RNA–Protein interactions for RNA: ENST00000368409.7

EFNA4-202, Transcript of ephrin A4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EFNA4, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA4-202ENST00000368409 CHD2O14647 1828 aaKnown RBP25.37■■□□□ 1.65
EFNA4-202ENST00000368409 NKTRP30414 1462 aaKnown RBP25.37■■□□□ 1.65
EFNA4-202ENST00000368409 TMEM94Q12767 1356 aa25.34■■□□□ 1.65
EFNA4-202ENST00000368409 KCNA6P17658 529 aa25.34■■□□□ 1.65
EFNA4-202ENST00000368409 SLC26A8Q96RN1 970 aa25.33■■□□□ 1.65
EFNA4-202ENST00000368409 PLEKHG1Q9ULL1 1385 aa25.31■■□□□ 1.64
EFNA4-202ENST00000368409 ROBO1Q9Y6N7 1651 aa25.31■■□□□ 1.64
EFNA4-202ENST00000368409 RIMS2Q9UQ26 1411 aa25.3■■□□□ 1.64
EFNA4-202ENST00000368409 FAM135BQ49AJ0 1406 aa25.29■■□□□ 1.64
EFNA4-202ENST00000368409 SENP3Q9H4L4 574 aaPredicted RBP25.28■■□□□ 1.64
EFNA4-202ENST00000368409 DIP2AQ14689 1571 aa25.26■■□□□ 1.63
EFNA4-202ENST00000368409 SPHKAPQ2M3C7 1700 aa25.26■■□□□ 1.63
EFNA4-202ENST00000368409 PROSER2Q86WR7 435 aaPredicted RBP25.24■■□□□ 1.63
EFNA4-202ENST00000368409 NUP155O75694 1391 aa25.21■■□□□ 1.63
EFNA4-202ENST00000368409 PPP1R15AO75807 674 aaPredicted RBP25.21■■□□□ 1.63
EFNA4-202ENST00000368409 BCANQ96GW7 911 aa25.21■■□□□ 1.63
EFNA4-202ENST00000368409 PHF23Q9BUL5 403 aaPredicted RBP25.21■■□□□ 1.63
EFNA4-202ENST00000368409 HDGFP51858 240 aaKnown RBP25.2■■□□□ 1.62
EFNA4-202ENST00000368409 RBM33Q96EV2 1170 aaKnown RBP25.2■■□□□ 1.62
EFNA4-202ENST00000368409 ADAMTS13Q76LX8 1427 aa25.2■■□□□ 1.62
EFNA4-202ENST00000368409 MSH6P52701 1360 aa25.18■■□□□ 1.62
EFNA4-202ENST00000368409 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.17■■□□□ 1.62
EFNA4-202ENST00000368409 PHLPP1O60346 1717 aa25.17■■□□□ 1.62
EFNA4-202ENST00000368409 ITGAEP38570 1179 aa25.16■■□□□ 1.62
EFNA4-202ENST00000368409 TBX22Q9Y458 520 aa25.16■■□□□ 1.62
EFNA4-202ENST00000368409 NRXN3Q9Y4C0 1643 aa25.15■■□□□ 1.62
EFNA4-202ENST00000368409 TRPM2O94759 1503 aa25.14■■□□□ 1.62
EFNA4-202ENST00000368409 CHGAP10645 457 aaKnown RBP25.14■■□□□ 1.62
EFNA4-202ENST00000368409 NCOA3Q9Y6Q9 1424 aa25.13■■□□□ 1.61
EFNA4-202ENST00000368409 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.13■■□□□ 1.61
EFNA4-202ENST00000368409 PPARGC1BQ86YN6 1023 aaKnown RBP25.13■■□□□ 1.61
EFNA4-202ENST00000368409 PIK3R4Q99570 1358 aa25.13■■□□□ 1.61
EFNA4-202ENST00000368409 RRBP1Q9P2E9 1410 aaKnown RBP25.12■■□□□ 1.61
EFNA4-202ENST00000368409 SETBP1Q9Y6X0 1596 aa25.1■■□□□ 1.61
EFNA4-202ENST00000368409 XRN1Q8IZH2 1706 aaKnown RBP25.1■■□□□ 1.61
EFNA4-202ENST00000368409 COL16A1Q07092 1604 aaPredicted RBP25.09■■□□□ 1.61
EFNA4-202ENST00000368409 NUTM2DQ5VT03 806 aaPredicted RBP25.09■■□□□ 1.61
EFNA4-202ENST00000368409 CLTCL1P53675 1640 aa25.08■■□□□ 1.61
EFNA4-202ENST00000368409 SLAIN2Q9P270 581 aa25.08■■□□□ 1.61
EFNA4-202ENST00000368409 RGS17Q9UGC6 210 aaPredicted RBP25.07■■□□□ 1.6
EFNA4-202ENST00000368409 KIF1BO60333 1816 aa25.07■■□□□ 1.6
EFNA4-202ENST00000368409 PTPRUQ92729 1446 aa25.04■■□□□ 1.6
EFNA4-202ENST00000368409 NAIPQ13075 1403 aa25.03■■□□□ 1.6
EFNA4-202ENST00000368409 NEXMIFQ5QGS0 1516 aa25.02■■□□□ 1.6
EFNA4-202ENST00000368409 AHDC1Q5TGY3 1603 aaPredicted RBP25.02■■□□□ 1.6
EFNA4-202ENST00000368409 SHPRHQ149N8 1683 aa24.98■■□□□ 1.59
EFNA4-202ENST00000368409 JCADQ9P266 1359 aa24.98■■□□□ 1.59
EFNA4-202ENST00000368409 DCCP43146 1447 aa24.97■■□□□ 1.59
EFNA4-202ENST00000368409 C14orf37Q86TY3 774 aa24.97■■□□□ 1.59
EFNA4-202ENST00000368409 C19orf44Q9H6X5 657 aa24.97■■□□□ 1.59
EFNA4-202ENST00000368409 AMOTL2Q9Y2J4 779 aa24.97■■□□□ 1.59
EFNA4-202ENST00000368409 CADPS2Q86UW7 1296 aa24.96■■□□□ 1.59
EFNA4-202ENST00000368409 HFM1A2PYH4 1435 aa24.95■■□□□ 1.59
EFNA4-202ENST00000368409 SETD1AO15047 1707 aaKnown RBP24.95■■□□□ 1.59
EFNA4-202ENST00000368409 NALCNQ8IZF0 1738 aa24.93■■□□□ 1.58
EFNA4-202ENST00000368409 ATF3P18847 181 aa24.93■■□□□ 1.58
EFNA4-202ENST00000368409 ZNF326Q5BKZ1 582 aaKnown RBP24.92■■□□□ 1.58
EFNA4-202ENST00000368409 METP08581 1390 aa24.92■■□□□ 1.58
EFNA4-202ENST00000368409 NHSL1Q5SYE7 1610 aa24.91■■□□□ 1.58
EFNA4-202ENST00000368409 POTEAQ6S8J7 498 aa24.91■■□□□ 1.58
EFNA4-202ENST00000368409 PPLO60437 1756 aa24.9■■□□□ 1.58
EFNA4-202ENST00000368409 LRP6O75581 1613 aa24.9■■□□□ 1.58
EFNA4-202ENST00000368409 ASXL1Q8IXJ9 1541 aa24.89■■□□□ 1.57
EFNA4-202ENST00000368409 MST1RQ04912 1400 aa24.86■■□□□ 1.57
EFNA4-202ENST00000368409 ADGRL3Q9HAR2 1447 aa24.86■■□□□ 1.57
EFNA4-202ENST00000368409 SPATA31A6Q5VVP1 1343 aa24.86■■□□□ 1.57
EFNA4-202ENST00000368409 BRINP3Q76B58 766 aa24.85■■□□□ 1.57
EFNA4-202ENST00000368409 PTCH1Q13635 1447 aa24.81■■□□□ 1.56
EFNA4-202ENST00000368409 PRAG1Q86YV5 1406 aa24.81■■□□□ 1.56
EFNA4-202ENST00000368409 TRIM52Q96A61 297 aa24.79■■□□□ 1.56
EFNA4-202ENST00000368409 LAMC1P11047 1609 aa24.79■■□□□ 1.56
EFNA4-202ENST00000368409 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
EFNA4-202ENST00000368409 IFT172Q9UG01 1749 aa24.77■■□□□ 1.56
EFNA4-202ENST00000368409 SLC4A1APQ9BWU0 796 aaKnown RBP24.76■■□□□ 1.55
EFNA4-202ENST00000368409 VGFO15240 615 aaPredicted RBP24.75■■□□□ 1.55
EFNA4-202ENST00000368409 RPGRIP1LQ68CZ1 1315 aa24.75■■□□□ 1.55
EFNA4-202ENST00000368409 ROBO2Q9HCK4 1378 aa24.73■■□□□ 1.55
EFNA4-202ENST00000368409 MEX3CQ5U5Q3 659 aaKnown RBP24.72■■□□□ 1.55
EFNA4-202ENST00000368409 C1orf167Q5SNV9 1468 aa24.7■■□□□ 1.55
EFNA4-202ENST00000368409 ZNF772Q68DY9 489 aaPredicted RBP24.68■■□□□ 1.54
EFNA4-202ENST00000368409 CCDC144AA2RUR9 1427 aa24.67■■□□□ 1.54
EFNA4-202ENST00000368409 CDC42BPGQ6DT37 1551 aa24.67■■□□□ 1.54
EFNA4-202ENST00000368409 SPATA31E1Q6ZUB1 1445 aa24.66■■□□□ 1.54
EFNA4-202ENST00000368409 PNPLA6Q8IY17 1366 aa24.66■■□□□ 1.54
EFNA4-202ENST00000368409 KNDC1Q76NI1 1749 aa24.65■■□□□ 1.54
EFNA4-202ENST00000368409 LRRC59Q96AG4 307 aaKnown RBP24.65■■□□□ 1.54
EFNA4-202ENST00000368409 FOXD1Q16676 465 aa24.64■■□□□ 1.54
EFNA4-202ENST00000368409 NUTM2BA6NNL0 878 aaPredicted RBP24.63■■□□□ 1.53
EFNA4-202ENST00000368409 NUTM2EB1AL46 878 aaPredicted RBP24.63■■□□□ 1.53
EFNA4-202ENST00000368409 NUTM2AQ8IVF1 878 aaPredicted RBP24.63■■□□□ 1.53
EFNA4-202ENST00000368409 DDX17Q92841 729 aaKnown RBP24.63■■□□□ 1.53
EFNA4-202ENST00000368409 CDK12Q9NYV4 1490 aaPredicted RBP24.61■■□□□ 1.53
EFNA4-202ENST00000368409 COL22A1Q8NFW1 1626 aaPredicted RBP24.6■■□□□ 1.53
EFNA4-202ENST00000368409 TECPR2O15040 1411 aa24.6■■□□□ 1.53
EFNA4-202ENST00000368409 ADGRF5Q8IZF2 1346 aa24.59■■□□□ 1.53
EFNA4-202ENST00000368409 ANKRD30BQ9BXX2 1392 aa24.58■■□□□ 1.53
EFNA4-202ENST00000368409 AFF2P51816 1311 aa24.58■■□□□ 1.52
EFNA4-202ENST00000368409 MPHOSPH9Q99550 1183 aa24.57■■□□□ 1.52
EFNA4-202ENST00000368409 PIK3C2GO75747 1445 aa24.56■■□□□ 1.52
EFNA4-202ENST00000368409 ORAI2Q96SN7 254 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms