown RBP29.04■■■□□ 2.24
MTHFR-201ENST00000376486 SLC4A1APQ9BWU0 796 aaKnown RBP29.04■■■□□ 2.24
MTHFR-201ENST00000376486 LRP6O75581 1613 aa29.04■■■□□ 2.24
MTHFR-201ENST00000376486 MST1RQ04912 1400 aa29.03■■■□□ 2.24
MTHFR-201ENST00000376486 ADGRL3Q9HAR2 1447 aa29.03■■■□□ 2.24
MTHFR-201ENST00000376486 NALCNQ8IZF0 1738 aa29.02■■■□□ 2.24
MTHFR-201ENST00000376486 VGFO15240 615 aaPredicted RBP28.99■■■□□ 2.23
MTHFR-201ENST00000376486 NHSL1Q5SYE7 1610 aa28.97■■■□□ 2.23
MTHFR-201ENST00000376486 SETD1AO15047 1707 aaKnown RBP28.96■■■□□ 2.23
MTHFR-201ENST00000376486 RPGRIP1LQ68CZ1 1315 aa28.94■■■□□ 2.22
MTHFR-201ENST00000376486 PTCH1Q13635 1447 aa28.94■■■□□ 2.22
MTHFR-201ENST00000376486 PPLO60437 1756 aa28.94■■■□□ 2.22
MTHFR-201ENST00000376486 NUTM2BA6NNL0 878 aaPredicted RBP28.92■■■□□ 2.22
MTHFR-201ENST00000376486 NUTM2EB1AL46 878 aaPredicted RBP28.92■■■□□ 2.22
MTHFR-201ENST00000376486 NUTM2AQ8IVF1 878 aaPredicted RBP28.92■■■□□ 2.22
MTHFR-201ENST00000376486 ZNF772Q68DY9 489 aaPredicted RBP28.91■■■□□ 2.22
MTHFR-201ENST00000376486 SETD5Q9C0A6 1442 aa28.91■■■□□ 2.22
MTHFR-201ENST00000376486 FOXD1Q16676 465 aa28.9■■■□□ 2.22
MTHFR-201ENST00000376486 ROBO2Q9HCK4 1378 aa28.88■■■□□ 2.21
MTHFR-201ENST00000376486 CCDC144AA2RUR9 1427 aa28.86■■■□□ 2.21
MTHFR-201ENST00000376486 LRRC59Q96AG4 307 aaKnown RBP28.86■■■□□ 2.21
MTHFR-201ENST00000376486 C1orf167Q5SNV9 1468 aa28.85■■■□□ 2.21
MTHFR-201ENST00000376486 DDX17Q92841 729 aaKnown RBP28.85■■■□□ 2.21
MTHFR-201ENST00000376486 PRAG1Q86YV5 1406 aa28.85■■■□□ 2.21
MTHFR-201ENST00000376486 PNPLA6Q8IY17 1366 aa28.8■■■□□ 2.2
MTHFR-201ENST00000376486 RGL3Q3MIN7 710 aa28.78■■■□□ 2.2
MTHFR-201ENST00000376486 MPHOSPH9Q99550 1183 aa28.78■■■□□ 2.2
MTHFR-201ENST00000376486 AFF2P51816 1311 aa28.77■■■□□ 2.2
MTHFR-201ENST00000376486 LAMC1P11047 1609 aa28.76■■■□□ 2.2
MTHFR-201ENST00000376486 IFT172Q9UG01 1749 aa28.76■■■□□ 2.19
MTHFR-201ENST00000376486 SPATA31E1Q6ZUB1 1445 aa28.76■■■□□ 2.19
MTHFR-201ENST00000376486 ADGRF5Q8IZF2 1346 aa28.75■■■□□ 2.19
MTHFR-201ENST00000376486 RXRBP28702 533 aa28.75■■■□□ 2.19
MTHFR-201ENST00000376486 ORAI2Q96SN7 254 aa28.75■■■□□ 2.19
MTHFR-201ENST00000376486 ANKRD30BQ9BXX2 1392 aa28.75■■■□□ 2.19
MTHFR-201ENST00000376486 C8orf37Q96NL8 207 aa28.74■■■□□ 2.19
MTHFR-201ENST00000376486 CDC42BPGQ6DT37 1551 aa28.74■■■□□ 2.19
MTHFR-201ENST00000376486 STK26Q9P289 416 aa28.7■■■□□ 2.18
MTHFR-201ENST00000376486 SOS2Q07890 1332 aaPredicted RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms