RNA–Protein interactions for RNA: ENST00000370126.1

RTCA-202, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-202ENST00000370126 SLC26A8Q96RN1 970 aa32.89■■■□□ 2.86
RTCA-202ENST00000370126 RIMS2Q9UQ26 1411 aa32.88■■■□□ 2.85
RTCA-202ENST00000370126 NWD1Q149M9 1564 aa32.85■■■□□ 2.85
RTCA-202ENST00000370126 PLEKHG1Q9ULL1 1385 aa32.84■■■□□ 2.85
RTCA-202ENST00000370126 KCNA6P17658 529 aa32.84■■■□□ 2.85
RTCA-202ENST00000370126 CHGAP10645 457 aaKnown RBP32.81■■■□□ 2.84
RTCA-202ENST00000370126 HDGFP51858 240 aaKnown RBP32.81■■■□□ 2.84
RTCA-202ENST00000370126 SPHKAPQ2M3C7 1700 aa32.8■■■□□ 2.84
RTCA-202ENST00000370126 NAIPQ13075 1403 aa32.8■■■□□ 2.84
RTCA-202ENST00000370126 PPP1R15AO75807 674 aaPredicted RBP32.8■■■□□ 2.84
RTCA-202ENST00000370126 BCANQ96GW7 911 aa32.8■■■□□ 2.84
RTCA-202ENST00000370126 NKTRP30414 1462 aaKnown RBP32.8■■■□□ 2.84
RTCA-202ENST00000370126 ILDR2Q71H61 639 aa32.79■■■□□ 2.84
RTCA-202ENST00000370126 TMEM94Q12767 1356 aa32.79■■■□□ 2.84
RTCA-202ENST00000370126 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.76■■■□□ 2.83
RTCA-202ENST00000370126 SENP3Q9H4L4 574 aaPredicted RBP32.76■■■□□ 2.83
RTCA-202ENST00000370126 CHD2O14647 1828 aaKnown RBP32.75■■■□□ 2.83
RTCA-202ENST00000370126 PROSER2Q86WR7 435 aaPredicted RBP32.72■■■□□ 2.83
RTCA-202ENST00000370126 MED1Q15648 1581 aaPredicted RBP32.7■■■□□ 2.83
RTCA-202ENST00000370126 DIP2AQ14689 1571 aa32.7■■■□□ 2.82
RTCA-202ENST00000370126 HFM1A2PYH4 1435 aa32.69■■■□□ 2.82
RTCA-202ENST00000370126 ADAMTS13Q76LX8 1427 aa32.69■■■□□ 2.82
RTCA-202ENST00000370126 NUTM2DQ5VT03 806 aaPredicted RBP32.69■■■□□ 2.82
RTCA-202ENST00000370126 TBX22Q9Y458 520 aa32.69■■■□□ 2.82
RTCA-202ENST00000370126 RBM33Q96EV2 1170 aaKnown RBP32.67■■■□□ 2.82
RTCA-202ENST00000370126 TRPM2O94759 1503 aa32.65■■■□□ 2.82
RTCA-202ENST00000370126 CLTCL1P53675 1640 aa32.64■■■□□ 2.82
RTCA-202ENST00000370126 FAM135BQ49AJ0 1406 aa32.62■■■□□ 2.81
RTCA-202ENST00000370126 PIK3R4Q99570 1358 aa32.6■■■□□ 2.81
RTCA-202ENST00000370126 MSH6P52701 1360 aa32.59■■■□□ 2.81
RTCA-202ENST00000370126 ROBO1Q9Y6N7 1651 aa32.58■■■□□ 2.81
RTCA-202ENST00000370126 NRXN3Q9Y4C0 1643 aa32.58■■■□□ 2.81
RTCA-202ENST00000370126 SETBP1Q9Y6X0 1596 aa32.56■■■□□ 2.8
RTCA-202ENST00000370126 TRIM52Q96A61 297 aa32.55■■■□□ 2.8
RTCA-202ENST00000370126 KIF1BO60333 1816 aa32.55■■■□□ 2.8
RTCA-202ENST00000370126 SOCS7O14512 581 aa32.54■■■□□ 2.8
RTCA-202ENST00000370126 ZNF326Q5BKZ1 582 aaKnown RBP32.54■■■□□ 2.8
RTCA-202ENST00000370126 NCOA3Q9Y6Q9 1424 aa32.53■■■□□ 2.8
RTCA-202ENST00000370126 NEXMIFQ5QGS0 1516 aa32.52■■■□□ 2.8
RTCA-202ENST00000370126 PTPRUQ92729 1446 aa32.5■■■□□ 2.79
RTCA-202ENST00000370126 XRN1Q8IZH2 1706 aaKnown RBP32.47■■■□□ 2.79
RTCA-202ENST00000370126 SLC4A1APQ9BWU0 796 aaKnown RBP32.47■■■□□ 2.79
RTCA-202ENST00000370126 SLAIN2Q9P270 581 aa32.45■■■□□ 2.79
RTCA-202ENST00000370126 AMOTL2Q9Y2J4 779 aa32.45■■■□□ 2.79
RTCA-202ENST00000370126 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.44■■■□□ 2.78
RTCA-202ENST00000370126 C14orf37Q86TY3 774 aa32.42■■■□□ 2.78
RTCA-202ENST00000370126 PHF23Q9BUL5 403 aaPredicted RBP32.4■■■□□ 2.78
RTCA-202ENST00000370126 METP08581 1390 aa32.4■■■□□ 2.78
RTCA-202ENST00000370126 C19orf44Q9H6X5 657 aa32.38■■■□□ 2.77
RTCA-202ENST00000370126 PHLPP1O60346 1717 aa32.37■■■□□ 2.77
RTCA-202ENST00000370126 CADPS2Q86UW7 1296 aa32.35■■■□□ 2.77
RTCA-202ENST00000370126 ATF3P18847 181 aa32.33■■■□□ 2.77
RTCA-202ENST00000370126 PPLO60437 1756 aa32.32■■■□□ 2.77
RTCA-202ENST00000370126 SETD1AO15047 1707 aaKnown RBP32.32■■■□□ 2.76
RTCA-202ENST00000370126 FOXD1Q16676 465 aa32.31■■■□□ 2.76
RTCA-202ENST00000370126 DCCP43146 1447 aa32.31■■■□□ 2.76
RTCA-202ENST00000370126 RPGRIP1LQ68CZ1 1315 aa32.3■■■□□ 2.76
RTCA-202ENST00000370126 COL16A1Q07092 1604 aaPredicted RBP32.29■■■□□ 2.76
RTCA-202ENST00000370126 VGFO15240 615 aaPredicted RBP32.29■■■□□ 2.76
RTCA-202ENST00000370126 MPHOSPH9Q99550 1183 aa32.26■■■□□ 2.75
RTCA-202ENST00000370126 AHDC1Q5TGY3 1603 aaPredicted RBP32.26■■■□□ 2.75
RTCA-202ENST00000370126 CCDC144AA2RUR9 1427 aa32.25■■■□□ 2.75
RTCA-202ENST00000370126 JCADQ9P266 1359 aa32.23■■■□□ 2.75
RTCA-202ENST00000370126 NALCNQ8IZF0 1738 aa32.23■■■□□ 2.75
RTCA-202ENST00000370126 RGS17Q9UGC6 210 aaPredicted RBP32.22■■■□□ 2.75
RTCA-202ENST00000370126 ADGRL3Q9HAR2 1447 aa32.22■■■□□ 2.75
RTCA-202ENST00000370126 PTCH1Q13635 1447 aa32.2■■■□□ 2.75
RTCA-202ENST00000370126 SETD5Q9C0A6 1442 aa32.2■■■□□ 2.75
RTCA-202ENST00000370126 MST1RQ04912 1400 aa32.19■■■□□ 2.74
RTCA-202ENST00000370126 SPATA31E1Q6ZUB1 1445 aa32.19■■■□□ 2.74
RTCA-202ENST00000370126 BRINP3Q76B58 766 aa32.18■■■□□ 2.74
RTCA-202ENST00000370126 ACIN1Q9UKV3 1341 aaKnown RBP32.18■■■□□ 2.74
RTCA-202ENST00000370126 PRAG1Q86YV5 1406 aa32.17■■■□□ 2.74
RTCA-202ENST00000370126 IFT172Q9UG01 1749 aa32.17■■■□□ 2.74
RTCA-202ENST00000370126 ASXL1Q8IXJ9 1541 aa32.16■■■□□ 2.74
RTCA-202ENST00000370126 ROBO2Q9HCK4 1378 aa32.14■■■□□ 2.74
RTCA-202ENST00000370126 SHPRHQ149N8 1683 aa32.13■■■□□ 2.73
RTCA-202ENST00000370126 NHSL1Q5SYE7 1610 aa32.11■■■□□ 2.73
RTCA-202ENST00000370126 ADGRF5Q8IZF2 1346 aa32.1■■■□□ 2.73
RTCA-202ENST00000370126 RGL3Q3MIN7 710 aa32.1■■■□□ 2.73
RTCA-202ENST00000370126 ANKRD30BQ9BXX2 1392 aa32.09■■■□□ 2.73
RTCA-202ENST00000370126 RAB3GAP2Q9H2M9 1393 aa32.08■■■□□ 2.73
RTCA-202ENST00000370126 SPATA31A6Q5VVP1 1343 aa32.06■■■□□ 2.72
RTCA-202ENST00000370126 LRP6O75581 1613 aa32.06■■■□□ 2.72
RTCA-202ENST00000370126 C1orf167Q5SNV9 1468 aa32.03■■■□□ 2.72
RTCA-202ENST00000370126 POTEAQ6S8J7 498 aa32.02■■■□□ 2.72
RTCA-202ENST00000370126 PIK3C2GO75747 1445 aa32.01■■■□□ 2.72
RTCA-202ENST00000370126 TECPR2O15040 1411 aa31.98■■■□□ 2.71
RTCA-202ENST00000370126 KNDC1Q76NI1 1749 aa31.97■■■□□ 2.71
RTCA-202ENST00000370126 LAMC1P11047 1609 aa31.97■■■□□ 2.71
RTCA-202ENST00000370126 CDC42BPGQ6DT37 1551 aa31.95■■■□□ 2.71
RTCA-202ENST00000370126 LRPPRCP42704 1394 aaKnown RBP31.94■■■□□ 2.7
RTCA-202ENST00000370126 DDX17Q92841 729 aaKnown RBP31.94■■■□□ 2.7
RTCA-202ENST00000370126 MYOM2P54296 1465 aa31.92■■■□□ 2.7
RTCA-202ENST00000370126 NRXN1Q9ULB1 1477 aa31.92■■■□□ 2.7
RTCA-202ENST00000370126 MEX3CQ5U5Q3 659 aaKnown RBP31.92■■■□□ 2.7
RTCA-202ENST00000370126 LRRC59Q96AG4 307 aaKnown RBP31.91■■■□□ 2.7
RTCA-202ENST00000370126 STK26Q9P289 416 aa31.91■■■□□ 2.7
RTCA-202ENST00000370126 ABCC11Q96J66 1382 aa31.91■■■□□ 2.7
RTCA-202ENST00000370126 TMEM132EQ6IEE7 984 aa31.9■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms