RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 MSH5O43196 834 aa27.19■■□□□ 1.94
TM9SF3-201ENST00000371142 ATP6V1DQ9Y5K8 247 aa27.19■■□□□ 1.94
TM9SF3-201ENST00000371142 TSR1Q2NL82 804 aaKnown RBP27.18■■□□□ 1.94
TM9SF3-201ENST00000371142 ANO2Q9NQ90 1003 aa27.17■■□□□ 1.94
TM9SF3-201ENST00000371142 DIAPH1O60610 1272 aaKnown RBP27.15■■□□□ 1.94
TM9SF3-201ENST00000371142 TOP2AP11388 1531 aaKnown RBP27.14■■□□□ 1.94
TM9SF3-201ENST00000371142 WWC1Q8IX03 1113 aa27.14■■□□□ 1.94
TM9SF3-201ENST00000371142 ZBED9Q6R2W3 1325 aa27.14■■□□□ 1.93
TM9SF3-201ENST00000371142 RIPK4P57078 832 aa27.14■■□□□ 1.93
TM9SF3-201ENST00000371142 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.13■■□□□ 1.93
TM9SF3-201ENST00000371142 IFIT2P09913 472 aaKnown RBP27.13■■□□□ 1.93
TM9SF3-201ENST00000371142 APPP05067 770 aa27.13■■□□□ 1.93
TM9SF3-201ENST00000371142 RUFY2Q8WXA3 655 aa27.13■■□□□ 1.93
TM9SF3-201ENST00000371142 SKOR2Q2VWA4 1001 aaPredicted RBP27.13■■□□□ 1.93
TM9SF3-201ENST00000371142 TPM2P07951 284 aa27.12■■□□□ 1.93
TM9SF3-201ENST00000371142 CHMP4CQ96CF2 233 aa27.12■■□□□ 1.93
TM9SF3-201ENST00000371142 DDX19BQ9UMR2 479 aa27.12■■□□□ 1.93
TM9SF3-201ENST00000371142 TRIM29Q14134 588 aa27.11■■□□□ 1.93
TM9SF3-201ENST00000371142 SYTL4Q96C24 671 aaPredicted RBP27.11■■□□□ 1.93
TM9SF3-201ENST00000371142 NOL10Q9BSC4 688 aaKnown RBP27.11■■□□□ 1.93
TM9SF3-201ENST00000371142 ZKSCAN1P17029 563 aaPredicted RBP27.1■■□□□ 1.93
TM9SF3-201ENST00000371142 LRRFIP1Q32MZ4 808 aaKnown RBP27.1■■□□□ 1.93
TM9SF3-201ENST00000371142 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
TM9SF3-201ENST00000371142 TPM1P09493 284 aa27.09■■□□□ 1.93
TM9SF3-201ENST00000371142 REC8O95072 547 aa27.09■■□□□ 1.93
TM9SF3-201ENST00000371142 GSE1Q14687 1217 aa27.09■■□□□ 1.93
TM9SF3-201ENST00000371142 AMOTL1Q8IY63 956 aa27.09■■□□□ 1.93
TM9SF3-201ENST00000371142 USP35Q9P2H5 1018 aa27.09■■□□□ 1.93
TM9SF3-201ENST00000371142 ZNF592Q92610 1267 aa27.09■■□□□ 1.93
TM9SF3-201ENST00000371142 DZIP1LQ8IYY4 767 aaKnown RBP27.08■■□□□ 1.93
TM9SF3-201ENST00000371142 TRIM34Q9BYJ4 488 aa27.08■■□□□ 1.93
TM9SF3-201ENST00000371142 CPLX2Q6PUV4 134 aaKnown RBP27.08■■□□□ 1.93
TM9SF3-201ENST00000371142 PCMTD1Q96MG8 357 aaPredicted RBP27.07■■□□□ 1.92
TM9SF3-201ENST00000371142 FKBP5Q13451 457 aaPredicted RBP27.07■■□□□ 1.92
TM9SF3-201ENST00000371142 TCEAL9Q9UHQ7 104 aa27.06■■□□□ 1.92
TM9SF3-201ENST00000371142 CPLX1O14810 134 aa27.06■■□□□ 1.92
TM9SF3-201ENST00000371142 FBXW7Q969H0 707 aa27.05■■□□□ 1.92
TM9SF3-201ENST00000371142 PSME1Q06323 249 aa27.05■■□□□ 1.92
TM9SF3-201ENST00000371142 VPS37DQ86XT2 251 aa27.04■■□□□ 1.92
TM9SF3-201ENST00000371142 API5Q9BZZ5 524 aaKnown RBP27.04■■□□□ 1.92
TM9SF3-201ENST00000371142 DHX16O60231 1041 aaKnown RBP27.04■■□□□ 1.92
TM9SF3-201ENST00000371142 FOSBP53539 338 aa27.03■■□□□ 1.92
TM9SF3-201ENST00000371142 G3BP1Q13283 466 aaKnown RBP eCLIP27.03■■□□□ 1.925e-6■■□□□ 11.9
TM9SF3-201ENST00000371142 DDX58O95786 925 aaKnown RBP27.02■■□□□ 1.92
TM9SF3-201ENST00000371142 HSP90AA2PQ14568 343 aaPredicted RBP27.02■■□□□ 1.92
TM9SF3-201ENST00000371142 BICD2Q8TD16 824 aa27.02■■□□□ 1.92
TM9SF3-201ENST00000371142 CTDP1Q9Y5B0 961 aaPredicted RBP27.02■■□□□ 1.92
TM9SF3-201ENST00000371142 PTPRGP23470 1445 aa27.01■■□□□ 1.91
TM9SF3-201ENST00000371142 NFXL1Q6ZNB6 911 aa27.01■■□□□ 1.91
TM9SF3-201ENST00000371142 HMOX1P09601 288 aa27■■□□□ 1.91
TM9SF3-201ENST00000371142 TSPYL4Q9UJ04 414 aa26.99■■□□□ 1.91
TM9SF3-201ENST00000371142 TRDNQ13061 729 aa26.99■■□□□ 1.91
TM9SF3-201ENST00000371142 VPS37CA5D8V6 355 aaPredicted RBP26.99■■□□□ 1.91
TM9SF3-201ENST00000371142 RUNDC1Q96C34 613 aa26.99■■□□□ 1.91
TM9SF3-201ENST00000371142 ROCK1Q13464 1354 aa26.98■■□□□ 1.91
TM9SF3-201ENST00000371142 CYB5RLQ6IPT4 315 aa26.98■■□□□ 1.91
TM9SF3-201ENST00000371142 RNF20Q5VTR2 975 aa26.97■■□□□ 1.91
TM9SF3-201ENST00000371142 CCDC70Q6NSX1 233 aa26.96■■□□□ 1.91
TM9SF3-201ENST00000371142 RUSC2Q8N2Y8 1516 aa26.96■■□□□ 1.91
TM9SF3-201ENST00000371142 LNPKQ9C0E8 428 aa26.96■■□□□ 1.91
TM9SF3-201ENST00000371142 CCDC47Q96A33 483 aaKnown RBP26.95■■□□□ 1.9
TM9SF3-201ENST00000371142 INTS3Q68E01 1043 aaKnown RBP26.94■■□□□ 1.9
TM9SF3-201ENST00000371142 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.94■■□□□ 1.9
TM9SF3-201ENST00000371142 SMC3Q9UQE7 1217 aa26.93■■□□□ 1.9
TM9SF3-201ENST00000371142 ERICH2A1L162 156 aa26.92■■□□□ 1.9
TM9SF3-201ENST00000371142 AIMP1Q12904 312 aaKnown RBP26.92■■□□□ 1.9
TM9SF3-201ENST00000371142 CHMP5Q9NZZ3 219 aa26.92■■□□□ 1.9
TM9SF3-201ENST00000371142 ANKRD20A12PQ8NF67 263 aa26.92■■□□□ 1.9
TM9SF3-201ENST00000371142 IPO7O95373 1038 aaKnown RBP26.92■■□□□ 1.9
TM9SF3-201ENST00000371142 RSPH6AQ9H0K4 717 aa26.91■■□□□ 1.9
TM9SF3-201ENST00000371142 HOMER1Q86YM7 354 aa26.9■■□□□ 1.9
TM9SF3-201ENST00000371142 GNAI1P63096 354 aa26.9■■□□□ 1.9
TM9SF3-201ENST00000371142 NUTM2GQ5VZR2 741 aa26.9■■□□□ 1.9
TM9SF3-201ENST00000371142 NEUROD6Q96NK8 337 aa26.9■■□□□ 1.9
TM9SF3-201ENST00000371142 GPS2Q13227 327 aa26.89■■□□□ 1.9
TM9SF3-201ENST00000371142 MEX3CQ5U5Q3 659 aaKnown RBP26.89■■□□□ 1.9
TM9SF3-201ENST00000371142 HOOK1Q9UJC3 728 aaKnown RBP26.89■■□□□ 1.9
TM9SF3-201ENST00000371142 SAMD1Q6SPF0 538 aaPredicted RBP26.89■■□□□ 1.9
TM9SF3-201ENST00000371142 RIC3Q7Z5B4 369 aa26.89■■□□□ 1.9
TM9SF3-201ENST00000371142 GGNBP2Q9H3C7 697 aa26.89■■□□□ 1.9
TM9SF3-201ENST00000371142 PATL2C9JE40 543 aaKnown RBP26.89■■□□□ 1.89
TM9SF3-201ENST00000371142 PANK1Q8TE04 598 aa26.89■■□□□ 1.89
TM9SF3-201ENST00000371142 SETQ01105 290 aaPredicted RBP26.88■■□□□ 1.89
TM9SF3-201ENST00000371142 FYB1O15117 783 aa26.87■■□□□ 1.89
TM9SF3-201ENST00000371142 SASS6Q6UVJ0 657 aa26.87■■□□□ 1.89
TM9SF3-201ENST00000371142 ERC2O15083 957 aa26.86■■□□□ 1.89
TM9SF3-201ENST00000371142 CABP2Q9NPB3 220 aa26.86■■□□□ 1.89
TM9SF3-201ENST00000371142 RAPGEF4Q8WZA2 1011 aa26.86■■□□□ 1.89
TM9SF3-201ENST00000371142 WASHC4Q2M389 1173 aa26.85■■□□□ 1.89
TM9SF3-201ENST00000371142 C22orf23Q9BZE7 217 aa26.84■■□□□ 1.89
TM9SF3-201ENST00000371142 FANCD2Q9BXW9 1451 aa26.84■■□□□ 1.89
TM9SF3-201ENST00000371142 HSP90AB4PQ58FF6 505 aa26.84■■□□□ 1.89
TM9SF3-201ENST00000371142 FBXO3Q9UK99 471 aa26.84■■□□□ 1.89
TM9SF3-201ENST00000371142 KIF7Q2M1P5 1343 aa26.83■■□□□ 1.89
TM9SF3-201ENST00000371142 ZNF771Q7L3S4 317 aaPredicted RBP26.83■■□□□ 1.88
TM9SF3-201ENST00000371142 KDM4AO75164 1064 aa26.82■■□□□ 1.88
TM9SF3-201ENST00000371142 RBM33Q96EV2 1170 aaKnown RBP26.82■■□□□ 1.88
TM9SF3-201ENST00000371142 ZNF644Q9H582 1327 aaPredicted RBP26.82■■□□□ 1.88
TM9SF3-201ENST00000371142 CCDC27Q2M243 656 aa26.82■■□□□ 1.88
TM9SF3-201ENST00000371142 NUCB2P80303 420 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms