RNA–Protein interactions for RNA: ENST00000371437.4

NDUFA1-201, Transcript of NADH:ubiquinone oxidoreductase subunit A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFA1, Length 766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1-201ENST00000371437 NKTRP30414 1462 aaKnown RBP28.56■■■□□ 2.16
NDUFA1-201ENST00000371437 ZFYVE9O95405 1425 aa28.55■■■□□ 2.16
NDUFA1-201ENST00000371437 ANKRD50Q9ULJ7 1429 aa28.55■■■□□ 2.16
NDUFA1-201ENST00000371437 SLC26A8Q96RN1 970 aa28.55■■■□□ 2.16
NDUFA1-201ENST00000371437 E9PCH4 1651 aa28.53■■■□□ 2.16
NDUFA1-201ENST00000371437 RGS17Q9UGC6 210 aaPredicted RBP28.52■■■□□ 2.16
NDUFA1-201ENST00000371437 SLC52A1Q9NWF4 448 aa28.51■■■□□ 2.15
NDUFA1-201ENST00000371437 RBM33Q96EV2 1170 aaKnown RBP28.49■■■□□ 2.15
NDUFA1-201ENST00000371437 FAM50AQ14320 339 aaKnown RBP28.46■■■□□ 2.15
NDUFA1-201ENST00000371437 PROSER2Q86WR7 435 aaPredicted RBP28.46■■■□□ 2.15
NDUFA1-201ENST00000371437 IQGAP3Q86VI3 1631 aa28.46■■■□□ 2.15
NDUFA1-201ENST00000371437 PHLPP1O60346 1717 aa28.45■■■□□ 2.14
NDUFA1-201ENST00000371437 PLEKHG1Q9ULL1 1385 aa28.45■■■□□ 2.14
NDUFA1-201ENST00000371437 RIMS2Q9UQ26 1411 aa28.44■■■□□ 2.14
NDUFA1-201ENST00000371437 MSH6P52701 1360 aa28.37■■■□□ 2.13
NDUFA1-201ENST00000371437 COL16A1Q07092 1604 aaPredicted RBP28.36■■■□□ 2.13
NDUFA1-201ENST00000371437 ADAMTS13Q76LX8 1427 aa28.36■■■□□ 2.13
NDUFA1-201ENST00000371437 DIP2AQ14689 1571 aa28.36■■■□□ 2.13
NDUFA1-201ENST00000371437 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.35■■■□□ 2.13
NDUFA1-201ENST00000371437 ROCK1Q13464 1354 aa28.34■■■□□ 2.13
NDUFA1-201ENST00000371437 BCANQ96GW7 911 aa28.33■■■□□ 2.13
NDUFA1-201ENST00000371437 POTEAQ6S8J7 498 aa28.31■■■□□ 2.12
NDUFA1-201ENST00000371437 SETD1AO15047 1707 aaKnown RBP28.29■■■□□ 2.12
NDUFA1-201ENST00000371437 NRXN3Q9Y4C0 1643 aa28.29■■■□□ 2.12
NDUFA1-201ENST00000371437 PPP1R15AO75807 674 aaPredicted RBP28.29■■■□□ 2.12
NDUFA1-201ENST00000371437 SLAIN2Q9P270 581 aa28.29■■■□□ 2.12
NDUFA1-201ENST00000371437 TBX22Q9Y458 520 aa28.29■■■□□ 2.12
NDUFA1-201ENST00000371437 SPHKAPQ2M3C7 1700 aa28.29■■■□□ 2.12
NDUFA1-201ENST00000371437 NCOA3Q9Y6Q9 1424 aa28.28■■■□□ 2.12
NDUFA1-201ENST00000371437 HDGFP51858 240 aaKnown RBP28.25■■■□□ 2.11
NDUFA1-201ENST00000371437 NUTM2DQ5VT03 806 aaPredicted RBP28.25■■■□□ 2.11
NDUFA1-201ENST00000371437 AHDC1Q5TGY3 1603 aaPredicted RBP28.25■■■□□ 2.11
NDUFA1-201ENST00000371437 TRPM2O94759 1503 aa28.24■■■□□ 2.11
NDUFA1-201ENST00000371437 XRN1Q8IZH2 1706 aaKnown RBP28.24■■■□□ 2.11
NDUFA1-201ENST00000371437 CHGAP10645 457 aaKnown RBP28.24■■■□□ 2.11
NDUFA1-201ENST00000371437 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.24■■■□□ 2.11
NDUFA1-201ENST00000371437 JCADQ9P266 1359 aa28.24■■■□□ 2.11
NDUFA1-201ENST00000371437 SHPRHQ149N8 1683 aa28.23■■■□□ 2.11
NDUFA1-201ENST00000371437 PTPRUQ92729 1446 aa28.23■■■□□ 2.11
NDUFA1-201ENST00000371437 PIK3R4Q99570 1358 aa28.23■■■□□ 2.11
NDUFA1-201ENST00000371437 LRP6O75581 1613 aa28.21■■■□□ 2.11
NDUFA1-201ENST00000371437 NUP155O75694 1391 aa28.19■■■□□ 2.1
NDUFA1-201ENST00000371437 SETBP1Q9Y6X0 1596 aa28.18■■■□□ 2.1
NDUFA1-201ENST00000371437 CLTCL1P53675 1640 aa28.13■■■□□ 2.09
NDUFA1-201ENST00000371437 NHSL1Q5SYE7 1610 aa28.11■■■□□ 2.09
NDUFA1-201ENST00000371437 C19orf44Q9H6X5 657 aa28.11■■■□□ 2.09
NDUFA1-201ENST00000371437 CADPS2Q86UW7 1296 aa28.1■■■□□ 2.09
NDUFA1-201ENST00000371437 NEXMIFQ5QGS0 1516 aa28.09■■■□□ 2.09
NDUFA1-201ENST00000371437 ITGAEP38570 1179 aa28.09■■■□□ 2.09
NDUFA1-201ENST00000371437 C14orf37Q86TY3 774 aa28.09■■■□□ 2.09
NDUFA1-201ENST00000371437 AMOTL2Q9Y2J4 779 aa28.09■■■□□ 2.09
NDUFA1-201ENST00000371437 KIF1BO60333 1816 aa28.08■■■□□ 2.09
NDUFA1-201ENST00000371437 NALCNQ8IZF0 1738 aa28.08■■■□□ 2.09
NDUFA1-201ENST00000371437 DCCP43146 1447 aa28.08■■■□□ 2.09
NDUFA1-201ENST00000371437 SPATA31A6Q5VVP1 1343 aa28.07■■■□□ 2.08
NDUFA1-201ENST00000371437 ASXL1Q8IXJ9 1541 aa28.06■■■□□ 2.08
NDUFA1-201ENST00000371437 ATF3P18847 181 aa28.05■■■□□ 2.08
NDUFA1-201ENST00000371437 BRINP3Q76B58 766 aa28.04■■■□□ 2.08
NDUFA1-201ENST00000371437 MST1RQ04912 1400 aa28.03■■■□□ 2.08
NDUFA1-201ENST00000371437 METP08581 1390 aa28.02■■■□□ 2.08
NDUFA1-201ENST00000371437 PPARGC1BQ86YN6 1023 aaKnown RBP28.01■■■□□ 2.07
NDUFA1-201ENST00000371437 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
NDUFA1-201ENST00000371437 ADGRL3Q9HAR2 1447 aa27.95■■■□□ 2.07
NDUFA1-201ENST00000371437 RRBP1Q9P2E9 1410 aaKnown RBP27.95■■■□□ 2.07
NDUFA1-201ENST00000371437 NAIPQ13075 1403 aa27.93■■■□□ 2.06
NDUFA1-201ENST00000371437 ZNF326Q5BKZ1 582 aaKnown RBP27.93■■■□□ 2.06
NDUFA1-201ENST00000371437 MEX3CQ5U5Q3 659 aaKnown RBP27.93■■■□□ 2.06
NDUFA1-201ENST00000371437 LAMC1P11047 1609 aa27.92■■■□□ 2.06
NDUFA1-201ENST00000371437 PPLO60437 1756 aa27.91■■■□□ 2.06
NDUFA1-201ENST00000371437 ZNF772Q68DY9 489 aaPredicted RBP27.91■■■□□ 2.06
NDUFA1-201ENST00000371437 PTCH1Q13635 1447 aa27.85■■■□□ 2.05
NDUFA1-201ENST00000371437 NUTM2BA6NNL0 878 aaPredicted RBP27.85■■■□□ 2.05
NDUFA1-201ENST00000371437 NUTM2EB1AL46 878 aaPredicted RBP27.85■■■□□ 2.05
NDUFA1-201ENST00000371437 NUTM2AQ8IVF1 878 aaPredicted RBP27.85■■■□□ 2.05
NDUFA1-201ENST00000371437 TRIM52Q96A61 297 aa27.85■■■□□ 2.05
NDUFA1-201ENST00000371437 CDK12Q9NYV4 1490 aaPredicted RBP27.84■■■□□ 2.05
NDUFA1-201ENST00000371437 DDX17Q92841 729 aaKnown RBP27.84■■■□□ 2.05
NDUFA1-201ENST00000371437 PNPLA6Q8IY17 1366 aa27.84■■■□□ 2.05
NDUFA1-201ENST00000371437 PRAG1Q86YV5 1406 aa27.84■■■□□ 2.05
NDUFA1-201ENST00000371437 UPF1Q92900 1129 aaKnown RBP eCLIP27.83■■■□□ 2.05
NDUFA1-201ENST00000371437 C1orf167Q5SNV9 1468 aa27.82■■■□□ 2.04
NDUFA1-201ENST00000371437 AFF2P51816 1311 aa27.8■■■□□ 2.04
NDUFA1-201ENST00000371437 ROBO2Q9HCK4 1378 aa27.79■■■□□ 2.04
NDUFA1-201ENST00000371437 HFM1A2PYH4 1435 aa27.78■■■□□ 2.04
NDUFA1-201ENST00000371437 RXRBP28702 533 aa27.78■■■□□ 2.04
NDUFA1-201ENST00000371437 LRRC59Q96AG4 307 aaKnown RBP27.78■■■□□ 2.04
NDUFA1-201ENST00000371437 IFT172Q9UG01 1749 aa27.75■■■□□ 2.03
NDUFA1-201ENST00000371437 RGS12O14924 1447 aa27.74■■■□□ 2.03
NDUFA1-201ENST00000371437 COL22A1Q8NFW1 1626 aaPredicted RBP27.74■■■□□ 2.03
NDUFA1-201ENST00000371437 CDC42BPGQ6DT37 1551 aa27.7■■■□□ 2.03
NDUFA1-201ENST00000371437 VGFO15240 615 aaPredicted RBP27.7■■■□□ 2.02
NDUFA1-201ENST00000371437 C8orf37Q96NL8 207 aa27.7■■■□□ 2.02
NDUFA1-201ENST00000371437 MARF1Q9Y4F3 1742 aaKnown RBP27.7■■■□□ 2.02
NDUFA1-201ENST00000371437 SOS2Q07890 1332 aaPredicted RBP27.69■■■□□ 2.02
NDUFA1-201ENST00000371437 ORAI2Q96SN7 254 aa27.69■■■□□ 2.02
NDUFA1-201ENST00000371437 RPGRIP1LQ68CZ1 1315 aa27.67■■■□□ 2.02
NDUFA1-201ENST00000371437 KNDC1Q76NI1 1749 aa27.67■■■□□ 2.02
NDUFA1-201ENST00000371437 SLC4A1APQ9BWU0 796 aaKnown RBP27.64■■■□□ 2.02
NDUFA1-201ENST00000371437 RBM6P78332 1123 aaKnown RBP27.63■■■□□ 2.01
NDUFA1-201ENST00000371437 QTRT2Q9H974 415 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms