RNA–Protein interactions for RNA: ENST00000373895.7

TFAM-201, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2 BASIC

Gene TFAM, Length 973 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-201ENST00000373895 TMEM2Q9UHN6 1383 aa18.93■□□□□ 0.62
TFAM-201ENST00000373895 HSPA1LP34931 641 aa18.92■□□□□ 0.62
TFAM-201ENST00000373895 NOS1P29475 1434 aa18.91■□□□□ 0.62
TFAM-201ENST00000373895 ALKQ9UM73 1620 aa18.91■□□□□ 0.62
TFAM-201ENST00000373895 KDM5AP29375 1690 aaKnown RBP18.9■□□□□ 0.62
TFAM-201ENST00000373895 ITGAEP38570 1179 aa18.88■□□□□ 0.61
TFAM-201ENST00000373895 TET3O43151 1660 aa18.87■□□□□ 0.61
TFAM-201ENST00000373895 ADGRB3O60242 1522 aa18.86■□□□□ 0.61
TFAM-201ENST00000373895 CAPN15O75808 1086 aa18.86■□□□□ 0.61
TFAM-201ENST00000373895 SLC52A1Q9NWF4 448 aa18.86■□□□□ 0.61
TFAM-201ENST00000373895 UNC13BO14795 1591 aa18.85■□□□□ 0.61
TFAM-201ENST00000373895 RPRD2Q5VT52 1461 aaKnown RBP18.85■□□□□ 0.61
TFAM-201ENST00000373895 XIRP1Q702N8 1843 aaKnown RBP18.85■□□□□ 0.61
TFAM-201ENST00000373895 MYO5BQ9ULV0 1848 aa18.85■□□□□ 0.61
TFAM-201ENST00000373895 SLC26A8Q96RN1 970 aa18.84■□□□□ 0.61
TFAM-201ENST00000373895 GCC2Q8IWJ2 1684 aa18.84■□□□□ 0.61
TFAM-201ENST00000373895 ROCK1Q13464 1354 aa18.83■□□□□ 0.61
TFAM-201ENST00000373895 BCANQ96GW7 911 aa18.81■□□□□ 0.6
TFAM-201ENST00000373895 E9PCH4 1651 aa18.81■□□□□ 0.6
TFAM-201ENST00000373895 SOCS7O14512 581 aa18.79■□□□□ 0.6
TFAM-201ENST00000373895 TMEM131LA2VDJ0 1609 aa18.78■□□□□ 0.6
TFAM-201ENST00000373895 IQGAP3Q86VI3 1631 aa18.78■□□□□ 0.6
TFAM-201ENST00000373895 CHGAP10645 457 aaKnown RBP18.78■□□□□ 0.6
TFAM-201ENST00000373895 KCNA6P17658 529 aa18.78■□□□□ 0.6
TFAM-201ENST00000373895 MED1Q15648 1581 aaPredicted RBP18.77■□□□□ 0.6
TFAM-201ENST00000373895 RBM33Q96EV2 1170 aaKnown RBP18.77■□□□□ 0.6
TFAM-201ENST00000373895 NUP155O75694 1391 aa18.77■□□□□ 0.6
TFAM-201ENST00000373895 ZFYVE9O95405 1425 aa18.76■□□□□ 0.59
TFAM-201ENST00000373895 RIMS2Q9UQ26 1411 aa18.76■□□□□ 0.59
TFAM-201ENST00000373895 PROSER2Q86WR7 435 aaPredicted RBP18.76■□□□□ 0.59
TFAM-201ENST00000373895 SPINK5Q9NQ38 1064 aaPredicted RBP18.76■□□□□ 0.59
TFAM-201ENST00000373895 TMEM94Q12767 1356 aa18.76■□□□□ 0.59
TFAM-201ENST00000373895 PPP1R15AO75807 674 aaPredicted RBP18.75■□□□□ 0.59
TFAM-201ENST00000373895 SLC4A2P04920 1241 aa18.73■□□□□ 0.59
TFAM-201ENST00000373895 HDGFP51858 240 aaKnown RBP18.73■□□□□ 0.59
TFAM-201ENST00000373895 NUTM2DQ5VT03 806 aaPredicted RBP18.73■□□□□ 0.59
TFAM-201ENST00000373895 PLEKHG1Q9ULL1 1385 aa18.72■□□□□ 0.59
TFAM-201ENST00000373895 NWD1Q149M9 1564 aa18.71■□□□□ 0.59
TFAM-201ENST00000373895 CHD2O14647 1828 aaKnown RBP18.7■□□□□ 0.58
TFAM-201ENST00000373895 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.69■□□□□ 0.58
TFAM-201ENST00000373895 NKTRP30414 1462 aaKnown RBP18.69■□□□□ 0.58
TFAM-201ENST00000373895 FAM135BQ49AJ0 1406 aa18.66■□□□□ 0.58
TFAM-201ENST00000373895 RRBP1Q9P2E9 1410 aaKnown RBP18.66■□□□□ 0.58
TFAM-201ENST00000373895 TBX22Q9Y458 520 aa18.66■□□□□ 0.58
TFAM-201ENST00000373895 DSG3P32926 999 aa18.65■□□□□ 0.58
TFAM-201ENST00000373895 SPHKAPQ2M3C7 1700 aa18.65■□□□□ 0.58
TFAM-201ENST00000373895 ROBO1Q9Y6N7 1651 aa18.64■□□□□ 0.57
TFAM-201ENST00000373895 ADAMTS13Q76LX8 1427 aa18.64■□□□□ 0.57
TFAM-201ENST00000373895 MSH6P52701 1360 aa18.63■□□□□ 0.57
TFAM-201ENST00000373895 NAIPQ13075 1403 aa18.61■□□□□ 0.57
TFAM-201ENST00000373895 SLAIN2Q9P270 581 aa18.6■□□□□ 0.57
TFAM-201ENST00000373895 DIP2AQ14689 1571 aa18.59■□□□□ 0.57
TFAM-201ENST00000373895 ZNF326Q5BKZ1 582 aaKnown RBP18.59■□□□□ 0.57
TFAM-201ENST00000373895 C14orf37Q86TY3 774 aa18.58■□□□□ 0.56
TFAM-201ENST00000373895 TRPM2O94759 1503 aa18.57■□□□□ 0.56
TFAM-201ENST00000373895 PTPRUQ92729 1446 aa18.57■□□□□ 0.56
TFAM-201ENST00000373895 CLTCL1P53675 1640 aa18.56■□□□□ 0.56
TFAM-201ENST00000373895 PIK3R4Q99570 1358 aa18.56■□□□□ 0.56
TFAM-201ENST00000373895 TRIM52Q96A61 297 aa18.56■□□□□ 0.56
TFAM-201ENST00000373895 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
TFAM-201ENST00000373895 NRXN3Q9Y4C0 1643 aa18.56■□□□□ 0.56
TFAM-201ENST00000373895 PHLPP1O60346 1717 aa18.54■□□□□ 0.56
TFAM-201ENST00000373895 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
TFAM-201ENST00000373895 NCOA3Q9Y6Q9 1424 aa18.54■□□□□ 0.56
TFAM-201ENST00000373895 RGS17Q9UGC6 210 aaPredicted RBP18.53■□□□□ 0.56
TFAM-201ENST00000373895 KIF1BO60333 1816 aa18.53■□□□□ 0.56
TFAM-201ENST00000373895 SETBP1Q9Y6X0 1596 aa18.52■□□□□ 0.56
TFAM-201ENST00000373895 HFM1A2PYH4 1435 aa18.52■□□□□ 0.56
TFAM-201ENST00000373895 C19orf44Q9H6X5 657 aa18.52■□□□□ 0.56
TFAM-201ENST00000373895 ZNF219Q9P2Y4 722 aaPredicted RBP18.52■□□□□ 0.56
TFAM-201ENST00000373895 NEXMIFQ5QGS0 1516 aa18.5■□□□□ 0.55
TFAM-201ENST00000373895 ATF3P18847 181 aa18.5■□□□□ 0.55
TFAM-201ENST00000373895 CADPS2Q86UW7 1296 aa18.49■□□□□ 0.55
TFAM-201ENST00000373895 METP08581 1390 aa18.49■□□□□ 0.55
TFAM-201ENST00000373895 XRN1Q8IZH2 1706 aaKnown RBP18.49■□□□□ 0.55
TFAM-201ENST00000373895 SAMD1Q6SPF0 538 aaPredicted RBP18.48■□□□□ 0.55
TFAM-201ENST00000373895 SLC4A1APQ9BWU0 796 aaKnown RBP18.48■□□□□ 0.55
TFAM-201ENST00000373895 COL16A1Q07092 1604 aaPredicted RBP18.46■□□□□ 0.55
TFAM-201ENST00000373895 JCADQ9P266 1359 aa18.45■□□□□ 0.54
TFAM-201ENST00000373895 POTEAQ6S8J7 498 aa18.43■□□□□ 0.54
TFAM-201ENST00000373895 BRINP3Q76B58 766 aa18.42■□□□□ 0.54
TFAM-201ENST00000373895 VGFO15240 615 aaPredicted RBP18.41■□□□□ 0.54
TFAM-201ENST00000373895 AHDC1Q5TGY3 1603 aaPredicted RBP18.41■□□□□ 0.54
TFAM-201ENST00000373895 DCCP43146 1447 aa18.4■□□□□ 0.54
TFAM-201ENST00000373895 SETD1AO15047 1707 aaKnown RBP18.39■□□□□ 0.53
TFAM-201ENST00000373895 PPLO60437 1756 aa18.39■□□□□ 0.53
TFAM-201ENST00000373895 NALCNQ8IZF0 1738 aa18.38■□□□□ 0.53
TFAM-201ENST00000373895 RPGRIP1LQ68CZ1 1315 aa18.38■□□□□ 0.53
TFAM-201ENST00000373895 MST1RQ04912 1400 aa18.38■□□□□ 0.53
TFAM-201ENST00000373895 ABCB7O75027 752 aa18.37■□□□□ 0.53
TFAM-201ENST00000373895 ADGRL3Q9HAR2 1447 aa18.37■□□□□ 0.53
TFAM-201ENST00000373895 LRP6O75581 1613 aa18.36■□□□□ 0.53
TFAM-201ENST00000373895 ASXL1Q8IXJ9 1541 aa18.36■□□□□ 0.53
TFAM-201ENST00000373895 SHPRHQ149N8 1683 aa18.35■□□□□ 0.53
TFAM-201ENST00000373895 SPATA31A6Q5VVP1 1343 aa18.35■□□□□ 0.53
TFAM-201ENST00000373895 MPHOSPH9Q99550 1183 aa18.35■□□□□ 0.53
TFAM-201ENST00000373895 MEX3CQ5U5Q3 659 aaKnown RBP18.34■□□□□ 0.53
TFAM-201ENST00000373895 DDX17Q92841 729 aaKnown RBP18.34■□□□□ 0.53
TFAM-201ENST00000373895 ROBO2Q9HCK4 1378 aa18.33■□□□□ 0.53
TFAM-201ENST00000373895 RGL3Q3MIN7 710 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms