RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 UGGT1Q9NYU2 1555 aa14.21□□□□□ -0.14
CXCL12-203ENST00000374429 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
CXCL12-203ENST00000374429 ABCC2Q92887 1545 aa14.2□□□□□ -0.14
CXCL12-203ENST00000374429 DEKP35659 375 aaKnown RBP14.2□□□□□ -0.14
CXCL12-203ENST00000374429 ADGRL2O95490 1459 aa14.19□□□□□ -0.14
CXCL12-203ENST00000374429 TCERG1O14776 1098 aaKnown RBP14.19□□□□□ -0.14
CXCL12-203ENST00000374429 RRP1P56182 461 aaKnown RBP14.19□□□□□ -0.14
CXCL12-203ENST00000374429 WAPLQ7Z5K2 1190 aa14.19□□□□□ -0.14
CXCL12-203ENST00000374429 BCORL1Q5H9F3 1711 aa14.19□□□□□ -0.14
CXCL12-203ENST00000374429 ZBTB7CA1YPR0 619 aa14.18□□□□□ -0.14
CXCL12-203ENST00000374429 CENPJQ9HC77 1338 aaPredicted RBP14.18□□□□□ -0.14
CXCL12-203ENST00000374429 BCAR3O75815 825 aa14.18□□□□□ -0.14
CXCL12-203ENST00000374429 CARD14Q9BXL6 1004 aa14.18□□□□□ -0.14
CXCL12-203ENST00000374429 MTHFSP49914 203 aa14.17□□□□□ -0.14
CXCL12-203ENST00000374429 RBM33Q96EV2 1170 aaKnown RBP14.17□□□□□ -0.14
CXCL12-203ENST00000374429 ELL2O00472 640 aaPredicted RBP14.16□□□□□ -0.14
CXCL12-203ENST00000374429 MSH5O43196 834 aa14.16□□□□□ -0.14
CXCL12-203ENST00000374429 PRAM1Q96QH2 718 aa14.16□□□□□ -0.14
CXCL12-203ENST00000374429 CEBPAP49715 358 aaPredicted RBP14.15□□□□□ -0.14
CXCL12-203ENST00000374429 SPINK5Q9NQ38 1064 aaPredicted RBP14.15□□□□□ -0.14
CXCL12-203ENST00000374429 RTN4Q9NQC3 1192 aaKnown RBP14.15□□□□□ -0.14
CXCL12-203ENST00000374429 SLC4A3P48751 1232 aa14.15□□□□□ -0.14
CXCL12-203ENST00000374429 DMRT2Q9Y5R5 561 aa14.15□□□□□ -0.14
CXCL12-203ENST00000374429 NOS1P29475 1434 aa14.15□□□□□ -0.14
CXCL12-203ENST00000374429 RALGAPBQ86X10 1494 aa14.14□□□□□ -0.15
CXCL12-203ENST00000374429 CDC42BPBQ9Y5S2 1711 aa14.14□□□□□ -0.15
CXCL12-203ENST00000374429 GOLGA2Q08379 1002 aa14.14□□□□□ -0.15
CXCL12-203ENST00000374429 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
CXCL12-203ENST00000374429 NCKAP5LQ9HCH0 1330 aa14.13□□□□□ -0.15
CXCL12-203ENST00000374429 WDR7Q9Y4E6 1490 aa14.13□□□□□ -0.15
CXCL12-203ENST00000374429 BRD4O60885 1362 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-203ENST00000374429 AMER1Q5JTC6 1135 aaPredicted RBP14.12□□□□□ -0.15
CXCL12-203ENST00000374429 TXNDC2Q86VQ3 553 aa14.12□□□□□ -0.15
CXCL12-203ENST00000374429 PKNOX2Q96KN3 472 aa14.12□□□□□ -0.15
CXCL12-203ENST00000374429 ANP32AP39687 249 aaKnown RBP14.12□□□□□ -0.15
CXCL12-203ENST00000374429 COG6Q9Y2V7 657 aa14.11□□□□□ -0.15
CXCL12-203ENST00000374429 HMOX1P09601 288 aa14.1□□□□□ -0.15
CXCL12-203ENST00000374429 PANK1Q8TE04 598 aa14.1□□□□□ -0.15
CXCL12-203ENST00000374429 VGFO15240 615 aaPredicted RBP14.1□□□□□ -0.15
CXCL12-203ENST00000374429 CABP1Q9NZU7 370 aa14.09□□□□□ -0.15
CXCL12-203ENST00000374429 SHANK2Q9UPX8 1470 aa14.09□□□□□ -0.15
CXCL12-203ENST00000374429 TSR2Q969E8 191 aaKnown RBP14.09□□□□□ -0.15
CXCL12-203ENST00000374429 PAK3O75914 559 aaPredicted RBP14.08□□□□□ -0.15
CXCL12-203ENST00000374429 SLC26A8Q96RN1 970 aa14.08□□□□□ -0.15
CXCL12-203ENST00000374429 ZCCHC11Q5TAX3 1644 aaKnown RBP14.08□□□□□ -0.16
CXCL12-203ENST00000374429 NUTM2GQ5VZR2 741 aa14.07□□□□□ -0.16
CXCL12-203ENST00000374429 PODXL2Q9NZ53 605 aa14.07□□□□□ -0.16
CXCL12-203ENST00000374429 DAXXQ9UER7 740 aaPredicted RBP14.07□□□□□ -0.16
CXCL12-203ENST00000374429 TNNQ9UQP3 1299 aa14.07□□□□□ -0.16
CXCL12-203ENST00000374429 DUOX2Q9NRD8 1548 aa14.07□□□□□ -0.16
CXCL12-203ENST00000374429 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
CXCL12-203ENST00000374429 ADGBQ8N7X0 1667 aa14.07□□□□□ -0.16
CXCL12-203ENST00000374429 EIF3AQ14152 1382 aaKnown RBP14.06□□□□□ -0.16
CXCL12-203ENST00000374429 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
CXCL12-203ENST00000374429 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
CXCL12-203ENST00000374429 THUMPD2Q9BTF0 503 aaKnown RBP14.05□□□□□ -0.16
CXCL12-203ENST00000374429 UHRF1BP1Q6BDS2 1440 aa14.05□□□□□ -0.16
CXCL12-203ENST00000374429 KDM5CP41229 1560 aa14.05□□□□□ -0.16
CXCL12-203ENST00000374429 ZBTB47Q9UFB7 747 aaPredicted RBP14.05□□□□□ -0.16
CXCL12-203ENST00000374429 PREX2Q70Z35 1606 aa14.04□□□□□ -0.16
CXCL12-203ENST00000374429 PLEKHH1Q9ULM0 1364 aa14.04□□□□□ -0.16
CXCL12-203ENST00000374429 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
CXCL12-203ENST00000374429 LMOD2Q6P5Q4 547 aa14.03□□□□□ -0.16
CXCL12-203ENST00000374429 NSD3Q9BZ95 1437 aa14.03□□□□□ -0.16
CXCL12-203ENST00000374429 MAGI2Q86UL8 1455 aa14.03□□□□□ -0.16
CXCL12-203ENST00000374429 EVC2Q86UK5 1308 aa14.03□□□□□ -0.16
CXCL12-203ENST00000374429 ATP10AO60312 1499 aa14.03□□□□□ -0.16
CXCL12-203ENST00000374429 PARD3Q8TEW0 1356 aa14.02□□□□□ -0.16
CXCL12-203ENST00000374429 YEATS2Q9ULM3 1422 aa14.02□□□□□ -0.16
CXCL12-203ENST00000374429 CDK19Q9BWU1 502 aa14.02□□□□□ -0.17
CXCL12-203ENST00000374429 MAPK8IP3Q9UPT6 1336 aa14.01□□□□□ -0.17
CXCL12-203ENST00000374429 RRS1Q15050 365 aaKnown RBP14.01□□□□□ -0.17
CXCL12-203ENST00000374429 PMFBP1Q8TBY8 1022 aa14.01□□□□□ -0.17
CXCL12-203ENST00000374429 MYO5CQ9NQX4 1742 aa14.01□□□□□ -0.17
CXCL12-203ENST00000374429 SPRYD3Q8NCJ5 442 aa14.01□□□□□ -0.17
CXCL12-203ENST00000374429 ARXQ96QS3 562 aa14.01□□□□□ -0.17
CXCL12-203ENST00000374429 NEFMP07197 916 aa14.01□□□□□ -0.17
CXCL12-203ENST00000374429 CGNL1Q0VF96 1302 aa14□□□□□ -0.17
CXCL12-203ENST00000374429 GOLGA6L2Q8N9W4 650 aaPredicted RBP14□□□□□ -0.17
CXCL12-203ENST00000374429 LTV1Q96GA3 475 aaPredicted RBP14□□□□□ -0.17
CXCL12-203ENST00000374429 C14orf93Q9H972 538 aaKnown RBP14□□□□□ -0.17
CXCL12-203ENST00000374429 ADCY10Q96PN6 1610 aa14□□□□□ -0.17
CXCL12-203ENST00000374429 DUSP27Q5VZP5 1158 aa13.99□□□□□ -0.17
CXCL12-203ENST00000374429 ERICH6BQ5W0A0 696 aa13.99□□□□□ -0.17
CXCL12-203ENST00000374429 KDM5DQ9BY66 1539 aa13.99□□□□□ -0.17
CXCL12-203ENST00000374429 ARHGEF5Q12774 1597 aa13.99□□□□□ -0.17
CXCL12-203ENST00000374429 PDE4AP27815 886 aa13.99□□□□□ -0.17
CXCL12-203ENST00000374429 FTSJ3Q8IY81 847 aaKnown RBP13.99□□□□□ -0.17
CXCL12-203ENST00000374429 ZNF428Q96B54 188 aa13.99□□□□□ -0.17
CXCL12-203ENST00000374429 ATP7AQ04656 1500 aa13.99□□□□□ -0.17
CXCL12-203ENST00000374429 APBB1O00213 710 aa13.98□□□□□ -0.17
CXCL12-203ENST00000374429 SCAF11Q99590 1463 aaKnown RBP13.98□□□□□ -0.17
CXCL12-203ENST00000374429 CROCC2H7BZ55 1655 aa13.97□□□□□ -0.17
CXCL12-203ENST00000374429 HDGFL2Q7Z4V5 671 aaPredicted RBP13.97□□□□□ -0.17
CXCL12-203ENST00000374429 PDE3BQ13370 1112 aa13.97□□□□□ -0.17
CXCL12-203ENST00000374429 NOP58Q9Y2X3 529 aaKnown RBP13.97□□□□□ -0.17
CXCL12-203ENST00000374429 ABCC1P33527 1531 aa13.97□□□□□ -0.17
CXCL12-203ENST00000374429 NPATQ14207 1427 aa13.97□□□□□ -0.17
CXCL12-203ENST00000374429 WWC1Q8IX03 1113 aa13.97□□□□□ -0.17
CXCL12-203ENST00000374429 DCTN1Q14203 1278 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms