RNA–Protein interactions for RNA: ENST00000370138.1

LRRC39-203, Transcript of leucine rich repeat containing 39, humanhuman

TSL 5 BASIC

Gene LRRC39, Length 1,466 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-203ENST00000370138 LOC100996750A0A140TA64 210 aa8.55□□□□□ -1.04
LRRC39-203ENST00000370138 HIC1Q14526 733 aa8.55□□□□□ -1.04
LRRC39-203ENST00000370138 NECTIN2Q92692 538 aa8.55□□□□□ -1.04
LRRC39-203ENST00000370138 KRTAP4-6Q9BYQ5 205 aa8.55□□□□□ -1.04
LRRC39-203ENST00000370138 LCE2BO14633 110 aa8.54□□□□□ -1.04
LRRC39-203ENST00000370138 SLC4A3P48751 1232 aa8.54□□□□□ -1.04
LRRC39-203ENST00000370138 SMYD5Q6GMV2 418 aa8.54□□□□□ -1.04
LRRC39-203ENST00000370138 PXYLP1Q8TE99 480 aa8.54□□□□□ -1.04
LRRC39-203ENST00000370138 PPP1R18Q6NYC8 613 aa8.53□□□□□ -1.04
LRRC39-203ENST00000370138 SLC10A3P09131 477 aa8.52□□□□□ -1.05
LRRC39-203ENST00000370138 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
LRRC39-203ENST00000370138 GNPATO15228 680 aa8.51□□□□□ -1.05
LRRC39-203ENST00000370138 TRAF7Q6Q0C0 670 aa8.51□□□□□ -1.05
LRRC39-203ENST00000370138 METTL3Q86U44 580 aaKnown RBP8.51□□□□□ -1.05
LRRC39-203ENST00000370138 PCDHB3Q9Y5E6 796 aa8.51□□□□□ -1.05
LRRC39-203ENST00000370138 OATP04181 439 aa8.51□□□□□ -1.05
LRRC39-203ENST00000370138 BLOC1S3Q6QNY0 202 aa8.51□□□□□ -1.05
LRRC39-203ENST00000370138 ZPR1O75312 459 aa8.5□□□□□ -1.05
LRRC39-203ENST00000370138 CFHP08603 1231 aa8.5□□□□□ -1.05
LRRC39-203ENST00000370138 VSIG10Q8N0Z9 540 aa8.49□□□□□ -1.05
LRRC39-203ENST00000370138 NLRP7Q8WX94 980 aa8.49□□□□□ -1.05
LRRC39-203ENST00000370138 PRR14Q9BWN1 585 aa8.49□□□□□ -1.05
LRRC39-203ENST00000370138 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.49□□□□□ -1.05
LRRC39-203ENST00000370138 LAPTM4AQ15012 233 aa8.48□□□□□ -1.05
LRRC39-203ENST00000370138 PRKD2Q9BZL6 878 aa8.48□□□□□ -1.05
LRRC39-203ENST00000370138 ACTN4O43707 911 aaKnown RBP8.47□□□□□ -1.05
LRRC39-203ENST00000370138 TLL1O43897 1013 aa8.47□□□□□ -1.05
LRRC39-203ENST00000370138 PHOX2BQ99453 314 aa8.47□□□□□ -1.05
LRRC39-203ENST00000370138 KMT5BQ4FZB7 885 aa8.46□□□□□ -1.05
LRRC39-203ENST00000370138 GPIHBP1Q8IV16 184 aa8.46□□□□□ -1.05
LRRC39-203ENST00000370138 DAXXQ9UER7 740 aaPredicted RBP8.43□□□□□ -1.06
LRRC39-203ENST00000370138 PUS10Q3MIT2 529 aaKnown RBP8.42□□□□□ -1.06
LRRC39-203ENST00000370138 RNF223E7ERA6 249 aa8.41□□□□□ -1.06
LRRC39-203ENST00000370138 GGCXP38435 758 aa8.41□□□□□ -1.06
LRRC39-203ENST00000370138 ZNF775Q96BV0 537 aaPredicted RBP8.41□□□□□ -1.06
LRRC39-203ENST00000370138 V9GY48 417 aaPredicted RBP8.41□□□□□ -1.06
LRRC39-203ENST00000370138 TMUB1Q9BVT8 246 aa8.4□□□□□ -1.06
LRRC39-203ENST00000370138 DDX11L8A8MPP1 907 aa8.39□□□□□ -1.07
LRRC39-203ENST00000370138 PPEF1O14829 653 aaPredicted RBP8.39□□□□□ -1.07
LRRC39-203ENST00000370138 GFRA3O60609 400 aa8.39□□□□□ -1.07
LRRC39-203ENST00000370138 S1PR4O95977 384 aa8.39□□□□□ -1.07
LRRC39-203ENST00000370138 RDH13Q8NBN7 331 aa8.39□□□□□ -1.07
LRRC39-203ENST00000370138 EMID1Q96A84 441 aaPredicted RBP8.39□□□□□ -1.07
LRRC39-203ENST00000370138 NR1I2O75469 434 aa8.38□□□□□ -1.07
LRRC39-203ENST00000370138 SCUBE3Q8IX30 993 aa8.38□□□□□ -1.07
LRRC39-203ENST00000370138 RSPH4AQ5TD94 716 aa8.38□□□□□ -1.07
LRRC39-203ENST00000370138 ADH1BP00325 375 aa8.37□□□□□ -1.07
LRRC39-203ENST00000370138 FUT2Q10981 343 aa8.36□□□□□ -1.07
LRRC39-203ENST00000370138 ZNF787Q6DD87 383 aa8.36□□□□□ -1.07
LRRC39-203ENST00000370138 MAP2K5Q13163 448 aa8.35□□□□□ -1.07
LRRC39-203ENST00000370138 GCGRP47871 477 aa8.34□□□□□ -1.07
LRRC39-203ENST00000370138 MORN1Q5T089 497 aa8.34□□□□□ -1.07
LRRC39-203ENST00000370138 TULP1O00294 542 aaPredicted RBP8.33□□□□□ -1.08
LRRC39-203ENST00000370138 IRF6O14896 467 aa8.33□□□□□ -1.08
LRRC39-203ENST00000370138 SLC19A1P41440 591 aa8.33□□□□□ -1.08
LRRC39-203ENST00000370138 ANKLE1Q8NAG6 615 aa8.33□□□□□ -1.08
LRRC39-203ENST00000370138 SLC6A16Q9GZN6 736 aa8.33□□□□□ -1.08
LRRC39-203ENST00000370138 NRG2O14511 850 aaPredicted RBP8.32□□□□□ -1.08
LRRC39-203ENST00000370138 PLA2G2CQ5R387 149 aa8.32□□□□□ -1.08
LRRC39-203ENST00000370138 SULF1Q8IWU6 871 aa8.32□□□□□ -1.08
LRRC39-203ENST00000370138 SPSB2Q99619 263 aa8.32□□□□□ -1.08
LRRC39-203ENST00000370138 PDZRN3Q9UPQ7 1066 aa8.32□□□□□ -1.08
LRRC39-203ENST00000370138 ATP6V1AP38606 617 aa8.32□□□□□ -1.08
LRRC39-203ENST00000370138 LIAT1Q6ZQX7 453 aa8.32□□□□□ -1.08
LRRC39-203ENST00000370138 TRIM67Q6ZTA4 783 aa8.32□□□□□ -1.08
LRRC39-203ENST00000370138 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.32□□□□□ -1.08
LRRC39-203ENST00000370138 THAP11Q96EK4 314 aa8.32□□□□□ -1.08
LRRC39-203ENST00000370138 SLC27A5Q9Y2P5 690 aa8.32□□□□□ -1.08
LRRC39-203ENST00000370138 CCDC102AQ96A19 550 aa8.31□□□□□ -1.08
LRRC39-203ENST00000370138 MDM2Q00987 491 aaPredicted RBP8.3□□□□□ -1.08
LRRC39-203ENST00000370138 SPRYD7Q5W111 196 aa8.3□□□□□ -1.08
LRRC39-203ENST00000370138 MINK1Q8N4C8 1332 aaPredicted RBP8.29□□□□□ -1.08
LRRC39-203ENST00000370138 CD46P15529 392 aa8.29□□□□□ -1.08
LRRC39-203ENST00000370138 FAM160A2Q8N612 972 aaPredicted RBP8.28□□□□□ -1.08
LRRC39-203ENST00000370138 RNF19BQ6ZMZ0 732 aa8.27□□□□□ -1.09
LRRC39-203ENST00000370138 PRDM9Q9NQV7 894 aa8.27□□□□□ -1.09
LRRC39-203ENST00000370138 ZNF598Q86UK7 904 aaKnown RBP8.26□□□□□ -1.09
LRRC39-203ENST00000370138 FMNL1O95466 1100 aaPredicted RBP8.26□□□□□ -1.09
LRRC39-203ENST00000370138 ZNF697Q5TEC3 545 aa8.26□□□□□ -1.09
LRRC39-203ENST00000370138 LMOD2Q6P5Q4 547 aa8.26□□□□□ -1.09
LRRC39-203ENST00000370138 BRICD5Q6PL45 260 aa8.26□□□□□ -1.09
LRRC39-203ENST00000370138 HLA-CQ95604 372 aa8.25□□□□□ -1.09
LRRC39-203ENST00000370138 FCF1Q9Y324 198 aaKnown RBP8.24□□□□□ -1.09
LRRC39-203ENST00000370138 SALL2Q9Y467 1007 aaPredicted RBP8.24□□□□□ -1.09
LRRC39-203ENST00000370138 KDM4AO75164 1064 aa8.23□□□□□ -1.09
LRRC39-203ENST00000370138 TNFRSF10AO00220 468 aa8.22□□□□□ -1.09
LRRC39-203ENST00000370138 GDF9O60383 454 aa8.22□□□□□ -1.09
LRRC39-203ENST00000370138 REPIN1Q9BWE0 567 aaKnown RBP8.22□□□□□ -1.09
LRRC39-203ENST00000370138 GPCPD1Q9NPB8 672 aa8.22□□□□□ -1.09
LRRC39-203ENST00000370138 PRR20EP86478 221 aa8.21□□□□□ -1.09
LRRC39-203ENST00000370138 PRR20CP86479 221 aa8.21□□□□□ -1.09
LRRC39-203ENST00000370138 PRR20DP86480 221 aa8.21□□□□□ -1.09
LRRC39-203ENST00000370138 PRR20BP86481 221 aa8.21□□□□□ -1.09
LRRC39-203ENST00000370138 PRR20AP86496 221 aa8.21□□□□□ -1.09
LRRC39-203ENST00000370138 GRIPAP1Q4V328 841 aa8.21□□□□□ -1.09
LRRC39-203ENST00000370138 FAM217BQ9NTX9 383 aaPredicted RBP8.21□□□□□ -1.09
LRRC39-203ENST00000370138 CLCN1P35523 988 aa8.2□□□□□ -1.1
LRRC39-203ENST00000370138 MSS51Q4VC12 460 aa8.2□□□□□ -1.1
LRRC39-203ENST00000370138 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
LRRC39-203ENST00000370138 HOXA2O43364 376 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms